Nucleotide Global Alignment

Description

Query:
TRCN0000472167
Subject:
XR_001779042.1
Aligned Length:
2735
Identities:
718
Gaps:
1927

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAAGCCACGGCCAGTCGTCGTTTGGCTGGTGCGCTTGAGCCCATTGGCCAGGGGGTCCACGAAACGCCGCTTTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTCAGTCCTTGGCTTCCATTGGACCATATCCTTAAGCCCCTCCTACTTCTGTTTGTCATTGGCCGAAAGGTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTACATCAAATGGAGAAGCAACGCTCTCTGGAGTTTATTCCTGGGATGCTGATGGAGTATGTCAACTTTCCATT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTCCTTTATTCAGCTTCCGTCATCCGCCTCAGCAGGCGCTGAAGGTTCCAGAAGCCCTAGCCTTTGCTTCCTCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCAGAAAATCCATCCCTTTTCAGACGCTCCCAGAGCCGTCTGTCAACTCAGACGTTGCCGTTCCCGCAGGCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGCGATGCGCTACCTTGTGACGTCACCGAGAGAGGAGGCGGGCTCTTCCCTGCCACCAGAAGTTGTCCTCTTTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTGATTGGTCACTGGAAGGCGTCTATCAAGACGCGTTGCCTTTCCCGTGCGCGCTGAGTGTGGCGTCCTTGTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTTGCGAGACCGAGGCTCCTATAGGGTTCGCAGCTCGCCCGCCCCTTCCATCGGGGACTTGGATTCCGCTTGCC  592

Query    1  ---------------------------------------------------------------------ATGGC  5
                                                                                 |||||
Sbjct  593  CCAGGCGGGCGGCTGTCGAATCCGGAGGAGGAGCTCAAGGACGGCGTCTGGGGTTGCGCAGGTGGGAAGATGGC  666

Query    6  GGCGGCGTCTGTCTCTGCGGCTTCTGGTTCTCACTTGTCGAACAGCTTTGCTGAGCCATCAAGGTCTAATGGAA  79
            |||.||.||.|||||.||||||||||.||||||.||.||||.|..|.|.|||||.|||||||||||||||||||
Sbjct  667  GGCAGCCTCGGTCTCGGCGGCTTCTGATTCTCAGTTTTCGAGCGTCCTAGCTGAACCATCAAGGTCTAATGGAA  740

Query   80  GCATGGTTCGGCATTCTTCATCTCCATATGTAGTATATCCTTCGGATAAGCCTTTCCTTAATAGTGATCTACGA  153
            ..||||||||.||||||||.||||||||||||.|.|||||..|.|||||||||||||||||.||||||||..||
Sbjct  741  ATATGGTTCGTCATTCTTCGTCTCCATATGTATTGTATCCACCTGATAAGCCTTTCCTTAACAGTGATCTGAGA  814

Query  154  CGCTCCCCAAGTAAGCCTACACTTGCCTATCCAGAAAGCAACAGCAGAGCCATATTTTCTGCTCTTAAGAATCT  227
            ||||||||||.||||||.|||.||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CGCTCCCCAAATAAGCCCACATTTGCCTATCCGGAAAGCAACAGCAGAGCCATATTTTCTGCTCTTAAGAATCT  888

Query  228  TCAAGATAAGATTCGACGCTTGGAACTTGAGAGGATTCAGGCAGAAGAAAGTGTGAAAACCTTGTCTAGAGAAA  301
            |||||||||||||||||||.|||||||.||.||||||||||||||||||||||||||||||||||||||.||||
Sbjct  889  TCAAGATAAGATTCGACGCCTGGAACTGGAAAGGATTCAGGCAGAAGAAAGTGTGAAAACCTTGTCTAGGGAAA  962

Query  302  CAATTGAATATAAGAAAGTACTGGATGAACAGATACAAGAAAGGGAGAATTCAAAGAATGAGGAATCAAAGCAC  375
            |.|||||.||.|||||||||.|||||||||||||.|||||.||||||||.|||||||||||.||||||||||||
Sbjct  963  CCATTGAGTACAAGAAAGTATTGGATGAACAGATCCAAGAGAGGGAGAACTCAAAGAATGAAGAATCAAAGCAC  1036

Query  376  AATCAAGAACTGACATCTCAGTTGTTAGCTGCAGAAAATAAATGCAATCTATTAGAAAAACAATTGGAATACAT  449
            ||||||||||||.||||.||||||.|||||||||||||||||||.|||||..||||||||||||||||||||||
Sbjct 1037  AATCAAGAACTGGCATCCCAGTTGGTAGCTGCAGAAAATAAATGTAATCTTCTAGAAAAACAATTGGAATACAT  1110

Query  450  GCGAAATATGATAAAGCATGCCGAAATGGAGAGGACATCTGTCTTAGAGAAACAAGTTTCCCTAGAAAGAGAAC  523
            |||||||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||.|||||||||||||
Sbjct 1111  GCGAAATATGATAAAGCATGCAGAAATGGAGAGGACATCTGTGTTAGAAAAGCAGGTTTCTCTAGAAAGAGAAC  1184

