Nucleotide Global Alignment
Description
- Query:
- TRCN0000472194
- Subject:
- XR_001755202.2
- Aligned Length:
- 3870
- Identities:
- 1288
- Gaps:
- 2560
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAACTTCCGGAAGGAGGCGGAAGAGCTTCTCGGCTCTAGGCTCTGGAGTCCCGGGAGCAGTGAGGGGCCACCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCACAGGAAAGGGCCGCTAGGGGAGGGCCGGGTGCACTCGGGGTGTCTGGGCCGCGGGTCTGAGGGATGAG 148
Query 1 --------ATGGCCAGCGACGGGGCCAGGAAGCAATTCTGGAAGCGCAGCAACAGCAAGCTCCCGGGCAG---- 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAGGGGCCATGGCCAGCGACGGGGCCAGGAAGCAATTCTGGAAGCGCAGCAACAGCAAGCTCCCGGGCAGCATC 222
Query 63 -----------------------------------------------------TTTGCTCAGGTCCACGGCCAA 83
|||||||||||||||||||||
Sbjct 223 CAGCACGTGTATGGTGCCCAGCACCCCCCCTTTGATCCACTGTTACATGGCACTTTGCTCAGGTCCACGGCCAA 296
Query 84 GATGCCGACCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGAGCAATACCAGCGATGCCT 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATGCCGACCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGAGCAATACCAGCGATGCCT 370
Query 158 GGGACGCTGGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAACTCCGAGGTGGTCATGGAG 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGGACGCTGGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAACTCCGAGGTGGTCATGGAG 444
Query 232 ACGGCCAACCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCAGGAGGGGCCAGGGCTTCA 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACGGCCAACCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCAGGAGGGGCCAGGGCTTCA 518
Query 306 GCAGAAGCCCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGCTGGTGAAGTCGGTCAGTG 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCAGAAGCCCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGCTGGTGAAGTCGGTCAGTG 592
Query 380 AGAGCCACACGTCCTGTCCTGCA--------------------------------------------------- 402
|||||||||||||||||||||||
Sbjct 593 AGAGCCACACGTCCTGTCCTGCAGAAAGTGCCAGCGATGCCGCCCCTCTGCAGAGGTCCCAGTCTCTCCCACAC 666
Query 403 -------------------------------------------------------------------------- 402
Sbjct 667 TCGGCCACCGTCACGCTGGGTGGCACATCTGACCCCAGCACTCTCAGCAGCTCAGCGCTGAGCGAAAGAGAGGC 740
Query 403 ----------------------------------------------------GAGGAATTACGGAGGTTGAGCT 424
||||||||||||||||||||||
Sbjct 741 CTCCCGGCTCGACAAGTTCAAGCAGCTGCTTGCCGGCCCCAACACGGACCTTGAGGAATTACGGAGGTTGAGCT 814
Query 425 GGTCCGGAATCCCTAAGCCAGTGCGTCCAATGACGTGGAAGCTCCTCTCAGGTTACCTTCCCGCCAATGTAGAC 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGTCCGGAATCCCTAAGCCAGTGCGTCCAATGACGTGGAAGCTCCTCTCAGGTTACCTTCCCGCCAATGTAGAC 888
Query 499 CGGAGACCAGCCACTCTCCAGAGAAAACAAAAAGAATATTTTGCATTTATTGAGCACTATTACGATTCTAGGAA 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGGAGACCAGCCACTCTCCAGAGAAAACAAAAAGAATATTTTGCATTTATTGAGCACTATTACGATTCTAGGAA 962
Query 573 CGACGAAGTTCACCAGGACACATACAGGCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGTTGATCC 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGACGAAGTTCACCAGGACACATACAGGCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGTTGATCC 1036
