Nucleotide Global Alignment

Description

Query:
TRCN0000472121
Subject:
NR_028399.1
Aligned Length:
2628
Identities:
776
Gaps:
1776

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACGTGAGAGGAGACTTCCGGCCACTGCGTTGTAGTCGGCCCGGCTGCAAAGCGTTTTTCTGCAGGCTGTTTTCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGGTTCCCTCGGCCTGTACCTCGCGCACTCCTCTTGCTCCAGGTCCTTCAGTCTCCGCTCGTCTCACCGTAGG  148

Query    1  ----------ATGAGCAACAAAGAAGGATCAGGAGGGTTCAGGAAAAGGAAGCATGACAATTTCCCACATAACC  64
                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTGTGACGACATGAGCAACAAAGAAGGATCAGGAGGGTTCAGGAAAAGGAAGCATGACAATTTCCCACATAACC  222

Query   65  AAAGAAGAGAAGGGAAGGATGTTAATTCATCTTCACCCGTGATGTTGGCCTTTAAATCATTTCAGCAGGAACTT  138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAAGAAGAGAAGGGAAGGATGTTAATTCATCTTCACCCGTGATGTTGGCCTTTAAATCATTTCAGCAGGAACTT  296

Query  139  GATGCAAGGCATGACAAATATGAGAGACTTGTGAAACTTAGTCGGGATATAACTGTTGAAAGTAAAAGGACAAT  212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GATGCAAGGCATGACAAATATGAGAGACTTGTGAAACTTAGTCGGGATATAACTGTTGAAAGTAAAAGGACAAT  370

Query  213  TTTTCTCCTCCATAGGATTACAAGTGCTCCTGATATGGAAGATATATTGACTGAATCAGAAATTAAATTGGATG  286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTTTCTCCTCCATAGGATTACAAGTGCTCCTGATATGGAAGATATATTGACTGAATCAGAAATTAAATTGGATG  444

Query  287  GTGTCAGACAAAAGATATTCCAGGTAGCCCAAGAGCTATCAGGGGAAGATATGCATCAGTTCCATCGAGCCATT  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTGTCAGACAAAAGATATTCCAGGTAGCCCAAGAGCTATCAGGGGAAGATATGCATCAGTTCCATCGAGCCATT  518

Query  361  ACTACAGGACTACAGGAATATGTGGAAGCTGTCTCTTTTCAACACTTCATCAAAACACGATCATTAATTAGTAT  434
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACTACAGGACTACAGGAATATGTGGAAGCTGTCTCTTTTCAACACTTCATCAAAACACGATCATTAATTAGTAT  592

Query  435  GGATGAAATTAATAAACAATTGATATTTACGACTGAAGACAATGGGAAAGAAAATAAAAC--------------  494
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct  593  GGATGAAATTAATAAACAATTGATATTTACGACTGAAGACAATGGGAAAGAAAATAAAACTAAGTTTACAGGCA  666

Query  495  ---TCC--CTC-------CTCT---GAT----GC--ACAGGATAAGC-----------AGTTTGGTACT-TGGA  535
               |||  |||       ||||   |||    ||  ||||   ||||           |.|||..|||| |.||
Sbjct  667  AGATCCTACTCACAGAGGCTCTTGGGATCAAGGCTGACAG---AAGCTCCATCTGAAGACTTTTATACTATAGA  737

Query  536  GACTG----AGAG------------------------------------------------------------T  545
            |.|.|    ||||                                                            |
Sbjct  738  GGCAGAAAAAGAGTGATGAATCAAGCACTGGCTTCTAAAGCTTCCGCCCAGATGGGAAGCATATCTCCTCTGCT  811

Query  546  CACA----CCTGTCGA---------------------TTACCTTC--------TGGGA---------------G  571
            ||||    ||||.|.|                     |.|.||||        |||||               |
Sbjct  812  CACATTTCCCTGACCAAAGCCAGTCACATGGCCATCCTCAGCTTCAGAGAGGTTGGGAAGGCATTCCCACTATG  885

Query  572  TGGCTG----------AC--------------------------------TTAACTG---------GAGA--AT  592
            ||.|||          ||                                |||||.|         ||||  ||
Sbjct  886  TGTCTGGATGCCAGCAACTCAGAAATATTTGCCTTACAGAGACCTCACCATTAACAGCATCTGCAAGAGAAGAT  959

Query  593  TGATGCGGATG-----TGTATTAACAGTG-------TGGGGAATGGGGAC-----------------------A  631
            |.|.||..|.|     |.||.|.||.|||       ||.||||...||||                       |
Sbjct  960  TAAAGCACACGATTACTTTACTCACTGTGTAACACATGAGGAACATGGACGAGATGGGAAAAAGGCAGCCGGGA  1033

Query  632  TTG-ATACCCCCTTTGAAGTGAGCCAGTTTTT-----------------ACGTCAGG------TTTATGA----  677
            ||| .||||.||  ||.||.|.||     |||                 ||| .|||      |..||||    
Sbjct 1034  TTGCTTACCACC--TGCAGCGTGC-----TTTCGGAGGCGGCGGCTGGCACG-GAGGCCGGGCTACATGAGAAG  1099

