Nucleotide Global Alignment
Description
- Query:
- TRCN0000472194
- Subject:
- XR_002958682.1
- Aligned Length:
- 3668
- Identities:
- 1283
- Gaps:
- 2354
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAACTTCCGGAAGGAGGCGGAAGAGCTTCTCGGCTCTAGGCTCTGGAGTCCCGGGAGCAGTGAGGGGCCACCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCACAGGAAAGGGCCGCTAGGGGAGGGCCGGGTGCACTCGGGGTGTCTGGGCCGCGGGTCTGAGGGATGAG 148
Query 1 --------ATGGCCAGCGACGGGGCCAGGAAGCAATTCTGGAAGCGCAGCAACAGCAAGCTCCCGGGCAG---- 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAGGGGCCATGGCCAGCGACGGGGCCAGGAAGCAATTCTGGAAGCGCAGCAACAGCAAGCTCCCGGGCAGCATC 222
Query 63 -----------------------------------------------------TTTGCTCAGGTCCACGGCCAA 83
|||||||||||||||||||||
Sbjct 223 CAGCACGTGTATGGTGCCCAGCACCCCCCCTTTGATCCACTGTTACATGGCACTTTGCTCAGGTCCACGGCCAA 296
Query 84 GATGCCGACCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGAGCAATACCAGCGATGCCT 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATGCCGACCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGAGCAATACCAGCGATGCCT 370
Query 158 GGGACGCTGGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAACTCCGAGGTGGTCATGGAG 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGGACGCTGGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAACTCCGAGGTGGTCATGGAG 444
Query 232 ACGGCCAACCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCAGGAGGGGCCAGGGCTTCA 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACGGCCAACCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCAGGAGGGGCCAGGGCTTCA 518
Query 306 GCAGAAGCCCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGCTGGTGAAGTCGGTCAGTG 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCAGAAGCCCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGCTGGTGAAGTCGGTCAGTG 592
Query 380 AGAGCCACACGTCCTGTCCTGCA--------------------------------------------------- 402
|||||||||||||||||||||||
Sbjct 593 AGAGCCACACGTCCTGTCCTGCAGAAAGTGCCAGCGATGCCGCCCCTCTGCAGAGGTCCCAGTCTCTCCCACAC 666
Query 403 -------------------------------------------------------------------------- 402
Sbjct 667 TCGGCCACCGTCACGCTGGGTGGCACATCTGACCCCAGCACTCTCAGCAGCTCAGCGCTGAGCGAAAGAGAGGC 740
Query 403 ----------------------------------------------------GAGGAATTACGGAGGTTGAGCT 424
||||||||||||||||||||||
Sbjct 741 CTCCCGGCTCGACAAGTTCAAGCAGCTGCTTGCCGGCCCCAACACGGACCTTGAGGAATTACGGAGGTTGAGCT 814
Query 425 GGTCCGGAATCCCTAAGCCAGTGCGTCCAATGACGTGGAAGCTCCTCTCAGGTTACCTTCCCGCCAATGTAGAC 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGTCCGGAATCCCTAAGCCAGTGCGTCCAATGACGTGGAAGCTCCTCTCAGGTTACCTTCCCGCCAATGTAGAC 888
Query 499 CGGAGACCAGCCACTCTCCAGAGAAAACAAAAAGAATATTTTGCATTTATTGAGCACTATTACGATTCTAGGAA 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGGAGACCAGCCACTCTCCAGAGAAAACAAAAAGAATATTTTGCATTTATTGAGCACTATTACGATTCTAGGAA 962
Query 573 CGACGAAGTTCACCAGGACACATACAGGCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGTTGATCC 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGACGAAGTTCACCAGGACACATACAGGCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGTTGATCC 1036