Query 647 TGCAGCCCAAGGTGACGGAGATTTTTGAAAGGATCTTGTTCATATGGGCGATCCGCCACCCAGCCAGTGGATAC 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGCAGCCCAAGGTGACGGAGATTTTTGAAAGGATCTTGTTCATATGGGCGATCCGCCACCCAGCCAGTGGATAC 1110
Query 721 GTTCAGGGTATAAATGATCTCGTCACTCCTTTCTTTGTGGTCTTCATTTGTGAATACATAGAGGCAGAGGAGGT 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTTCAGGGTATAAATGATCTCGTCACTCCTTTCTTTGTGGTCTTCATTTGTGAATACATAGAGGCAGAGGAGGT 1184
Query 795 GGACACGGTGGACGTCTCCGGCGTGCCCGCAGAGGTGCTGTGCAACATCGAGGCCGACACCTACTGGTGCATGA 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGACACGGTGGACGTCTCCGGCGTGCCCGCAGAGGTGCTGTGCAACATCGAGGCCGACACCTACTGGTGCATGA 1258
Query 869 GCAAGCTGCTGGATGGCATTCAGGACAACTACACCTTTGCCCAACCTGGGATTCAAATGAAAGTGAAAATGTTA 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCAAGCTGCTGGATGGCATTCAGGACAACTACACCTTTGCCCAACCTGGGATTCAAATGAAAGTGAAAATGTTA 1332
Query 943 GAAGAACTCGTGAGCCGGATTGATGAGCAAGTGCACCGGCACCTGGACCAACACGAAGTGAGATACCTGCAGTT 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAAGAACTCGTGAGCCGGATTGATGAGCAAGTGCACCGGCACCTGGACCAACACGAAGTGAGATACCTGCAGTT 1406
Query 1017 TGCCTTCCGCTGGATGAACAACCTGCTGATGAGGGAGGTGCCCCTGCGTTGTACCATCCGCCTGTGGGACACCT 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGCCTTCCGCTGGATGAACAACCTGCTGATGAGGGAGGTGCCCCTGCGTTGTACCATCCGCCTGTGGGACACCT 1480
Query 1091 ACCAGTCTGAACCGGACGGCTTTTCTCATTTCCACTTGTACGTGTGCGCTGCTTTTCTCGTGAGATGGAGGAAG 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACCAGTCTGAACCGGACGGCTTTTCTCATTTCCACTTGTACGTGTGCGCTGCTTTTCTCGTGAGATGGAGGAAG 1554
Query 1165 GAAATACTAGAAGAAAAAGATTTTCA------------------------------AGAGCT------------ 1196
|||||||||||||||||||||||||| |.||||
Sbjct 1555 GAAATACTAGAAGAAAAAGATTTTCAAAGGGAAAACCCAAGGCTCGGAGAAACCACAAAGCTGCCCAAAGAGAC 1628
Query 1197 ----------------------------------------------------------------GCTGCTCTTC 1206
||||||.|||
Sbjct 1629 GCAGCCCCTCCTGGGGGCCGGGATGGGAACTCGGGCAGGGGCATCCACAGGCTCAGCCCCCCGAGCTGCTGTTC 1702
Query 1207 CTCCAGAACCTGCC-CA-CAG---CCCAC-TG-GGATGA--TGAGGACAT--------------------CAG- 1250
| |||||| || ||| ||||| || |.||.| ||.|||||| |||
Sbjct 1703 C-------CCTGCCACATCAGCGACCCACGTGTGTATCATTTGTGGACATGTCTGTGAAGACGGAAAGCACAGG 1769
Query 1251 --------------CCTGTTGCTG-GCCGAGG--CCT----ACCGCCT---CAAGTTTGCTTTTGCCGA----- 1295
||||.||||| |..|.|| ||| .|.|||| .||||...|.|.||..||
Sbjct 1770 ATGGAGAGAGGGCTCCTGCTGCTGTGGTGTGGGACCTTCGAGCAGCCTGTGGAAGTCATCCTGTGAGGAACTGT 1843
Query 1296 ---CGCCCCCAATCA--------------------CTACA-----AG--AAA---------------------- 1317
|.|||||||.|| ||.|| || |||
Sbjct 1844 GGCCTCCCCCAAGCAGCGCATATTGGAGGCAGAGGCTTCAGCCCCAGTCAAACCCTCAGATGATGGCAGCCCCA 1917
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1918 GCCAACGTCATGACGCAGCCTCTGGAGAGACCCTGAGCCAGGGCCACCCACCCGAACTTACCCTGGATCCTGAC 1991
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1992 CCACAGAAACTGCAAGTCGATAAAGGCACTGGGCTAAATGCATCAAAAGGATCTCACCATCTTCCCAGCAGCCC 2065
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2066 ACAGGGAGCAGAGGTTTTCATTACCATCATTCTCAGAGGACACGACTGGGGCTCAGAGAGGGGAAGAAACCTCT 2139
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2140 CCAGCTTGCACAGCTGAGTCATTCCCCAAATGGATGAGACCCCAGCACAGGAGAAATGCATGACAGCCAGATAA 2213
