Nucleotide Global Alignment

Description

• Query: TRCN0000472100
• Subject: XM_017027260.2
• Aligned Length: 1614
• Identities: 1031
• Gaps: 423

Alignment

Query    1  ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTC  296
                                             .||.||.||.||||||||||||||.|||||||||.||||||
Sbjct    1  ---------------------------------ATGAAGACTTTTCCAGAAGCAGGACCACATGAAGGGTGGTC  41

Query  297  CTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCTCAGT  370
            |||||||||.|||||||||.|||||||||..||.|||||||||.||||.|||||||.||||||.|.||||||||
Sbjct   42  CTGCCAGCAGATCTGGGAAGAAATTGCAAGTGATTTAACCAGGCCTCAAGACTCTACCATAAAGAGCTCTCAGT  115

Query  371  TCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCATACAGGACAGAAACCTTCC  444
            ||||||||.|.|||||||.||.||||||||||||.|.|||||||.|.|.|||.||.||||||||||||||||||
Sbjct  116  TCTTTGAACAGGGTGATGCCCACTCCCAGGTTGAGGAAGGACTATCTATAATGCACACAGGACAGAAACCTTCC  189

Query  445  CAGGGTGGGAAGTGTAAACAGTCCTTCAGTGATGTTCCCATCTTTGATCTTCCTCAGCAGTTATACTCAGAAGA  518
            .|..||||||||||||||||.||||||||||||.|..||||||||||||||||||||||..||..|||||.|||
Sbjct  190  AATTGTGGGAAGTGTAAACAATCCTTCAGTGATATGTCCATCTTTGATCTTCCTCAGCAAATACGCTCAGCAGA  263

Query  519  GAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCATCAGAGAGTCC  592
            |||||||.||.|.|||||||||||||||||||||.||||||||||||||||.||||||.|||||||||||||||
Sbjct  264  GAAGTCTCATTCCTGTGATGAGTGTGGAAAAAGCTTCTGTTACATCTCAGCGCTTCATATTCATCAGAGAGTCC  337

Query  593  ACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCTGCAAACTCAT  666
            ||.||||||||||||||||||.||||||.||||||||.||||||||.|||||.||.|.||||||||||||||||
Sbjct  338  ACCTGGGAGAGAAACTCTTTAAGTGTGACGTGTGTGGTAAGGAATTCAGTCAGAGTTTACATCTGCAAACTCAT  411

Query  667  CAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACT  740
            |||||||||||.||||||||||||||.|||||||||||.||||||||||.|||.|||||..|||||||||||||
Sbjct  412  CAGAGAGTCCATACTGGAGAGAAACCTTTCAAATGTGAACAATGTGGGAGAGGCTTCAGATGTAGATCAGCACT  485

Query  741  TAATGTTCATCATAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTCATTCATG  814
            ||..||||||...||||||||||..||||||||||.|||.|.|||||||||||||||||.||||||||||||||
Sbjct  486  TACAGTTCATTGCAAATTACACATGGGAGAGAAACATTATAATTGTGAGGCATGTGGGAGGGCCTTCATTCATG  559

Query  815  ATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATATGTGGTAAGACC  888
            |||.|||||||.||.|||||.|||||||.||.||.||||||||.||||||||||||||.||||||.||..||.|
Sbjct  560  ATTTCCAGCTTCAGAAACATCAGAGAATTCACACAGGGGAGAAGCCATTCAAATGTGAGATATGTAGTGTGAGC  633

Query  889  TTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGTGTGATACATG  962
            |||..|.||||||||||                                                         
Sbjct  634  TTCCGTCTTAGGTCAAG---------------------------------------------------------  650

Query  963  TGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAACCGTACAGAT  1036
                                       .||||||||||||||..||||||||||||||.|||||||..||||..
Sbjct  651  ---------------------------TCTTAATAGGCATTGTGTGGTCCACACAGGAAAGAAACCAAACAGCA  697

Query 1037  GTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACACAGGAGAGAAA  1110
            .||.|.|.|.||||||||||||.|||.|||||||.|||||.|.||||||||||..|.|||||||||||||||||
Sbjct  698  CTGGGGAATATGGAAAAGGCTTCATTCGTAGGCTGGATTTGTGTAAGCATCAGACGATCCACACAGGAGAGAAA  771

Query 1111  CCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGCGAGTCCACAG  1184
            ||||||||||||||||||||||||||||||||||||.|||||||.|..|||||||.|||||||||||||||||.
Sbjct  772  CCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGACGGTCCTCCTATCTTTTGATCCATCAGCGAGTCCACAC  845

Query 1185  TGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACAACTGTCTTCCCATCAGA  1258
            ||||                                                                      
Sbjct  846  TGGA----------------------------------------------------------------------  849

Query 1259  GATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTATGTTACTAAGTTTAATCTTGAC  1332
                          |||||||||||.||||||||..|||||||||||.||||..|||||||||....|||||||
Sbjct  850  --------------GAAAAGCCATACAAATGTGACAAGTGTGGGAAGAGCTACATTACTAAGTCAGGTCTTGAC  909

Query 1333  TTGCACCAGAGGGTCCACACGGGAGAGAGACCTTATAATTGTAAGGAATGTGGGAAGAACTTTAGCCGGGCCTC  1406
            ||||||||.||.|.||||||.|||||||||||||||||.|||.|.||.||||||||||.||||||.|.||||||
Sbjct  910  TTGCACCATAGAGCCCACACAGGAGAGAGACCTTATAACTGTGATGACTGTGGGAAGAGCTTTAGACAGGCCTC  983

Query 1407  AAGTATTTTGAATCATAAGAGACTCCACTGCCAGAAAAAACCATTCAAATGTGAGGACTGTGGAAAGAGGCTTG  1480
            |||||||||||||||||||||||||||.||||..|||||||||||||||||||||||.||||||||||.|||||
Sbjct  984  AAGTATTTTGAATCATAAGAGACTCCATTGCCGAAAAAAACCATTCAAATGTGAGGATTGTGGAAAGAAGCTTG  1057

Query 1481  TACACAGGACATACCGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCATCCAAATGTGAGGATTGTGGG  1554
            ||.||.||.||||||||||||||||.|..|.|.||.|.|||||.|||||.||||||||||||||.||.||||||
Sbjct 1058  TATACCGGTCATACCGTAAAGACCAACAAAAAAACCACAGTGGAGAAAATCCATCCAAATGTGAAGACTGTGGG  1131

Query 1555  AGACGCTACAAGAGGCGCTTGAATCTGGATATACTTTTATCATTATTTCTAAATGACACA  1614
            |..|||||||||||||||||||||||.||||||.||||||||||||||.||||||||||.
Sbjct 1132  AAGCGCTACAAGAGGCGCTTGAATCTTGATATAATTTTATCATTATTTTTAAATGACACG  1191