Query 647 TGCAGCCCAAGGTGACGGAGATTTTTGAAAGGATCTTGTTCATATGGGCGATCCGCCACCCAGCCAGTGGATAC 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGCAGCCCAAGGTGACGGAGATTTTTGAAAGGATCTTGTTCATATGGGCGATCCGCCACCCAGCCAGTGGATAC 1110
Query 721 GTTCAGGGTATAAATGATCTCGTCACTCCTTTCTTTGTGGTCTTCATTTGTGAATACATAGAGGCAGAGGAGGT 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTTCAGGGTATAAATGATCTCGTCACTCCTTTCTTTGTGGTCTTCATTTGTGAATACATAGAGGCAGAGGAGGT 1184
Query 795 GGACACGGTGGACGTCTCCGGCGTGCCCGCAGAGGTGCTGTGCAACATCGAGGCCGACACCTACTGGTGCATGA 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGACACGGTGGACGTCTCCGGCGTGCCCGCAGAGGTGCTGTGCAACATCGAGGCCGACACCTACTGGTGCATGA 1258
Query 869 GCAAGCTGCTGGATGGCATTCAGGACAACTACACCTTTGCCCAACCTGGGATTCAAATGAAAGTGAAAATGTTA 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCAAGCTGCTGGATGGCATTCAGGACAACTACACCTTTGCCCAACCTGGGATTCAAATGAAAGTGAAAATGTTA 1332
Query 943 GAAGAACTCGTGAGCCGGATTGATGAGCAAGTGCACCGGCACCTGGACCAACACGAAGTGAGATACCTGCAGTT 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAAGAACTCGTGAGCCGGATTGATGAGCAAGTGCACCGGCACCTGGACCAACACGAAGTGAGATACCTGCAGTT 1406
Query 1017 TGCCTTCCGCTGGATGAACAACCTGCTGATGAGGGAGGTGCCCCTGCGTTGTACCATCCGCCTGTGGGACACCT 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGCCTTCCGCTGGATGAACAACCTGCTGATGAGGGAGGTGCCCCTGCGTTGTACCATCCGCCTGTGGGACACCT 1480
Query 1091 ACCAGTCTGAACCGGACGGCTTTTCTCATTTCCACTTGTACGTGTGCGCTGCTTTTCTCGTGAGATGGAGGAAG 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACCAGTCTGAACCGGACGGCTTTTCTCATTTCCACTTGTACGTGTGCGCTGCTTTTCTCGTGAGATGGAGGAAG 1554
Query 1165 GAAATACTAGAAGAAAAAGATTTTCAAGAGCTGCTGCT---------------CTTCCTCCAG----------- 1212
|||||||||||||||||||||||||||| |||.||||| ||||...|||
Sbjct 1555 GAAATACTAGAAGAAAAAGATTTTCAAG-GCTCCTGCTGCTGTGGTGTGGGACCTTCGAGCAGCCTGTGGAAGT 1627
Query 1213 -AACCTG------------------CCCA---------------------------CAGCC---------CACT 1231
|.|||| |||| ||||| |.||
Sbjct 1628 CATCCTGTGAGGAACTGTGGCCTCCCCCAAGCAGCGCATATTGGAGGCAGAGGCTTCAGCCCCAGTCAAACCCT 1701
Query 1232 GGGATGATG-------------AGGACAT----CAGCCTGTTG-------CTG-GCCGAGGCCTACCGCCTCAA 1280
..||||||| |.|.||| ||||||.|.| ||| |||..||||..||.||..||
Sbjct 1702 CAGATGATGGCAGCCCCAGCCAACGTCATGACGCAGCCTCTGGAGAGACCCTGAGCCAGGGCCACCCACCCGAA 1775
Query 1281 GTTTGCTT--TTGCCGACGCCCCCAATCACTACAAG-----AAA------------------------------ 1317
.||..|.| .|.|.|| |||.||...|||.|||| |||
Sbjct 1776 CTTACCCTGGATCCTGA--CCCACAGAAACTGCAAGTCGATAAAGGCACTGGGCTAAATGCATCAAAAGGATCT 1847
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1848 CACCATCTTCCCAGCAGCCCACAGGGAGCAGAGGTTTTCATTACCATCATTCTCAGAGGACACGACTGGGGCTC 1921
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1922 AGAGAGGGGAAGAAACCTCTCCAGCTTGCACAGCTGAGTCATTCCCCAAATGGATGAGACCCCAGCACAGGAGA 1995
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1996 AATGCATGACAGCCAGATAATAAACCTGCATATCAGAACTGTCAGATCGTCTTCAGAGCAAAAGGCAACATGCT 2069
