Nucleotide Global Alignment
Description
- Query:
- TRCN0000472167
- Subject:
- XR_001779042.1
- Aligned Length:
- 2735
- Identities:
- 718
- Gaps:
- 1927
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAAGCCACGGCCAGTCGTCGTTTGGCTGGTGCGCTTGAGCCCATTGGCCAGGGGGTCCACGAAACGCCGCTTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTCAGTCCTTGGCTTCCATTGGACCATATCCTTAAGCCCCTCCTACTTCTGTTTGTCATTGGCCGAAAGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTACATCAAATGGAGAAGCAACGCTCTCTGGAGTTTATTCCTGGGATGCTGATGGAGTATGTCAACTTTCCATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCCTTTATTCAGCTTCCGTCATCCGCCTCAGCAGGCGCTGAAGGTTCCAGAAGCCCTAGCCTTTGCTTCCTCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCAGAAAATCCATCCCTTTTCAGACGCTCCCAGAGCCGTCTGTCAACTCAGACGTTGCCGTTCCCGCAGGCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGATGCGCTACCTTGTGACGTCACCGAGAGAGGAGGCGGGCTCTTCCCTGCCACCAGAAGTTGTCCTCTTTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGATTGGTCACTGGAAGGCGTCTATCAAGACGCGTTGCCTTTCCCGTGCGCGCTGAGTGTGGCGTCCTTGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTGCGAGACCGAGGCTCCTATAGGGTTCGCAGCTCGCCCGCCCCTTCCATCGGGGACTTGGATTCCGCTTGCC 592
Query 1 ---------------------------------------------------------------------ATGGC 5
|||||
Sbjct 593 CCAGGCGGGCGGCTGTCGAATCCGGAGGAGGAGCTCAAGGACGGCGTCTGGGGTTGCGCAGGTGGGAAGATGGC 666
Query 6 GGCGGCGTCTGTCTCTGCGGCTTCTGGTTCTCACTTGTCGAACAGCTTTGCTGAGCCATCAAGGTCTAATGGAA 79
|||.||.||.|||||.||||||||||.||||||.||.||||.|..|.|.|||||.|||||||||||||||||||
Sbjct 667 GGCAGCCTCGGTCTCGGCGGCTTCTGATTCTCAGTTTTCGAGCGTCCTAGCTGAACCATCAAGGTCTAATGGAA 740
Query 80 GCATGGTTCGGCATTCTTCATCTCCATATGTAGTATATCCTTCGGATAAGCCTTTCCTTAATAGTGATCTACGA 153
..||||||||.||||||||.||||||||||||.|.|||||..|.|||||||||||||||||.||||||||..||
Sbjct 741 ATATGGTTCGTCATTCTTCGTCTCCATATGTATTGTATCCACCTGATAAGCCTTTCCTTAACAGTGATCTGAGA 814
Query 154 CGCTCCCCAAGTAAGCCTACACTTGCCTATCCAGAAAGCAACAGCAGAGCCATATTTTCTGCTCTTAAGAATCT 227
||||||||||.||||||.|||.||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CGCTCCCCAAATAAGCCCACATTTGCCTATCCGGAAAGCAACAGCAGAGCCATATTTTCTGCTCTTAAGAATCT 888
Query 228 TCAAGATAAGATTCGACGCTTGGAACTTGAGAGGATTCAGGCAGAAGAAAGTGTGAAAACCTTGTCTAGAGAAA 301
|||||||||||||||||||.|||||||.||.||||||||||||||||||||||||||||||||||||||.||||
Sbjct 889 TCAAGATAAGATTCGACGCCTGGAACTGGAAAGGATTCAGGCAGAAGAAAGTGTGAAAACCTTGTCTAGGGAAA 962
Query 302 CAATTGAATATAAGAAAGTACTGGATGAACAGATACAAGAAAGGGAGAATTCAAAGAATGAGGAATCAAAGCAC 375
|.|||||.||.|||||||||.|||||||||||||.|||||.||||||||.|||||||||||.||||||||||||
Sbjct 963 CCATTGAGTACAAGAAAGTATTGGATGAACAGATCCAAGAGAGGGAGAACTCAAAGAATGAAGAATCAAAGCAC 1036
Query 376 AATCAAGAACTGACATCTCAGTTGTTAGCTGCAGAAAATAAATGCAATCTATTAGAAAAACAATTGGAATACAT 449
||||||||||||.||||.||||||.|||||||||||||||||||.|||||..||||||||||||||||||||||
Sbjct 1037 AATCAAGAACTGGCATCCCAGTTGGTAGCTGCAGAAAATAAATGTAATCTTCTAGAAAAACAATTGGAATACAT 1110
Query 450 GCGAAATATGATAAAGCATGCCGAAATGGAGAGGACATCTGTCTTAGAGAAACAAGTTTCCCTAGAAAGAGAAC 523
|||||||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||.|||||||||||||
Sbjct 1111 GCGAAATATGATAAAGCATGCAGAAATGGAGAGGACATCTGTGTTAGAAAAGCAGGTTTCTCTAGAAAGAGAAC 1184
Query 524 GACAACATGATCAAACACATGTTCAGAGCCAACTTGAAAAATTGGATCTTCTTGAACAGGAGTATAACAAACTT 597
|.||.|||||||||||.||||||||||||||.||.||||||.|||||||||||||||||||.||.||||||||.
