Nucleotide Global Alignment
Description
- Query:
- TRCN0000472194
- Subject:
- XR_001755206.2
- Aligned Length:
- 3693
- Identities:
- 1288
- Gaps:
- 2383
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAACTTCCGGAAGGAGGCGGAAGAGCTTCTCGGCTCTAGGCTCTGGAGTCCCGGGAGCAGTGAGGGGCCACCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCACAGGAAAGGGCCGCTAGGGGAGGGCCGGGTGCACTCGGGGTGTCTGGGCCGCGGGTCTGAGGGATGAG 148
Query 1 --------ATGGCCAGCGACGGGGCCAGGAAGCAATTCTGGAAGCGCAGCAACAGCAAGCTCCCGGGCAG---- 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAGGGGCCATGGCCAGCGACGGGGCCAGGAAGCAATTCTGGAAGCGCAGCAACAGCAAGCTCCCGGGCAGCATC 222
Query 63 -----------------------------------------------------TTTGCTCAGGTCCACGGCCAA 83
|||||||||||||||||||||
Sbjct 223 CAGCACGTGTATGGTGCCCAGCACCCCCCCTTTGATCCACTGTTACATGGCACTTTGCTCAGGTCCACGGCCAA 296
Query 84 GATGCCGACCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGAGCAATACCAGCGATGCCT 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATGCCGACCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGAGCAATACCAGCGATGCCT 370
Query 158 GGGACGCTGGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAACTCCGAGGTGGTCATGGAG 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGGACGCTGGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAACTCCGAGGTGGTCATGGAG 444
Query 232 ACGGCCAACCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCAGGAGGGGCCAGGGCTTCA 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACGGCCAACCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCAGGAGGGGCCAGGGCTTCA 518
Query 306 GCAGAAGCCCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGCTGGTGAAGTCGGTCAGTG 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCAGAAGCCCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGCTGGTGAAGTCGGTCAGTG 592
Query 380 AGAGCCACACGTCCTGTCCTGCAGAGGAATTACGGAGGTTGAGCTGGTCCGGAATCCCTAAGCCAGTGCGTCCA 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGAGCCACACGTCCTGTCCTGCAGAGGAATTACGGAGGTTGAGCTGGTCCGGAATCCCTAAGCCAGTGCGTCCA 666
Query 454 ATGACGTGGAAGCTCCTCTCAGGTTACCTTCCCGCCAATGTAGACCGGAGACCAGCCACTCTCCAGAGAAAACA 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATGACGTGGAAGCTCCTCTCAGGTTACCTTCCCGCCAATGTAGACCGGAGACCAGCCACTCTCCAGAGAAAACA 740
Query 528 AAAAGAATATTTTGCATTTATTGAGCACTATTACGATTCTAGGAACGACGAAGTTCACCAGGACACATACAGGC 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAAAGAATATTTTGCATTTATTGAGCACTATTACGATTCTAGGAACGACGAAGTTCACCAGGACACATACAGGC 814
Query 602 AGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGTTGATCCTGCAGCCCAAGGTGACGGAGATTTTTGAA 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGTTGATCCTGCAGCCCAAGGTGACGGAGATTTTTGAA 888
Query 676 AGGATCTTGTTCATATGGGCGATCCGCCACCCAGCCAGTGGATACGTTCAGGGTATAAATGATCTCGTCACTCC 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGGATCTTGTTCATATGGGCGATCCGCCACCCAGCCAGTGGATACGTTCAGGGTATAAATGATCTCGTCACTCC 962
Query 750 TTTCTTTGTGGTCTTCATTTGTGAATACATAGAGGCAGAGGAGGTGGACACGGTGGACGTCTCCGGCGTGCCCG 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTTCTTTGTGGTCTTCATTTGTGAATACATAGAGGCAGAGGAGGTGGACACGGTGGACGTCTCCGGCGTGCCCG 1036
