Nucleotide Global Alignment
Description
- Query:
- TRCN0000472112
- Subject:
- NR_146171.2
- Aligned Length:
- 3658
- Identities:
- 571
- Gaps:
- 3067
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGAGGCGCAGTTACTGATATAGCCAAGGTGGGACACTACTGGAGGGAGCTAGAAGGGATCAGCCAGCCATGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCAGTTCAGGTACTTGGCATTGCTAAGCTCAGAACAGGACTTGCCAGTGTCTAGATGAAAAAGAGGAGAGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAAGAGGGATAACCAATTGGCTGGCAAAGTAACAAATGAAAAGTAACCTGACTCTATTGACCTGCTTAACCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCATGGGGGGGAAGGATGGAAAGGAGCAGCTGTTTGCTTTGAAACGGTGGAACAGTTTTGCAGCCTTAGAAAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCATGTAACATACCTAACCAAAGACAGCGGACTCTGTCAACAACAGGAGAAGCTCTATACGAAATTCTTGGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCATAAGGGAGCATCAAATGAAGAAATTAAGAAAACCTACAGGCTGGAAAATCCCTTCACCTAAAGGCACCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCTCCTCAGCTACTACCAACAAGGAGTGTTGGGAGCCTCAGAAGCGGGAGACAAACCAAACAAACCAAAGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCGTAAAGACTCTGAAAAGTAGATTGTTATTGGAACCACTCACAAAAGTAGGCTAGAACCTGCATGCTAAACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAAAGGGGGCTGCCTGCTAAAATAAAACAACTTAAATAGAACCCATTATCTCCCAACATGATAACCAAAATATC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGATACAAACAAAATGACCCATCCTACAAAGAAGCAAGAAAATCACAACTTGAATAAGAAAAGACAATCAGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACTCCTGTGCTGAGATGAACCAGATGTTGGAACTATCTGAAAAGCATTTTAAAGTAACCATCATAGGCCGGGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCGGTGGCTCTCGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCTGGCGGATCACGAGGTCAGGAGATTGAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCATCCTGGCTAACACAGTGAAAGCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCTTAGTGGCAGGCGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAAGGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTGTCTCAAAAAATAAATAAATAAATAAAGTAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCATCATAAAAAATTCAACAAGTAACGACAAATTCTCTTGAAGCAAGTAAAAAAAAATGGAAATTCTCAGTGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAAATAGGAATTAACAAAAAAGAACCAAATGGAAACTATAGAACCAAAAAATAACACAAATAATAAAACTAACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGATGAGCTTAATAGTACAGTGGAGATGACAGAGAATAGAAATTGAGGACAGATCAATAGAATGTTCCCGATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAACAACCGATAAACAATAAACTGAAAACAGAGTCTCAGAAACCTGTGGGACAATAACAAAGATCCAACATTTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TAGCATTGACATCCTAGAAGGAGAAGAGTGAAACAATGGGACTAAAAGAGTACTAAAAGAAGTAATGGCTGGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATTCCCCACATTTGGCAAAAAATAGAAACCTACAGATTCAAGAGGCTGAGAGAACTCCGACAGGATAAACCCAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCAATCAATGCCAAGAAACATTATAATTAAATTTCTGAAAACTACAGACAAAGAAAAAAATTTGAAAGCAGCC 1628
Query 1 -----------------------------------ATGGCATGTAACATA---CCTAACCAAAG--ACAGCGGA 34
||||| |.|||| |..|.|.|||| |||||.|.
Sbjct 1629 AGGGAGAAACAATGCATGGCCAAACACCCATTTGAATGGC----AGCATATTTCTCATCTAAAGCAACAGCAGC 1698
Query 35 CT-------------------------------------------CTGTCAAC------------AACAGGAGA 53
|| |||||||| |.|.||.||
Sbjct 1699 CTGAAGGAAGTGACAAAAGATTTTTCAACTGATGAAAGAGAAGAACTGTCAACAGAAAATTCTGTATCTGGTGA 1772
Query 54 AGCTCTAT---AC-----------GAAATTCTTGGTCT-GCATAAGGG---------------------AGC-- 89
|.||.||| || |||||.| |.||| .|||||.|| |||
Sbjct 1773 AACTATATTTCACGAGTGAATGGGGAAATAC--GTTCTCACATAAAGGGAATCTAAAAGAATTGTCACTAGCAG 1844
Query 90 ATC------------------------------------------AAATG---AAGAAA-----TTA------- 106
||| ||||| |||||| |||
Sbjct 1845 ATCTCTTCTTAAAGAATGGCTAAAGGAAGTTCTTCGAAAGAAAGGAAATGATAAAGAAAGGATCTTAGACGATC 1918
Query 107 ----------------------AGAAA----ACCTACAGAAAATTGGCCCTGAAACACCATCCAGACAAGAATC 154
||||| |..||..||||||||||||||||||||||||||||||||||||
Sbjct 1919 AGGAAGAAGGAAAGAACAAGGGAGAAAGCAGAAATATGGAAAATTGGCCCTGAAACACCATCCAGACAAGAATC 1992
Query 155 CAGATGATCCAGCTGCTACTGAGAAGTTTAAAGAAATCAACAACGCCCACGCAATACTTACCGACATTTCAAAG 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993 CAGATGATCCAGCTGCTACTGAGAAGTTTAAAGAAATCAACAACGCCCACGCAATACTTACCGACATTTCAAAG 2066
