Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- NR_109996.1
- Aligned Length:
- 3487
- Identities:
- 216
- Gaps:
- 3240
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTAGATGACCCGCCCCCTCGGGCTGTCGGGGGGTCGAGACAGTGGAGTGTTCCTGATGCCAGCTCACGGAGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATCCAGGGAATTAGGTAATGAACGGTCTACCCATGAAGGGGACCGATTAGTGCCTCTCGCCTGGTCCTGAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTTAAATTATTCTTTCAGCTGATGCCAAGAGCCTCTTTTTGGCCAGCACTTACTAAGCACCAGAGACACAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGAAGCAGAAGCATACGAGCACATCAGTGTGATTCTGCTGTGATGAAGGGCAAGAGAGGGCTCACTTTCCGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGACATTCAAGCTAGCCCCGAGGCCTGAGCAGGACCCGCCCAGGGGAAGATCTGGAGGAAAGCCATCTGAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TACAACAAGAGCAAAGGCCTGGTGGAGTCAAGACCACCTTGGCTGCCAGGTGGAATGGTGGAATAACTCAGGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTGTCAGGTCTCTGAGATGTCAAACGGGCTTGGCACACACCCAGGAGCTCAATGCTGCTGGGAGCTGAGCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGGAGCAAGGAGCCCTCATCCCCACTGATGAAGAGGCCAGCCCAGGTTCTAGGCTAAGCAGGCCTGTGATTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAACAGCAGTGTCTCCCTGGACAAGTTTCTTGACCCTGAGAAGAATGTTAGACCATCAACTTTGTGAGGGGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCAGTCTCCAACTTTTTTCCTGCTCAGTCCTTATTGCATACTCTTGGAGAAGGTCTACTGACTTGTTCTCAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCCCACGGCTCAGCCAACCACCCATCCAGCAGAGCATTCAAAAGGCATCTGGAAGGAATGAGGGCGACCGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCCAGGCCCCTATTTTTTTTTGAGAGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAATGGCATGACCTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCTCACTGCAAGCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGTACTACAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGTGCACCACCACACCCAGCAAATTTTTTCTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGCCAGGATGGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCAATCTCTTGACCTCGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTGGCTTTTTTTTTTTCTTTTAGATGGAGTCTTCCTTTTGTCGCCCAAGGTGGAGTGCAATGGCACGATCTCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCATCAGCCTCCTGTGTAGCTGGGATTATAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACCTGCCACCATGCCCAGTTAATTTTTGTATTTTCAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGATGGTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCGAACTCCTGACCTAGGGATCTGCCCGCCTTAGCCTCCCAAAGTTCTGGGATTACAGGCGTGAGGCACTGCAC 1406
Query 1 ----------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGC 40
|||||||||.||||||||||||||||||||||||||||||
Sbjct 1407 CTGGCCATTTTGTTTGTTTGGGTTTGTTTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGC 1480
Query 41 CTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGG 114
.||||||||||.||.|||||.|||..||||||.||||||.||.|||||.|||||||||||||||||||||||||
Sbjct 1481 ATGATCTCGGCCCATTGCAAGCTCCACCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTGG 1554
Query 115 GACTATAGACATGCACCACCACGCCCGGCTAA--TTTTGTA-TTTTTGGTCGAGACGGGGTTTTGCCATGTTAG 185
|||||.||.|.|||.||||||.||||.||||| ||||||| |||||.||.||||||||||||..|||||||||
Sbjct 1555 GACTACAGGCGTGCGCCACCATGCCCAGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCATGTTAG 1628
Query 186 TCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA--------- 249
.||||.||||||.||..||||||||||| ||||||.|| .|||.||||||||||||||.||.||
Sbjct 1629 CCAGGATGGTCTGGATTTCCTGACCTCA--TGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCG 1700