Query 824 CAGAGGTGCTGTGCAACATCGAGGCCGACACCTACTGGTGCATGAGCAAGCTGCTGGATGGCATTCAGGACAAC 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGAGGTGCTGTGCAACATCGAGGCCGACACCTACTGGTGCATGAGCAAGCTGCTGGATGGCATTCAGGACAAC 1110
Query 898 TACACCTTTGCCCAACCTGGGATTCAAATGAAAGTGAAAATGTTAGAAGAACTCGTGAGCCGGATTGATGAGCA 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TACACCTTTGCCCAACCTGGGATTCAAATGAAAGTGAAAATGTTAGAAGAACTCGTGAGCCGGATTGATGAGCA 1184
Query 972 AGTGCACCGGCACCTGGACCAACACGAAGTGAGATACCTGCAGTTTGCCTTCCGCTGGATGAACAACCTGCTGA 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGTGCACCGGCACCTGGACCAACACGAAGTGAGATACCTGCAGTTTGCCTTCCGCTGGATGAACAACCTGCTGA 1258
Query 1046 TGAGGGAGGTGCCCCTGCGTTGTACCATCCGCCTGTGGGACACCTACCAGTCTGAACCGGACGGCTTTTCTCAT 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGAGGGAGGTGCCCCTGCGTTGTACCATCCGCCTGTGGGACACCTACCAGTCTGAACCGGACGGCTTTTCTCAT 1332
Query 1120 TTCCACTTGTACGTGTGCGCTGCTTTTCTCGTGAGATGGAGGAAGGAAATACTAGAAGAAAAAGATTTTCA--- 1190
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TTCCACTTGTACGTGTGCGCTGCTTTTCTCGTGAGATGGAGGAAGGAAATACTAGAAGAAAAAGATTTTCAAAG 1406
Query 1191 ---------------------------AGAGCT----------------------------------------- 1196
|.||||
Sbjct 1407 GGAAAACCCAAGGCTCGGAGAAACCACAAAGCTGCCCAAAGAGACGCAGCCCCTCCTGGGGGCCGGGATGGGAA 1480
Query 1197 -----------------------------------GCTGCTCTTCCTCCAGAACCTGCC-CA-CAG---CCCAC 1230
||||||.|||| |||||| || ||| |||||
Sbjct 1481 CTCGGGCAGGGGCATCCACAGGCTCAGCCCCCCGAGCTGCTGTTCC-------CCTGCCACATCAGCGACCCAC 1547
Query 1231 -TG-GGATGA--TGAGGACAT--------------------CAG---------------CCTGTTGCTG-GCCG 1264
|| |.||.| ||.|||||| ||| ||||.||||| |..|
Sbjct 1548 GTGTGTATCATTTGTGGACATGTCTGTGAAGACGGAAAGCACAGGATGGAGAGAGGGCTCCTGCTGCTGTGGTG 1621
Query 1265 AGG--CCT----ACCGCCT---CAAGTTTGCTTTTGCCGA--------CGCCCCCAATCA-------------- 1307
.|| ||| .|.|||| .||||...|.|.||..|| |.|||||||.||
Sbjct 1622 TGGGACCTTCGAGCAGCCTGTGGAAGTCATCCTGTGAGGAACTGTGGCCTCCCCCAAGCAGCGCATATTGGAGG 1695
Query 1308 ------CTACA-----AG--AAA--------------------------------------------------- 1317
||.|| || |||
Sbjct 1696 CAGAGGCTTCAGCCCCAGTCAAACCCTCAGATGATGGCAGCCCCAGCCAACGTCATGACGCAGCCTCTGGAGAG 1769
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1770 ACCCTGAGCCAGGGCCACCCACCCGAACTTACCCTGGATCCTGACCCACAGAAACTGCAAGTCGATAAAGGCAC 1843
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1844 TGGGCTAAATGCATCAAAAGGATCTCACCATCTTCCCAGCAGCCCACAGGGAGCAGAGGTTTTCATTACCATCA 1917
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1918 TTCTCAGAGGACACGACTGGGGCTCAGAGAGGGGAAGAAACCTCTCCAGCTTGCACAGCTGAGTCATTCCCCAA 1991
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1992 ATGGATGAGACCCCAGCACAGGAGAAATGCATGACAGCCAGATAATAAACCTGCATATCAGAACTGTCAGATCG 2065
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2066 TCTTCAGAGCAAAAGGCAACATGCTCTCCCGAGAACCCATGCTCTTAACCAGTGCATTGAGCTGCCTATTTTCT 2139