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2070 CTCCCGAGAACCCATGCTCTTAACCAGTGCATTGAGCTGCCTATTTTCTCACACCTATAGCAACATGAAATTGA 2143
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2144 CAAATATTTTGATCATAGCCAACTTGGTAAGTAAAAAAAGAAAAAAATCTAATTTTAGTTTGCATTTTCTGTAC 2217
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2218 TATGACCAAGGTTGAACATTTCTTCAAATGTTTAAGAAATATGTTTTTCCCTTATGTGAACTGTTTTTAATTGT 2291
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2292 TGTCTTTTTTTCCTTTTATCTATTGACTTTCTTATTGGTTTATAGAAGCTCTTTACATATTAAGCAGTCCTTCT 2365
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2366 GTGATATGGAATGCATGCATTTTTCTATTCTTTTATGTCTTTCAACTTTATGGGTTTTTTAACATCACATAATT 2439
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2440 AAAAAACATTTATGTAGTCAAAATGTGCACATTTTTTGGTATGTATTTGTGTCTATGTGTGTGTGCATATTTAA 2513
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2514 CATGCTGAGAAGTTCTGGCCGTCCTGAGATTTAAATAATTCTCTTTTGTCTTCTTCTAGTACTTTTATCAGTCC 2587
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2588 ATTGAAGTCTTTCATCCATCTGGAGATTTTTTTTTTCTGTAAAATGTGAGGGAGGGATTCCGTTTTTTCCCATA 2661
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2662 CACCATTAATTGTATAATCTATCTTCTCCTTTCACTGGACATTTTTCCTTTATAATATAGTAAATGTCCTCATG 2735
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2736 TGTTTGGGATCCTCCAAATGTGTGTATGATCTGTGTATGAATGTAGGTGGATCACTTTAAAAATTCTTGTAATT 2809
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2810 TAACACATTTTACCAACTGATAGAGCTAGTCACTCAACTAATCTTTTTGGTGAGAACTTTTGAATCAGCATATC 2883
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2884 TGGTTTCTCAAAACATCCAGTTGATGTCTTTTATGAGGATAATTAACATCTTGATGTTGTCTAGCTTTCCTTTT 2957
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2958 CTAAAACATGGCATGTATATACATATTTTAAGTCTTCTTTATATCTAGTTCCATTTTAATTTTTAAAAAGTAGA 3031
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3032 GCTTGAACATTTCTTAGGTTTATTAGTAGATATTTTAATCATTTTTATTATAGCTTCTAATAAATTTTGTTTTA 3105
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3106 ATATATAAAACCTATTGACTTCCATATGCCAACTTCATGTCTATACTCTTAGTGAATTCTATCATTATTTGTAA 3179
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3180 TAGTTTTTCGGTTAATTTTCTTGGAATTTCCAGATATATAATTATATAATCTGCAAATAATAATAATTGCATAC 3253
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3254 TTTCTCAATTTTCATATATCTTATTTCTTTCTCTTCTTTATGTTGGTATTTCTAGGATAATGTTCAATAATAGT 3327
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3328 AACAATAGTAGATCTCTTTGCCTTGTCTTAACTTTAACAGGAATGTTTATAGATATTATCTTATTAATTATAAT 3401
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3402 GCTGACCTTTGGGATGAGATAAATGCATTTTATCATATTAAGTATCCTGTCATTTTTGAGCAGTTGCAAAAATA 3475
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3476 AAAATATGGCTGTTGAGATTTATCAGTGCTTTTCCAGCATAAATAAAGATGATTATATGATTTGCCTTTTGATC 3549
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3550 TAATAATATGGGGAATTACATTAATAGATTTCCTAATGTTGAAACATCTGTGCGTTTCTGGAAAAAGGTAAGTT 3623
Query 1318 ------------------------------------------ 1317
Sbjct 3624 GTGTTTCTATTTTTCATTAAATTTCCTAAAGATTTTGCTTTA 3665
