Nucleotide Global Alignment

Description

Query:
TRCN0000472194
Subject:
XR_001755205.1
Aligned Length:
3962
Identities:
1275
Gaps:
2653

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAAGTCTGTGCCCTTACCCATCACAGCCTCATCCTTATCTCCTCCATTCCCTAGGGGACTTAACAGGTGTTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AATTATTACAGAGAAAGCTGACTCACTCACCAGGAATCTGATCCTGCTGTGGGCTGGCTTGGGTGGAGGTGTTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTCCCGCCCCCGCACCCATCCTCCTGTTTGAACTCAGGCTGCTGCCTGCTGGGCCTGCCTGCCCTTGGAGCCCT  222

Query    1  -------------------ATGG-----CCAGCGACGGGG-----CCA--------------GGAAGCA-----  26
                               .|||     |||| |..||||     |||              ||.||||     
Sbjct  223  GCTGAGCTCAGCCTGAGGCCTGGCTCCTCCAG-GCTGGGGGAAAACCAGGCTTGCTGTGCTCGGCAGCAGAGAT  295

Query   27  -ATTCTGGA---AGC--GCAGCA------------ACAGCAAGCTCCC-----------------GGGCAGTTT  65
             .|||||||   |||  .|||||            .|||||..|.|||                 .||||.|||
Sbjct  296  TCTTCTGGAGTGAGCATCCAGCACGTGTATGGTGCCCAGCACCCCCCCTTTGATCCACTGTTACATGGCACTTT  369

Query   66  GCTCAGGTCCACGGCCAAGATGCCGACCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGA  139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  370  GCTCAGGTCCACGGCCAAGATGCCGACCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGA  443

Query  140  GCAATACCAGCGATGCCTGGGACGCTGGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAAC  213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  444  GCAATACCAGCGATGCCTGGGACGCTGGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAAC  517

Query  214  TCCGAGGTGGTCATGGAGACGGCCAACCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCA  287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  518  TCCGAGGTGGTCATGGAGACGGCCAACCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCA  591

Query  288  GGAGGGGCCAGGGCTTCAGCAGAAGCCCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGC  361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  592  GGAGGGGCCAGGGCTTCAGCAGAAGCCCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGC  665

Query  362  TGGTGAAGTCGGTCAGTGAGAGCCACACGTCCTGTCCTGCA---------------------------------  402
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct  666  TGGTGAAGTCGGTCAGTGAGAGCCACACGTCCTGTCCTGCAGAAAGTGCCAGCGATGCCGCCCCTCTGCAGAGG  739

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  740  TCCCAGTCTCTCCCACACTCGGCCACCGTCACGCTGGGTGGCACATCTGACCCCAGCACTCTCAGCAGCTCAGC  813

Query  403  ----------------------------------------------------------------------GAGG  406
                                                                                  ||||
Sbjct  814  GCTGAGCGAAAGAGAGGCCTCCCGGCTCGACAAGTTCAAGCAGCTGCTTGCCGGCCCCAACACGGACCTTGAGG  887

Query  407  AATTACGGAGGTTGAGCTGGTCCGGAATCCCTAAGCCAGTGCGTCCAATGACGTGGAAGCTCCTCTCAGGTTAC  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  AATTACGGAGGTTGAGCTGGTCCGGAATCCCTAAGCCAGTGCGTCCAATGACGTGGAAGCTCCTCTCAGGTTAC  961

Query  481  CTTCCCGCCAATGTAGACCGGAGACCAGCCACTCTCCAGAGAAAACAAAAAGAATATTTTGCATTTATTGAGCA  554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  CTTCCCGCCAATGTAGACCGGAGACCAGCCACTCTCCAGAGAAAACAAAAAGAATATTTTGCATTTATTGAGCA  1035

Query  555  CTATTACGATTCTAGGAACGACGAAGTTCACCAGGACACATACAGGCAGATCCACATAGACATCCCTCGCATGA  628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  CTATTACGATTCTAGGAACGACGAAGTTCACCAGGACACATACAGGCAGATCCACATAGACATCCCTCGCATGA  1109

Query  629  GCCCTGAAGCGTTGATCCTGCAGCCCAAGGTGACGGAGATTTTTGAAAGGATCTTGTTCATATGGGCGATCCGC  702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  GCCCTGAAGCGTTGATCCTGCAGCCCAAGGTGACGGAGATTTTTGAAAGGATCTTGTTCATATGGGCGATCCGC  1183