Query  524  GACAACATGATCAAACACATGTTCAGAGCCAACTTGAAAAATTGGATCTTCTTGAACAGGAGTATAACAAACTT  597
            |.||.|||||||||||.||||||||||||||.||.||||||.|||||||||||||||||||.||.||||||||.
Sbjct 1185  GGCAGCATGATCAAACCCATGTTCAGAGCCAGCTGGAAAAACTGGATCTTCTTGAACAGGAATACAACAAACTC  1258

Query  598  ACCACAATGCAGGCCCTTGCAGAAAAAAAAATGCAAGAGTTGGAAGCAAAACTCCATGAAGAAGAACAGGAAAG  671
            |||.|.|||||||||||||||||||||||.|||||.||||||||..|.|||||||.|||||||||.||||||||
Sbjct 1259  ACCGCCATGCAGGCCCTTGCAGAAAAAAAGATGCAGGAGTTGGAGTCCAAACTCCGTGAAGAAGAGCAGGAAAG  1332

Query  672  GAAACGCATGCAAGCTAAGGCAGCTGAGTTGCAGACTGGTCTAGAAACAAATAGACTTATCTTTGAAGATAAGG  745
            |||.||.|||||.||...||||||.|||||.||||.||||||||||.|||||||||||||.||||||||||||.
Sbjct 1333  GAAGCGGATGCAGGCCCGGGCAGCAGAGTTACAGAGTGGTCTAGAAGCAAATAGACTTATTTTTGAAGATAAGA  1406

Query  746  CAACTCCGTGTGTT---CCCAATGCA--AGAAGAATTAAAAAAAAGAAGTCAAAACCACCAGA----AAAGGTG  810
            |.|||.|.||||||   .|||  |||  ||||.|||.||||||||||||||||||||||||||    ||||||.
Sbjct 1407  CTACTTCATGTGTTTCAACCA--GCACTAGAAAAATAAAAAAAAAGAAGTCAAAACCACCAGAAAAGAAAGGTT  1478

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 1479  CTAGGACCTATTTTGGTGCACAGCCACATTACAGATTGTGCTTAGGTGATATGCCTTTTGTTGCTGGAACGTGA  1552

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 1553  TCATCAGCAGCTTACTAAACTCATACAGGAATCACCAACTGTGGAACTAAAAGACAACCTGGAGTGTGAATTGG  1626

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 1627  AGGCATTAGTGGGAAGAATGGAAGCGAAGGCCAATCAGATAACTAAAGTTCGAAAATACCAAGCCCAGCTGGAG  1700

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 1701  AAACAAAACATAGATAAGCAGAAGAAGGAATTAAAAGCTAACAAAAAGACTCTTGATGAAGAAGGGAACAGCAG  1774

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 1775  CGGTCGTTCATCTGGAGTCCCAAGGACCGCAAGTAAGAAGGATCTGGCCAAACAGAGACCTGGAGAAAAAAGCA  1848

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 1849  GGAAAAATCTTCAGTTACTGAAGGACATGCAGACCATACAGAATTCACTGCAGAGCAGTAATCTGTGTTGGGAT  1922

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 1923  TACTGACACCAGGTCATAAATGATGTACCTCACTGGTCATAAACGATGTACGTACTGGACATGAGCAGACTTTC  1996

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 1997  CAGGTCTCATGCTTGCTAAGCTGCCATTACTGGCAGGTGTTAGGGGCCAAGCTTCATTACAGTCTATTGTGCTA  2070

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 2071  TGTAGCACAACTGATGGAGATGGAGTTCTGCGGCAGAGAAGCCTCACTGTCTTTGAATTTGCTGTACTCATTCA  2144

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 2145  CTGCACTTTGTAAACAAATGACCAGTTTTTTACTCATGGGTGTGTTTTTTAAACTAGGTATATATGTAAATTGG  2218

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 2219  GTTTGAAAATTCAGAATATGAGATAGTCCCCATAGTCAGTGCTTGAAGTCTTGTTTTTTAAATCTTCCCACAGC  2292

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 2293  ATGAAGTGACCACTACTCTCCCTTCTCCAGATGACCATTAAATGTACTGTTTTCAAGAAGACTTTGTTTTGCTT  2366

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 2367  TGGTATTTTAGACATTGATCAATCATAAATTCACTTAAGTCAGTTATCCATGAAATATGTCACAATGTCTTCAG  2440

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 2441  AAAAACTATATAAACAGTTGTTACTGAAGTAAATGAAATTTTGGAATAAAGAATGAGAACGTGGGTATTGTAAA  2514

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 2515  ATGTACACGTTTACAGTTTTTAGACAGTATCTATTTGTAATCATGTTAAGCACTGTTTAATCTTGACTTAAGAG  2588

Query  811  --------------------------------------------------------------------------  810
                                                                                      
Sbjct 2589  AAGCTCATGCTTTTAGCATACAGTATGTGAATTGAATACACACATCTATCATGCCAATGTAAATTATTTAACTT  2662

Query  811  -----------------------------------------------------------------------  810
                                                                                   
Sbjct 2663  TGAGTAGATCGACATGTTATAATCTTTATAAATTTGGTACTTCAAATCAATAAAGCAGTTTTTAAACTTTG  2733

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