Sbjct 1185 GGCAGCATGATCAAACCCATGTTCAGAGCCAGCTGGAAAAACTGGATCTTCTTGAACAGGAATACAACAAACTC 1258
Query 598 ACCACAATGCAGGCCCTTGCAGAAAAAAAAATGCAAGAGTTGGAAGCAAAACTCCATGAAGAAGAACAGGAAAG 671
|||.|.|||||||||||||||||||||||.|||||.||||||||..|.|||||||.|||||||||.||||||||
Sbjct 1259 ACCGCCATGCAGGCCCTTGCAGAAAAAAAGATGCAGGAGTTGGAGTCCAAACTCCGTGAAGAAGAGCAGGAAAG 1332
Query 672 GAAACGCATGCAAGCTAAGGCAGCTGAGTTGCAGACTGGTCTAGAAACAAATAGACTTATCTTTGAAGATAAGG 745
|||.||.|||||.||...||||||.|||||.||||.||||||||||.|||||||||||||.||||||||||||.
Sbjct 1333 GAAGCGGATGCAGGCCCGGGCAGCAGAGTTACAGAGTGGTCTAGAAGCAAATAGACTTATTTTTGAAGATAAGA 1406
Query 746 CAACTCCGTGTGTT---CCCAATGCA--AGAAGAATTAAAAAAAAGAAGTCAAAACCACCAGA----AAAGGTG 810
|.|||.|.|||||| .||| ||| ||||.|||.|||||||||||||||||||||||||| ||||||.
Sbjct 1407 CTACTTCATGTGTTTCAACCA--GCACTAGAAAAATAAAAAAAAAGAAGTCAAAACCACCAGAAAAGAAAGGTT 1478
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1479 CTAGGACCTATTTTGGTGCACAGCCACATTACAGATTGTGCTTAGGTGATATGCCTTTTGTTGCTGGAACGTGA 1552
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1553 TCATCAGCAGCTTACTAAACTCATACAGGAATCACCAACTGTGGAACTAAAAGACAACCTGGAGTGTGAATTGG 1626
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1627 AGGCATTAGTGGGAAGAATGGAAGCGAAGGCCAATCAGATAACTAAAGTTCGAAAATACCAAGCCCAGCTGGAG 1700
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1701 AAACAAAACATAGATAAGCAGAAGAAGGAATTAAAAGCTAACAAAAAGACTCTTGATGAAGAAGGGAACAGCAG 1774
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1775 CGGTCGTTCATCTGGAGTCCCAAGGACCGCAAGTAAGAAGGATCTGGCCAAACAGAGACCTGGAGAAAAAAGCA 1848
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1849 GGAAAAATCTTCAGTTACTGAAGGACATGCAGACCATACAGAATTCACTGCAGAGCAGTAATCTGTGTTGGGAT 1922
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1923 TACTGACACCAGGTCATAAATGATGTACCTCACTGGTCATAAACGATGTACGTACTGGACATGAGCAGACTTTC 1996
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1997 CAGGTCTCATGCTTGCTAAGCTGCCATTACTGGCAGGTGTTAGGGGCCAAGCTTCATTACAGTCTATTGTGCTA 2070
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2071 TGTAGCACAACTGATGGAGATGGAGTTCTGCGGCAGAGAAGCCTCACTGTCTTTGAATTTGCTGTACTCATTCA 2144
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2145 CTGCACTTTGTAAACAAATGACCAGTTTTTTACTCATGGGTGTGTTTTTTAAACTAGGTATATATGTAAATTGG 2218
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2219 GTTTGAAAATTCAGAATATGAGATAGTCCCCATAGTCAGTGCTTGAAGTCTTGTTTTTTAAATCTTCCCACAGC 2292
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2293 ATGAAGTGACCACTACTCTCCCTTCTCCAGATGACCATTAAATGTACTGTTTTCAAGAAGACTTTGTTTTGCTT 2366
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2367 TGGTATTTTAGACATTGATCAATCATAAATTCACTTAAGTCAGTTATCCATGAAATATGTCACAATGTCTTCAG 2440
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2441 AAAAACTATATAAACAGTTGTTACTGAAGTAAATGAAATTTTGGAATAAAGAATGAGAACGTGGGTATTGTAAA 2514
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2515 ATGTACACGTTTACAGTTTTTAGACAGTATCTATTTGTAATCATGTTAAGCACTGTTTAATCTTGACTTAAGAG 2588
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2589 AAGCTCATGCTTTTAGCATACAGTATGTGAATTGAATACACACATCTATCATGCCAATGTAAATTATTTAACTT 2662
Query 811 ----------------------------------------------------------------------- 810
Sbjct 2663 TGAGTAGATCGACATGTTATAATCTTTATAAATTTGGTACTTCAAATCAATAAAGCAGTTTTTAAACTTTG 2733