Query  703  CACCCAGCCAGTGGATACGTTCAGGGTATAAATGATCTCGTCACTCCTTTCTTTGTGGTCTTCATTTGTGAATA  776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  CACCCAGCCAGTGGATACGTTCAGGGTATAAATGATCTCGTCACTCCTTTCTTTGTGGTCTTCATTTGTGAATA  1257

Query  777  CATAGAGGCAGAGGAGGTGGACACGGTGGACGTCTCCGGCGTGCCCGCAGAGGTGCTGTGCAACATCGAGGCCG  850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258  CATAGAGGCAGAGGAGGTGGACACGGTGGACGTCTCCGGCGTGCCCGCAGAGGTGCTGTGCAACATCGAGGCCG  1331

Query  851  ACACCTACTGGTGCATGAGCAAGCTGCTGGATGGCATTCAGGACAACTACACCTTTGCCCAACCTGGGATTCAA  924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332  ACACCTACTGGTGCATGAGCAAGCTGCTGGATGGCATTCAGGACAACTACACCTTTGCCCAACCTGGGATTCAA  1405

Query  925  ATGAAAGTGAAAATGTTAGAAGAACTCGTGAGCCGGATTGATGAGCAAGTGCACCGGCACCTGGACCAACACGA  998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406  ATGAAAGTGAAAATGTTAGAAGAACTCGTGAGCCGGATTGATGAGCAAGTGCACCGGCACCTGGACCAACACGA  1479

Query  999  AGTGAGATACCTGCAGTTTGCCTTCCGCTGGATGAACAACCTGCTGATGAGGGAGGTGCCCCTGCGTTGTACCA  1072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480  AGTGAGATACCTGCAGTTTGCCTTCCGCTGGATGAACAACCTGCTGATGAGGGAGGTGCCCCTGCGTTGTACCA  1553

Query 1073  TCCGCCTGTGGGACACCTACCAGTCTGAACCGGACGGCTTTTCTCATTTCCACTTGTACGTGTGCGCTGCTTTT  1146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554  TCCGCCTGTGGGACACCTACCAGTCTGAACCGGACGGCTTTTCTCATTTCCACTTGTACGTGTGCGCTGCTTTT  1627

Query 1147  CTCGTGAGATGGAGGAAGGAAATACTAGAAGAAAAAGATTTTCA------------------------------  1190
            ||||||||||||||||||||||||||||||||||||||||||||                              
Sbjct 1628  CTCGTGAGATGGAGGAAGGAAATACTAGAAGAAAAAGATTTTCAAAGGGAAAACCCAAGGCTCGGAGAAACCAC  1701

Query 1191  AGAGCT--------------------------------------------------------------------  1196
            |.||||                                                                    
Sbjct 1702  AAAGCTGCCCAAAGAGACGCAGCCCCTCCTGGGGGCCGGGATGGGAACTCGGGCAGGGGCATCCACAGGCTCAG  1775

Query 1197  --------GCTGCTCTTCCTCCAGAACCTGCC-CA-CAG---CCCAC-TG-GGATGA--TGAGGACAT------  1247
                    ||||||.||||       |||||| || |||   ||||| || |.||.|  ||.||||||      
Sbjct 1776  CCCCCCGAGCTGCTGTTCC-------CCTGCCACATCAGCGACCCACGTGTGTATCATTTGTGGACATGTCTGT  1842

Query 1248  --------------CAG---------------CCTGTTGCTG-GCCGAGG--CCT----ACCGCCT---CAAGT  1282
                          |||               ||||.||||| |..|.||  |||    .|.||||   .||||
Sbjct 1843  GAAGACGGAAAGCACAGGATGGAGAGAGGGCTCCTGCTGCTGTGGTGTGGGACCTTCGAGCAGCCTGTGGAAGT  1916

Query 1283  TTGCTTTTGCCGA--------CGCCCCCAATCA--------------------CTACA-----AG--AAA----  1317
            ...|.|.||..||        |.|||||||.||                    ||.||     ||  |||    
Sbjct 1917  CATCCTGTGAGGAACTGTGGCCTCCCCCAAGCAGCGCATATTGGAGGCAGAGGCTTCAGCCCCAGTCAAACCCT  1990

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1991  CAGATGATGGCAGCCCCAGCCAACGTCATGACGCAGCCTCTGGAGAGACCCTGAGCCAGGGCCACCCACCCGAA  2064

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2065  CTTACCCTGGATCCTGACCCACAGAAACTGCAAGTCGATAAAGGCACTGGGCTAAATGCATCAAAAGGATCTCA  2138

