Nucleotide Global Alignment

Description

Query:
TRCN0000472287
Subject:
NR_121578.1
Aligned Length:
3735
Identities:
216
Gaps:
3489

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATAGAGCTATGTTACATTGAATGGCAAAAGTGACTTTGTAGAGGTGTCGTTTATCCGGATGCTGCATGATTAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACCACCATACTCTTATCAAGCATACAGGTGTTAATGTCTATTTTAAAGAGGAGAGAACTCAAGAAGTTCTGTAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAACTGCTTTCTTCATCATATCTCAAAGGATTTGCTGAGGATTTCAGAGGTGCCACGAGTTGAGAGAAGACTTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGACATTTCACTTAATGCTGAAAATTCACTCTACTGCCACTACTCAGGACTTCTGATGGGCATGAAAATCCAAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTGCTTTATGATATTAACCTCTGAATTTCATAAACCGCTTAAAACTTTAGAATGTCCAGAAAACACTGGTAGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATACGGACACATGAGACAAGGCCAGAAAGGAAGTCAATAAAATGTGATTACTAAGCAAATTACCACCAGAGAAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CAGAAGGAAATCCCTCTTCAATATTTTGAGAGACAGTAAAGAACATTCCCTGGAGTTAGGACAAATGAAGAGCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAAGTTTCATCTTGCTCTGTCATCCAGGCTGGAGTGCAGGGGCACCATCTCGGCTCACTGAAACCTCCACTTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAACTGGGGTTACAGAGTGAATAGACAACCTACAGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGGGAGAAAATACTTGCAAGCTATGTATCCAACAAAGGACTAATATCGAGAATTTACAAGGAACTCAAACAAAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTCAACAAGAGTAAAACAACCCCAATAAAAAGGAAAGTGAACACATTTGGAAATATTGGCTCAGCATTGCAGCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATACCCTTTAGACAGGAAACACACTTTCCAGTTCTCCTTGACAGAGAGGCTGAAGCTGCTTATGTGTCTGGAAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGGTGGGTTCTTGGTCTCACTGACTTCAAGAATGAAGCCACGGACCCTCGCGTGAAGCAATACAGGCATTCATG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCTGGACAAAAGGAATAAGTGGACTACATGCAGAGGCAGAGTGAGGCTGGAAAATACATCCTGCCATGGGTATA  1036

Query    1  -----------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTG  33
                                                     |.||||||||||||||||| |||||||||||||
Sbjct 1037  CAACCCAAGCTATCTATGTAGATTTTTTTTGTTTTTTTGAGACGGAGTCTCGCTCTGTTG-CCAGGCTGGAGTG  1109

Query   34  CAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAG  107
            |||||||..|.||||||||||||||||||||..|||||..|||||||||||||||.||||||||||||||..||
Sbjct 1110  CAGTGGCGGGGTCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAG  1183

Query  108  TAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCAT  180
            |||||||||.||.||.||||..||||||.|||.|||||| |||||||||||..||.||||.|||||||..||||
Sbjct 1184  TAGCTGGGATTACAGGCATGTGCCACCATGCCTGGCTAATTTTTGTATTTTCAGTAGAGAGGGGGTTTCACCAT  1257

Query  181  GTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA----  249
            |.|||.|||||||||||||.||||||||||||  |||||||| ||.||||||||||||||||||.||.||    
Sbjct 1258  GGTAGCCAGGCTGGTCTTGCACTCCTGACCTC--GTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTGC  1329

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1330  AGGCATGAGCCACCACACCTGGCCTATGTAGATTTTTTTGTTGCCTTTTGATTTTTTTTTTTTTTGCTTATTCT  1403

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1404  GATTCTAATTGTACAAATCAATAATAAAAATGTTAAAAACAGACTTAAAATATTCATGACTATGCAAATGATTC  1477

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1478  AAATATAGTTATTTAAAGTTTCTTTCTTTTTTAAATTGGGACATGGTCTTGCTCTTCAACCCAAGGCTGGGTGG  1551

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1552  CATAGGTGAAAGAGCAAGACCAAGGCATGACCAAGGCTCACTGCAGCCTTGACCTCCTGATCTCGTTATCCTCC  1625

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1626  CACTTCAGCCTCCCAAGTAGCTGGGTATAGGCATGCACCACAGTCCCCAGCTAATATTTTAATTTTTTGTGTGT  1699

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1700  GGAGACATGGTCTTGCCCTGTTGCCCAGGCTGGTCTTGAATTCCTGAGTTCAAGTGATCCTTGCTTCTCAGGCT  1773

