Nucleotide Global Alignment

Description

Query:
TRCN0000472278
Subject:
XR_002957120.1
Aligned Length:
2532
Identities:
915
Gaps:
1602

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGCCGGGCCGCGCCACCAAGCCCGCTGTCCCCAGCTTTCCTCGGCAGATCCCCTGGCTACCCCCACCCTGCGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGGCCGTTCACCAGATGCCAGAAAATCAGGGTGGGGCACGCAGGCCAGGGGCTCCAGCGGCTGGGCACCGTGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTTCCCGAACCTGGTGCTGGAAGTGCGCCCGCCTCCGCCTCTCCCAGGCACCCACCGGCACTGCCCAGCCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCTGGAGGGTCTAGGACTGAACGTCTGTCCCCGGCCTTCATCCTGGCTGCAGAGGACTGGCCGGGTGATGCCGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCTGTCCTGGCCCTGGGCCCGCCTGGAAGACCCGCCTGTGTCGCGGGCCCCCTCCCTGGCTCTGGCCTCTAAAG  370

Query    1  -------------------------ATGAAGTCC-------CCG-------CCCC------------TCC----  19
                                     .||.||.||       |||       ||||            |||    
Sbjct  371  CGCCCCCGGCACAGCTTCCCGGCCCTTGCAGCCCGGTGGGGCCGGAACCTTCCCCTTGTCACTGTTGTCCTTTC  444

Query   20  -----TCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTATCTCATCAGGTTTTG  88
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCCTTTCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTATCTCATCAGGTTTTG  518

Query   89  CTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTAGGTTTAATTGGTCT  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTAGGTTTAATTGGTCT  592

Query  163  CATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGTCGGGGTAAGCCCCA  236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGTCGGGGTAAGCCCCA  666

Query  237  CTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGTGCCCAGGGAGTACT  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGTGCCCAGGGAGTACT  740

Query  311  GGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTCCGTGGAACCTGCAT  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTCCGTGGAACCTGCAT  814

Query  385  GAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTGATGGCCGCAGAGAT  458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTGATGGCCGCAGAGAT  888

Query  459  CGGGCTGTGGGTGATTCTGCGTCCAGGCCCCTACATCTGCAGTGAGATGGACCTCGGGGGCTTGCCCAGCTGGC  532
            |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CGGGCTGTGGGTGATTCTGCGTCCAGGCCGCTACATCTGCAGTGAGATGGACCTCGGGGGCTTGCCCAGCTGGC  962

Query  533  TCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTGAGAAGTATTTTGAC  606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTGAGAAGTATTTTGAC  1036

Query  607  CACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTGCAAGTGGAGAATGA  680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTGCAAGTGGAGAATGA  1110

Query  681  GTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGGATTGTGG  754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGGATTGTGG  1184

Query  755  AGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGCCATCAAT  828
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGCCATCAAT  1258

Query  829  TTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGGGAGCCAGTATA----------GATG  892
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||     |||          |||.
Sbjct 1259  TTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAG-----ATAAGCCCCTTCTGATT  1327

Query  893  CAGGACTGCT-------CT-------CAGATGCCTC-----ACAAGCAGCA-----------------------  924
            ..|||.|.||       ||       ||||||         |.|||||.||                       
Sbjct 1328  ATGGAATACTGGGTCGGCTGGTTCGACAGATG----GGGAGATAAGCACCATGTTAAAGATGCAAAGGAGGTTG  1397

Query  925  ---------------ACTTCTTC-----------CTCCTTA---------------------------------  939
                           |.|||.||           ||||||.                                 
Sbjct 1398  AACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAACCAACTTT  1471

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1472  GGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGACTATGATGCAGTGCT  1545

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1546  CACGGAGGCTGGAGATTACACAGAAAAATATCTGAAGCTTCAAAAACTCTTTCAATCTGTCTCAGCAACTCCCC  1619

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1620  TGCCCCGAGTACCCAAACTTCCTCCCAAGGCTGTGTATCCCCCCGTGAGACCGTCGCTGTACCTCCCGCTGTGG  1693

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1694  GACGCCCTATCCTACTTAAATGAGCCAGTCAGGTCGCGTCAGCCCGTCAACATGGAGAACCTTCCCATAAACAA  1767

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1768  TGGGAGCGGCCAGTCCTACGGGCTTGTCCTGTATGAGAAGTCCATCTGCTCCGGAGGCCGCCTCCGTGCCCACG  1841

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1842  CTCATGACGTGGCACAGGTGTTTTTGGATGAGACAATGATAGGGATTCTGAATGAGAATAATAAGGACCTGCAC  1915

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1916  ATTCCTGAACTCAGGGACTGCCGATACCTGAGGATCCTGGTGGAGAATCAAGGACGAGTCAATTTTTCATGGCA  1989

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1990  AATACAGAATGAGCAGAAAGGAATAACTGGATCTGTCAGCATCAATAACTCTTCCCTGGAGGGCTTTACCATCT  2063

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 2064  ATTCCCTGGAGATGAAAATGAGCTTCTTTGAGAGGCTCCGCTCTGCCACCTGGAAGCCTGTCCCAGACAGCCAC  2137

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 2138  CAGGGCCCGGCCTTCTACTGTGGGACCTTGAAGGCTGGCCCTTCTCCCAAGGACACCTTCCTGAGCCTGCTGAA  2211

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 2212  CTGGAATTATGGATTTGTGTTCATCAATGGACGTAACCTTGGGCGATATTGGAATATTGGGCCTCAGAAAACAC  2285

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 2286  TGTACCTTCCTGGAGTTTGGCTTCATCCAGAAGACAATGAGGTATGTCACTCCAGTCTCTGCCTTGAGATCTCA  2359

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 2360  TAAACTTTCAGATCAAAATGTGTAACATCTGCAACATCTAAACTTAACAACAACCATGCAACATATCCATTTTA  2433

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 2434  CAGATGAGAAACCAAGGTTCAAAGAGTGAGTACAGTCGTCCTGCAGCATCCGTGGGGGACCAGTTCCACCATCT  2507

Query  940  ----------------  939
                            
Sbjct 2508  ACTATGGATACCGAAA  2523

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