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2139  CCATCTTCCCAGCAGCCCACAGGGAGCAGAGGTTTTCATTACCATCATTCTCAGAGGACACGACTGGGGCTCAG  2212

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2213  AGAGGGGAAGAAACCTCTCCAGCTTGCACAGCTGAGTCATTCCCCAAATGGATGAGACCCCAGCACAGGAGAAA  2286

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2287  TGCATGACAGCCAGATAATAAACCTGCATATCAGAACTGTCAGATCGTCTTCAGAGCAAAAGGCAACATGCTCT  2360

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2361  CCCGAGAACCCATGCTCTTAACCAGTGCATTGAGCTGCCTATTTTCTCACACCTATAGCAACATGAAATTGACA  2434

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2435  AATATTTTGATCATAGCCAACTTGGTAAGTAAAAAAAGAAAAAAATCTAATTTTAGTTTGCATTTTCTGTACTA  2508

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2509  TGACCAAGGTTGAACATTTCTTCAAATGTTTAAGAAATATGTTTTTCCCTTATGTGAACTGTTTTTAATTGTTG  2582

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2583  TCTTTTTTTCCTTTTATCTATTGACTTTCTTATTGGTTTATAGAAGCTCTTTACATATTAAGCAGTCCTTCTGT  2656

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2657  GATATGGAATGCATGCATTTTTCTATTCTTTTATGTCTTTCAACTTTATGGGTTTTTTAACATCACATAATTAA  2730

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2731  AAAACATTTATGTAGTCAAAATGTGCACATTTTTTGGTATGTATTTGTGTCTATGTGTGTGTGCATATTTAACA  2804

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2805  TGCTGAGAAGTTCTGGCCGTCCTGAGATTTAAATAATTCTCTTTTGTCTTCTTCTAGTACTTTTATCAGTCCAT  2878

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2879  TGAAGTCTTTCATCCATCTGGAGATTTTTTTTTTCTGTAAAATGTGAGGGAGGGATTCCGTTTTTTCCCATACA  2952

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2953  CCATTAATTGTATAATCTATCTTCTCCTTTCACTGGACATTTTTCCTTTATAATATAGTAAATGTCCTCATGTG  3026

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3027  TTTGGGATCCTCCAAATGTGTGTATGATCTGTGTATGAATGTAGGTGGATCACTTTAAAAATTCTTGTAATTTA  3100

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3101  ACACATTTTACCAACTGATAGAGCTAGTCACTCAACTAATCTTTTTGGTGAGAACTTTTGAATCAGCATATCTG  3174

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3175  GTTTCTCAAAACATCCAGTTGATGTCTTTTATGAGGATAATTAACATCTTGATGTTGTCTAGCTTTCCTTTTCT  3248

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3249  AAAACATGGCATGTATATACATATTTTAAGTCTTCTTTATATCTAGTTCCATTTTAATTTTTAAAAAGTAGAGC  3322

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3323  TTGAACATTTCTTAGGTTTATTAGTAGATATTTTAATCATTTTTATTATAGCTTCTAATAAATTTTGTTTTAAT  3396

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3397  ATATAAAACCTATTGACTTCCATATGCCAACTTCATGTCTATACTCTTAGTGAATTCTATCATTATTTGTAATA  3470

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3471  GTTTTTCGGTTAATTTTCTTGGAATTTCCAGATATATAATTATATAATCTGCAAATAATAATAATTGCATACTT  3544

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3545  TCTCAATTTTCATATATCTTATTTCTTTCTCTTCTTTATGTTGGTATTTCTAGGATAATGTTCAATAATAGTAA  3618

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3619  CAATAGTAGATCTCTTTGCCTTGTCTTAACTTTAACAGGAATGTTTATAGATATTATCTTATTAATTATAATGC  3692

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3693  TGACCTTTGGGATGAGATAAATGCATTTTATCATATTAAGTATCCTGTCATTTTTGAGCAGTTGCAAAAATAAA  3766

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3767  AATATGGCTGTTGAGATTTATCAGTGCTTTTCCAGCATAAATAAAGATGATTATATGATTTGCCTTTTGATCTA  3840

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3841  ATAATATGGGGAATTACATTAATAGATTTCCTAATGTTGAAACATCTGTGCGTTTCTGGAAAAAGGTAAGTTGT  3914

Query 1318  ----------------------------------------  1317
                                                    
Sbjct 3915  GTTTCTATTTTTCATTAAATTTCCTAAAGATTTTGCTTTA  3954

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