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1774  CCCTAAGTGCTAAGATTACGGGTGTGGGTCCCCAGCCAAAACAATCTTCCTAGGGAAGCCCTCACATTTTCAAG  1847

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1848  GGTTTTACCTTTAGTACCTCCATAAATTCGTATCAAGCAACAAAATGTACTGTCAAGGAACAAAAAATATAAAG  1921

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1922  GGACCTTAAATGCATATTTCTAAGACCAAGAAGTCAGTCTGAAATGGCTACATACTATATAATCCTATATGACT  1995

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1996  CCTATATGAAAGATATGACATTCTGGAAAAGGCAGAACAATAGAGTAAAAAGATCAATGGTTGCTTGGGTTTGG  2069

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2070  TATGCATGTGTGTTAGAGGGCAGGGTGGCTGGTGAGAGGAATACATAGGTGAAGCACAAGTGATTTTTATGGCA  2143

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2144  CTGCAACTGTTCTGCATGATACCATAATAATAATAAATGACATTTTTCATTTGTCAAAACACATAGAATGTACA  2217

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2218  AGAGAAAGAGTAGAACTTAATGTAAATTATGAACTGTAGTTACTATTGATATGTAAATATTGGTGTTCTAATTG  2291

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2292  TATCAAATGCACCACACCAGTGAAAGACATTAGTAATAGGAGAAATGTGTACGAGTTTGGGAGGTTATATGGCA  2365

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2366  ATTTCTGTACTATCTGCTCTTGTTTTTATTGTAATTTTAAAATTGTGCTAAAATAAAGTTTATTAGTTTAATTT  2439

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2440  TCAAGAGATTAAGAATGTATGTTTAAATGTAATAATATATATGCAGAGCTTTATGTCTATCCATATACTTCAAG  2513

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2514  CCAAATCTACTTTTGGTGAGTTCGTCTGTTTATAAAACACACAGAAATAGGAAGAAAAATAATTGACAAATATT  2587

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2588  TACTATGAAATAACTTTATAAGCAGTAAATTGAAAGCACATACATATATTTTAAAAAGGCATTTATATACTTAA  2661

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2662  GCAAATTATTTTCCAAATATAGAATATTAGCCAGCCAACAAATAATGTTTAAGAAAGTTTGTAATTTTCTGAGA  2735

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2736  CAATACGGATGATAAAATATTAAGTAAAGAACAACTTTGTTGTAATGTGATATATAACATGACATAAATAAAAA  2809

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2810  GAAAAAATCTAGATTAATGTGTAGTCAATAAGAATTGCCATGAAACATTGTCAAACTGATATTTGAAATTTATT  2883

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2884  GTTTTAAAGCCCCTTATAACTAATATTCTGTTTTTCCATATAATCCTATTAATGTATAAATAAAATCTTCTATT  2957

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2958  TACCAATTGGATATTAAATCAAAATAATGTAAATTAACATCTACAAATCATAACTTTTCTTAATGTTTATTCTT  3031

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3032  TGAGAATACATAGTAGTTGCACATATTTAAGGCATACATGTGATATTTTGATATGTGTGTATCACGTGTAATGA  3105

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3106  TCAAATCAGAGTAATTGGGATATCCATCACCTGAAACATTTATCATAGCTTTAAAGGGCCAAAGCCAGGATTTA  3179

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3180  ACTCTCTTAGATTCCAAAGTCCACGTTCTTAGAAATATTAATTAAAATAATGACAATGTTTGCCTCTGGGTTAT  3253

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3254  GCTATTATGAGAAATTTAATATTTTTAAAGCAGAAATTGAAATTTTTGTAATAGGAAGATATTTAATAAATATG  3327

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3328  GAAATGTATAACTGATTTTTTCTCCTATGTCATTATTGTTGAAAGAAAATCTTCATATCTTACGTAAATATATT  3401

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3402  CTAGATCATCTGACAGATTTTATAATTTCTCATTATAAATTAAGATTTTTTTTTATTATCTTCGGTGGTGAAAA  3475

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3476  ATACGCTCGCCAAACTGACAGGAAAATGTAATGTAATGCTAATTGCTTAATTGATTATTACTAGGAGTCCACAA  3549

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3550  TTTTCAGTGCTTTTCTTTCTATTTCTGTGTATTTTATAAAGAGACAAATTCACCAAAAATCAGTTTGGCTTGAA  3623

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3624  GTATATGGACACACATAAAGCTCTGCACATGTATTATTACATTTAAACATACATTCTTAATCTGTTGGAAATTA  3697

Query  250  -----------------------------------  249
                                               
Sbjct 3698  AACTAATAAACTTTATTTGAGCACAATTTTAAATA  3732

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