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2214 TAAACCTGCATATCAGAACTGTCAGATCGTCTTCAGAGCAAAAGGCAACATGCTCTCCCGAGAACCCATGCTCT 2287
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2288 TAACCAGTGCATTGAGCTGCCTATTTTCTCACACCTATAGCAACATGAAATTGACAAATATTTTGATCATAGCC 2361
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2362 AACTTGGTAAGTAAAAAAAGAAAAAAATCTAATTTTAGTTTGCATTTTCTGTACTATGACCAAGGTTGAACATT 2435
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2436 TCTTCAAATGTTTAAGAAATATGTTTTTCCCTTATGTGAACTGTTTTTAATTGTTGTCTTTTTTTCCTTTTATC 2509
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2510 TATTGACTTTCTTATTGGTTTATAGAAGCTCTTTACATATTAAGCAGTCCTTCTGTGATATGGAATGCATGCAT 2583
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2584 TTTTCTATTCTTTTATGTCTTTCAACTTTATGGGTTTTTTAACATCACATAATTAAAAAACATTTATGTAGTCA 2657
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2658 AAATGTGCACATTTTTTGGTATGTATTTGTGTCTATGTGTGTGTGCATATTTAACATGCTGAGAAGTTCTGGCC 2731
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2732 GTCCTGAGATTTAAATAATTCTCTTTTGTCTTCTTCTAGTACTTTTATCAGTCCATTGAAGTCTTTCATCCATC 2805
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2806 TGGAGATTTTTTTTTTCTGTAAAATGTGAGGGAGGGATTCCGTTTTTTCCCATACACCATTAATTGTATAATCT 2879
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2880 ATCTTCTCCTTTCACTGGACATTTTTCCTTTATAATATAGTAAATGTCCTCATGTGTTTGGGATCCTCCAAATG 2953
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2954 TGTGTATGATCTGTGTATGAATGTAGGTGGATCACTTTAAAAATTCTTGTAATTTAACACATTTTACCAACTGA 3027
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3028 TAGAGCTAGTCACTCAACTAATCTTTTTGGTGAGAACTTTTGAATCAGCATATCTGGTTTCTCAAAACATCCAG 3101
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3102 TTGATGTCTTTTATGAGGATAATTAACATCTTGATGTTGTCTAGCTTTCCTTTTCTAAAACATGGCATGTATAT 3175
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3176 ACATATTTTAAGTCTTCTTTATATCTAGTTCCATTTTAATTTTTAAAAAGTAGAGCTTGAACATTTCTTAGGTT 3249
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3250 TATTAGTAGATATTTTAATCATTTTTATTATAGCTTCTAATAAATTTTGTTTTAATATATAAAACCTATTGACT 3323
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3324 TCCATATGCCAACTTCATGTCTATACTCTTAGTGAATTCTATCATTATTTGTAATAGTTTTTCGGTTAATTTTC 3397
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3398 TTGGAATTTCCAGATATATAATTATATAATCTGCAAATAATAATAATTGCATACTTTCTCAATTTTCATATATC 3471
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3472 TTATTTCTTTCTCTTCTTTATGTTGGTATTTCTAGGATAATGTTCAATAATAGTAACAATAGTAGATCTCTTTG 3545
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3546 CCTTGTCTTAACTTTAACAGGAATGTTTATAGATATTATCTTATTAATTATAATGCTGACCTTTGGGATGAGAT 3619
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3620 AAATGCATTTTATCATATTAAGTATCCTGTCATTTTTGAGCAGTTGCAAAAATAAAAATATGGCTGTTGAGATT 3693
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3694 TATCAGTGCTTTTCCAGCATAAATAAAGATGATTATATGATTTGCCTTTTGATCTAATAATATGGGGAATTACA 3767
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3768 TTAATAGATTTCCTAATGTTGAAACATCTGTGCGTTTCTGGAAAAAGGTAAGTTGTGTTTCTATTTTTCATTAA 3841
Query 1318 ---------------------- 1317
Sbjct 3842 ATTTCCTAAAGATTTTGCTTTA 3863