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2140 CACACCTATAGCAACATGAAATTGACAAATATTTTGATCATAGCCAACTTGGTAAGTAAAAAAAGAAAAAAATC 2213
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2214 TAATTTTAGTTTGCATTTTCTGTACTATGACCAAGGTTGAACATTTCTTCAAATGTTTAAGAAATATGTTTTTC 2287
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2288 CCTTATGTGAACTGTTTTTAATTGTTGTCTTTTTTTCCTTTTATCTATTGACTTTCTTATTGGTTTATAGAAGC 2361
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2362 TCTTTACATATTAAGCAGTCCTTCTGTGATATGGAATGCATGCATTTTTCTATTCTTTTATGTCTTTCAACTTT 2435
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2436 ATGGGTTTTTTAACATCACATAATTAAAAAACATTTATGTAGTCAAAATGTGCACATTTTTTGGTATGTATTTG 2509
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2510 TGTCTATGTGTGTGTGCATATTTAACATGCTGAGAAGTTCTGGCCGTCCTGAGATTTAAATAATTCTCTTTTGT 2583
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2584 CTTCTTCTAGTACTTTTATCAGTCCATTGAAGTCTTTCATCCATCTGGAGATTTTTTTTTTCTGTAAAATGTGA 2657
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2658 GGGAGGGATTCCGTTTTTTCCCATACACCATTAATTGTATAATCTATCTTCTCCTTTCACTGGACATTTTTCCT 2731
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2732 TTATAATATAGTAAATGTCCTCATGTGTTTGGGATCCTCCAAATGTGTGTATGATCTGTGTATGAATGTAGGTG 2805
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2806 GATCACTTTAAAAATTCTTGTAATTTAACACATTTTACCAACTGATAGAGCTAGTCACTCAACTAATCTTTTTG 2879
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2880 GTGAGAACTTTTGAATCAGCATATCTGGTTTCTCAAAACATCCAGTTGATGTCTTTTATGAGGATAATTAACAT 2953
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2954 CTTGATGTTGTCTAGCTTTCCTTTTCTAAAACATGGCATGTATATACATATTTTAAGTCTTCTTTATATCTAGT 3027
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3028 TCCATTTTAATTTTTAAAAAGTAGAGCTTGAACATTTCTTAGGTTTATTAGTAGATATTTTAATCATTTTTATT 3101
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3102 ATAGCTTCTAATAAATTTTGTTTTAATATATAAAACCTATTGACTTCCATATGCCAACTTCATGTCTATACTCT 3175
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3176 TAGTGAATTCTATCATTATTTGTAATAGTTTTTCGGTTAATTTTCTTGGAATTTCCAGATATATAATTATATAA 3249
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3250 TCTGCAAATAATAATAATTGCATACTTTCTCAATTTTCATATATCTTATTTCTTTCTCTTCTTTATGTTGGTAT 3323
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3324 TTCTAGGATAATGTTCAATAATAGTAACAATAGTAGATCTCTTTGCCTTGTCTTAACTTTAACAGGAATGTTTA 3397
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3398 TAGATATTATCTTATTAATTATAATGCTGACCTTTGGGATGAGATAAATGCATTTTATCATATTAAGTATCCTG 3471
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3472 TCATTTTTGAGCAGTTGCAAAAATAAAAATATGGCTGTTGAGATTTATCAGTGCTTTTCCAGCATAAATAAAGA 3545
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3546 TGATTATATGATTTGCCTTTTGATCTAATAATATGGGGAATTACATTAATAGATTTCCTAATGTTGAAACATCT 3619
Query 1318 ------------------------------------------------------------------- 1317
Sbjct 3620 GTGCGTTTCTGGAAAAAGGTAAGTTGTGTTTCTATTTTTCATTAAATTTCCTAAAGATTTTGCTTTA 3686