Query  678  ------------TGGGTT----TTCATT-------CATTGGCAACACTGGACC--TTAC-----GAGGTTTCT-  720
                        ||||.|    |||.||       ||.|||..||||||..||  ||.|     |.|||.||| 
Sbjct 1100  CTCGACAGGGCCTGGGATCGGGTTCCTTTCCCCAGCAGTGGGCACACTGTTCCGGTTCCCAGGAGGGGTGTCTG  1173

Query  721  --AAGAAG---------------------------CTGTAT-ACCTTGAAAC-AAAG----TTTGG--------  751
              .||.||                           |.||.| .||||||..| |.||    .||||        
Sbjct 1174  GCGAGGAGTCCCACCACTCGGAGTCCAGGGCCAGACAGTGTGGCCTTGACTCGAGAGGCCTCTTGGTCCGGAGC  1247

Query  752  -------CCAA-AGTGGAGAATGC-----TTGTTATGCCT---TGAAAG-------------------------  784
                   |||| ||||.||.| ||     .|||.|  |||   |||.||                         
Sbjct 1248  CCTGTTTCCAAGAGTGCAGCA-GCCCCTACTGTGA--CCTCTGTGAGAGGAACCTCGGCGCACTTTGGGATTCA  1318

Query  785  --TCAGAGG-GTCA-GAAATTCCAAAACA----TA--------TGT------------------TGGCAG-ATG  823
              ||||||| |.|| .|.|||.|...|||    ||        |||                  |||||| |.|
Sbjct 1319  GCTCAGAGGTGGCACCAGATTGCCTGACAGGCTTAGCTGGCCGTGTGGCCCTGGGAGTGCTGGGTGGCAGCAAG  1392

Query  824  TGTTTTC----------AGTTAAAACAGA-------------------------------AATGATAGATCAAG  856
            .||||.|          ||||    |.||                               |..|||.||.||||
Sbjct 1393  AGTTTGCAGCCATGGATAGTT----CTGAGACCCTGGACGCCAGCTGGGAGGCAGCCTGCAGCGATGGAGCAAG  1462

Query  857  AAG----AGGGCA------TTTCT--------------------------------------------------  870
            ..|    .|||||      |.|||                                                  
Sbjct 1463  GCGTGTCCGGGCAGCAGGCTCTCTGCCATCAGCAGAGTTGAGTAGCAACAGCTGCAGCCCTGGCTGTGGCCCTG  1536

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 1537  AGGTCCCCCCAACCCCTCCTGGCTCTCACAGTGCCTTTACCTCAAGCTTTAGCTTTATTCGGCTCTCGCTTGGC  1610

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 1611  TCTGCCGGGGAACGTGGAGAAGCAGAAGGCTGCCCACCATCCAGAGAGGCTGAGTCCCATTGCCAGAGCCCCCA  1684

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 1685  GGAGATGGGAGCCAAAGCTGCCAGCTTGGACGGGCCTCACGAGGACCCGCGATGTCTCTCTCGGCCCTTCAGTC  1758

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 1759  TCTTGGCTACACGGGTCTCTGCAGACTTGGCCCAGGCCGCAAGGAACAGCTCCAGGCCAGAGCGTGACATGCAT  1832

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 1833  TCTTTACCAGACATGGACCCTGGCTCCTCCAGTTCTCTGGATCCCTCACTGGCTGGCTGTGGTGGTGATGGGAG  1906

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 1907  CAGCGGCTCAGGGGATGCCCACTCTTGGGACACCCTGCTCAGGAAATGGGAGCCAGTGCTGCGGGACTGCCTGC  1980

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 1981  TGAGAAACCGGAGGCAGATGGAGGTAATATCCTTAAGATTAAAACTTCAGAAACTTCAGGAAGATGCAGTTGAG  2054

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 2055  AATGATGATTATGATAAAGGTGAGTTTTAATTTGTTTATTGATTGTTTTGTCATCATGTCCCAATTTTCTTTCC  2128

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 2129  ATCTTTACTCATATCTACCTTTTGAATCCCAAAAGAATTGTACAATCTGTTCCTCTGATCATCTCTACCAGGGA  2202

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 2203  ATAGTTGACTCTTTTACAGCATTATTGTTTTGTAGATTTCAAAGTACTTCATGAACATTAATCCTTTGGGTTAT  2276

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 2277  AAATATAACCTTATCAATTGTCCAGAAACACTTAGCATACTCACACAATAAAAATTATATTAGCTTGCCACCTG  2350

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 2351  TCTGCCCATGGTGTGATGTATCTATAATCCACTTGTTCATAAAAAATATTCGTCTGACACCTATGATATGCTAG  2424

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 2425  GGAATATGGGAGACAATAGGAAAGTAAGACAGACATGGTATCTGCCCTTGTGATGCCAGTAAACTTAAGCCTTC  2498

Query  871  --------------------------------------------------------------------------  870
                                                                                      
Sbjct 2499  ATGGGGCTCTCTGACTTCATAATTTCCAGAACCAGAGATAGGAAATGAGGTGAATTTGAGAAATGTCAGACTGT  2572

Query  871  --------------------------------------  870
                                                  
Sbjct 2573  GCCAAAGGGGGTCACATGCATCAAATTTCCACATACAT  2610

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