Query 229 AGAAGCATATACGACAAGTACGGATCGCTGGGACTCTACGTGGCCGAGCAGTTTGGAGACGAAAACGTTAACAC 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067 AGAAGCATATACGACAAGTACGGATCGCTGGGACTCTACGTGGCCGAGCAGTTTGGAGACGAAAACGTTAACAC 2140
Query 303 CTACTTCATGCTGTCGAGCTGGTGGGCAAAGGCCCTGTTTGTCATCGTTGGCCTCTTGACGGGCTGCTACTTTT 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2141 CTACTTCATGCTGTCGAGCTGGTGGGCAAAGGCCCTGTTTGTCATCGTTGGCCTCTTGACGGGCTGCTACTTTT 2214
Query 377 GCTGCTGCCTGTGCTGCTGCTGCAACTGCTGCTGTGGACACTGCCGGCCCGAGTCATCAGTGCCAGAAGAGGAC 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2215 GCTGCTGCCTGTGCTGCTGCTGCAACTGCTGCTGTGGACACTGCCGGCCCGAGTCATCAGTGCCAGAAGAGGAC 2288
Query 451 TTCTATGTGTCCCCAGAGGATCTGGAGGAGCAGATCAAGTCTGACATGGAAAAAGATGTGGACTTTCCAGTTTT 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2289 TTCTATGTGTCCCCAGAGGATCTGGAGGAGCAGATCAAGTCTGACATGGAAAAAGATGTGGACTTTCCAGTTTT 2362
Query 525 TCTCCAGCCTACAAATGCAAATGAGAAAACACAGCTAATCAAAGAAGGATCTCGAAGTTATTGCACAGACTCT- 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2363 TCTCCAGCCTACAAATGCAAATGAGAAAACACAGCTAATCAAAGAAGGATCTCGAAGTTATTGCACAGACTCTT 2436
Query 598 -------------------------------------------------------------------------- 597
Sbjct 2437 GATATTGAGCCCTCAGAGAGTCCACAGTCCCTCCTCTCAGTTCAGTCTTGTCTCCAGATGGTCGTAGGGGAGCG 2510
Query 598 -------------------------------------------------------------------------- 597
Sbjct 2511 TGTGGGGCATAAAGTGCTGTGAACTTTTCCATCTTGTTGTTTTATTTTTGGGTTAGGAAAACATGATTGCTATA 2584
Query 598 -------------------------------------------------------------------------- 597
Sbjct 2585 TAATTTTCTCAGTATGCAGACTTTCTCTCTGAGTAGAATTTCTTATGAAACACATTCAATTTGGGTGAATAAAG 2658
Query 598 -------------------------------------------------------------------------- 597
Sbjct 2659 GCCTGAAGAGTTATTTTACCCTCCTTGCCTGATGTAGGACAGTGGAATTGTACAGCCTTTATGAACCTGCCCTT 2732
Query 598 -------------------------------------------------------------------------- 597
Sbjct 2733 TATGTGTGGCAGATCTGATTCCTAACTGACCAAAGTAATATTCCAGAACAAAAGCCACTTTTCTTACATTTAAC 2806
Query 598 -------------------------------------------------------------------------- 597
Sbjct 2807 ACAATATTCATATCTACCACGAACATGATCATCAAAATATATGAGAACTTATAAAGAGTTTTTGTGTGTGGAGC 2880
Query 598 -------------------------------------------------------------------------- 597
Sbjct 2881 CTCTTCCGTGTCAATATTCAATAAAGTTATAGAAATGTTTCAAGAGCCAGAAAGGGATGATTTTTTTTTAAATC 2954
Query 598 -------------------------------------------------------------------------- 597
Sbjct 2955 ACATTTTTAAGGTATATTTTTGGAACATTAAAAATTGGCATTTACTGAAAACTGGAAACCAGGAAGAAACAGGT 3028
Query 598 -------------------------------------------------------------------------- 597
Sbjct 3029 TTTGTGTGTACTTTTAGATTGGCTTAAAAACAAAACAAAACAAAACTTCAACCTGGTTAAATGTTGTAAGTGAA 3102
Query 598 -------------------------------------------------------------------------- 597
Sbjct 3103 CCAGAAAATCATTCTGAGCCTGAACCCGCCCCATCAGCATGTTGATCATTTTCTAGTAAAATAATTTTTGTATA 3176
Query 598 -------------------------------------------------------------------------- 597
Sbjct 3177 ACTGGCTCAGATTAGCCAGACTAAGGGAAAAAAAACAGATGAAGGGGTAGAACTCTATACTCTAGAGCCTAAAT 3250
Query 598 -------------------------------------------------------------------------- 597
Sbjct 3251 TTACACCAAAACATGTATCACCTCATTTTTGTTAAAATTAGTTGCCTTGACCAGAAATTGCTCAGCTCTGTGCA 3324
Query 598 -------------------------------------------------------------------------- 597
Sbjct 3325 TGTTACACAATTTAAGCCCAGAGGTCATCTCTGCATTTGCTTGTTTGATTCTTGTATTTATTATGTGGTAGAAA 3398
Query 598 -------------------------------------------------------------------------- 597
Sbjct 3399 CCATGTGCTATTTCTAAAATACTATGGCAGAAAAAGTGTTCGTTTTTCTAGCTCTTTCTTACTTTTTTATATAA 3472
Query 598 -------------------------------------------------------------------------- 597
Sbjct 3473 TATTGCATTTTCAAGATCTTGTTATGTTTTTATATAATATTGTATAAAATGCCTTTATCTTTTTTCTTGTTTCT 3546
Query 598 -------------------------------------------------------------------------- 597
Sbjct 3547 TATTCCCACCCAAAAAATTATAGTTAATTGCTGCTAAATATATATTGTAAGTGAGAATTAGTGTTATAGCTCTG 3620
Query 598 -------------------------------- 597
Sbjct 3621 ATAGTTCTGAGGTCATTAAAATTCCACTCTAA 3652