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1701 TGAGCCACCACGCCTGGCCTGTTTGTTTTTTTGAGACACAGTCTTACTCTGTTGCCCAGGCTGGAGTGCAGTGA 1774
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1775 CGCGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCGTGTCTCAGCCTCCCAAGTAGCTG 1848
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1849 GGATTATAGGTGCGCACCACCACGCCCGGCTTATTTTTTGTATTTTTAGTGCAGATGGGGTTTCACCATATTGG 1922
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1923 CCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCTGCCTCAGCTTCCCAAAATGCTGGGATTACCAGCA 1996
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1997 TGAGTCACCACGCCCGGCCAAGAAAGACCCATATTTTGTTTTGTTTTCTTTTTTGAGATGGAGTCTTGCTCTGT 2070
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2071 CGCTCAGGCTGGAGTGCAGTGGCGCAATCTCTGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCCATTCTCCT 2144
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2145 GCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCACACCACCACGCCTGGCTAATTTTTGTATTTTTAGTACA 2218
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2219 GACAGGGCCAGACTGGTCACGAACTCCTGACCTCAGGCGATCCACCCGCCTCAGCCTTCCAAAGTGCTGGAATT 2292
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2293 ATAGGTGTGAGCCATCGCACCTGGCCACCAGACCCCCATTAACTTCAGTAGGGATGGCACCAGGTTTGAGAGGC 2366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2367 CAAAAGAGATCCAGAGCCAGCAAACAAGACTTAGGTTTGATTGAGGGGAATTTGCATACAGAGCAGTCCAGTGG 2440
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2441 AGGTGGGCTAGATAGGAGAACTGCCCCACCTGCAGAAAGTATGCAGTATATATAGCATTTTCACTTAACACCCT 2514
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2515 CCCCCTAACAACTTTGATTTAACCCAAAACAAAGGGGCTAAATCCCCTGTACATCCACAGGACAGAATGGGGGC 2588
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2589 TCAGATATTCCTCATGGGTAAGTAATGAATCTCTGGCTTGTCCTCACTTGGAACTCCTAACACATTCAGGTGCA 2662
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2663 TCTGCCATACAGGGTCATTCTCAGAGTATGCTTAAGTTATTGCTGTCAGGTGCAGCTACCATACACAGGTGTGT 2736
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2737 CTGCCATATAGCCACAGAAAGCAGGAGTCCTACAGCTGCTCCTCATGGGTCTCCATAGACTAGTCTTAGAGCAA 2810
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2811 GGATGGGCAGCCAGCCTCCAGGTTTAACCTGGCACTCTCCCCCAGCACTTGGTCCCCAGAGCAGGGGTGCATCT 2884
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2885 CTCCCACTTCTGGTCAACCCTTCAGTAACAAGTAGAGCCCCCAGGGTCTTCATGAATATCTAGTTGAACTGGCT 2958
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2959 AAAGAAGAGGGCCCTGTAACAGGACAGAACACCAGGAGCCTGAACCCCGCATCTTCTACCCTTATCCTGCATTT 3032
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3033 ATCCTGCCTGCATTCAAGCCTGTCCAGCTGCACCACTGGAGGTTACCATGGCAACTAAACCCAGAGGCAGCCGG 3106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3107 TAACTGAGATACAGCTGCCAAGAGCAACTGATGGTGGAAAAGGCCAACAGCAGAGACTCTTAGAAGGAAGAGAA 3180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3181 GTACACAGGAGGAGGCCCCAGAACCCTGAGGGTGCTACACTCAAATCTAATCCTACTCACAACTCAGCAGGCAG 3254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3255 TCAACGTCTTGCACAAACTGCCATATCACCAACCAGAGGCACAGATATGGACACAATGGGGCCAATTTGCAGAG 3328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3329 ATGTTTGCAACTATGGATGCAGAGTAGCACAGGTGGGACACATGTTGTTTAGCCCAAAAGCAACGGGTCTTGGT 3402
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3403 GAAAACGAAAATGGGTAGGGTACCATTGCTGTTTCCAATGAAACAATGAATTTTGTGTGCTCTTGAAAAAAAAA 3476
Query 250 --------- 249
Sbjct 3477 AAAAAAAAA 3485
