Nucleotide Global Alignment

Description

Query:
TRCN0000472181
Subject:
XR_001756625.2
Aligned Length:
1151
Identities:
407
Gaps:
703

Alignment

Query    1  ------------------------ATGCGGA----------TTC-TTATATTGAGTTTGGATACA--GCTGGAA  37
                                    .|||.||          ||| ||..|.|||      |.|||  .|.|.||
Sbjct    1  AAGTTTTCTCCAATACTATATGGCCTGCAGACCGCTCAGCTTTCATTCCAGTGA------AAACATTCCAGAAA  68

Query   38  AAACCACCATCTTGTATAAAT------TG----------AAGCTGGGGGAGACTGTG-----CCTGCCGTCC--  88
            ||||     || ||.||.|||      ||          .||||..||..||.||||     |||||.|.||  
Sbjct   69  AAAC-----TC-TGAATCAATCCCAGGTGTTTCTCCAATCAGCTCAGGATGATTGTGTGTTACCTGCTGCCCAG  136

Query   89  ------------CTACAG--------------TAGGTTTCTGTGTGGAGACA-------GTAGA----------  119
                        ||.|||              |||||.||..|||     ||       |||||          
Sbjct  137  CTAGTGACACCTCTCCAGGCCTCTGACTTAGCTAGGTCTCCATGT-----CACTCCACCGTAGACTCCCCGCCT  205

Query  120  -----ATATAAAAA-------------TAACACCTTCGCTGTC-----TGGG-ATGTTGGCA-GCCACTTCAAA  168
                 .|.|..|||             .|||||||.|     |     |||| |.|.||.|| |.|||.||.||
Sbjct  206  TCTTCTTTTGCAAAGCCTCGGACACCCAAACACCTAC-----CAAAAGTGGGTAGGGTGCCAGGACACCTCCAA  274

Query  169  ------------------ATCAGACCT--CTGTG----------GCAG----------------------CATT  190
                              |.||.||||  .||||          ||||                      ||||
Sbjct  275  GTGTAAGTGGGGCTCTCCAGCACACCTGGATGTGGAGGTGTGATGCAGAGTGGTGGCTGCTCGTGACACTCATT  348

Query  191  T------TTTC----CAGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGCCAGCGG  254
            |      ||||    |          ||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  349  TCACCCCTTTCTGTGC----------AGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCGCTTGCCAGCGG  412

Query  255  GGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCC  328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  413  GGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCC  486

Query  329  ATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCG  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  487  ATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCG  560

Query  403  TGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGTGGT  476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  561  TGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGTGGT  634

Query  477  ---AAAG-------------------------------------------------------------------  480
               ..||                                                                   
Sbjct  635  TCGTGAGCCACACATCTCCCCACACCAAGCTCCTCCATACAAGACCTCGGACTGCATCATGTAAATGCTTTTTC  708

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  709  AGGGGCAAAATCTAGAGAATCTGAAATGAGCTATCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGG  782

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  783  GGTCACTGGCACAAATGATGAGGCATCTCCTGGAAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGAT  856

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  857  GCCAGTTAATTACTTTGAATGCTCCTCCACCAAGCCAAGGCCAGACTCCTGCAATCATAGGATGGCAACACCAC  930

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  931  CTCTAAAGCACAGAACTTCAGGCTTTGCTTCGGAAGTGGCACCATGGTCTCTTCATTTTCCCTTTCTTCAAGGT  1004

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1005  CAGAAAACTGAAGCTGTTAGGAGTTTTAGTGTTAAGTTCCTTCCGAGGATGTTAATTAGGCTTCAAACTGTTTT  1078

Query  481  -----------------------------------------  480
                                                     
Sbjct 1079  GTTCTGAGAAATAAAAACTAAACTCCAGTCATTCAAGCTAA  1119