Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- NR_148048.2
- Aligned Length:
- 6849
- Identities:
- 218
- Gaps:
- 6602
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGAGAGATGCGAAATCAGCGGTAGCAGGTGGCGCAGAAGGGAGAGGGGAGCGACCCTGGGGACCGACTCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACCCTCGCCGAAGAGAAAATAACTCTAAAATCTGGACATGATATACAAAGTGACTGCCTAAAGGAGCTGAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGGACATAAGTGGATCGCCTCTGCTGTTGCATGTTGGCTTGGAGAACAGAAGATGAGGAGCCAAATAAGCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCTTCAGCCCCAGGCTTCTAGCACGGGGCTGCATGTAGGCTATGCATTCTGGGGAGTGAGGAGATCATGAATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGAAAATAAATGAAGGAATCCAGAAAAGCAAGAGTCAAAGAAGGCATCTGCAGGCCAAATCTCTGATCAACCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGACCCACATACACACAAAATACACTCAAAGCAGCTCAGCTAAAGACAAAGATCTGCACTCAGAGTAGAGCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTCCCCAGAAACAGAGCTCGCAGTTCAGGCCCAGCAAGAAAATTACCTGCAAAACAAAGGAAAAACAACACTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCAGAGAAAAAGAACAGAATCTGGAATCTTCACAACCTAGCATTCATCATATCCAAGATTGAAACCCAAATTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGACATATTTAAAAACCAGGAAAATGGAACGTAGTCTTAAGAGAAAAGTCAATCAAATCTGACCTGGAGATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATAATATATTGAAACTTAAAAGGCAAGGGTTTTAATTTTTGTTTTCTTGTTTTTTTTCTGTTTGTTTGTTTGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTTGTTTTTGTTTTTTGAGATGGAATCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTTGGCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCAGCCTCTGCCTCCTGGGTTCAAGGAATTCTCCTGTCTCAGCCTTCCGAGTAGCTGGGACTACAGGCGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCACCACACCCAGCTAATTTTTGTGTTTTTAGTAGAGACAGGGTTTCACCATATTGGTCAGGCTGGTCTTAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGCATTACAGGCATGAGCCACCGCACCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCTTGTTTTCTGGGGTTTTGTTGAGATGAGGTCTCACTCTGTCACACAGGCTGGAGTGTAGTGGTGCGATCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCTCACTGCAGCTTTAAACTCCTGGGCTCAAGCAATCCTTTTGCCTCAGCTAGCATGCTCAGTTAATTTTTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATATTTTTTGTAGACATGGGGTCTTGCTATGTTGCCTAGGCTGGTCTTAAACTCCTGGCTTCAAGCAATCCTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACCTTGGCCTCCCAAAGTGGTAGGATTATAGGTGTAAGCTCTCCTGCCCAGCCGGCAAGGGCTTGAAAGTGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGTTATTTTATAGTTTTAGGAGGTTTTGTAGCTCTCTATGATGAAGTTTAAAAATTAAGAAAAAAAGCTTGTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTGATTAATCGAAATCTCAGCACAGAAATGGGACATTTCATCAGAGAAATAGATACAATGAAGAAGAGCCAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGGAAAGCCCCCTTTTTTGGTTGCTCTTTTTCTGCTTTCAAGGTTTATATTAGCTTGACTTAGATGTGCCTTGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTGGACTTCGTTATGTCCCTTCTGCTTAGTGTTTGTCTAATATCTTGAATCTGCAAATCTCTGACTTTCATTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGCTGGGAAGTGTTTGGTTATTATTTCTTTAAATATTTTTTCTACTTGAGTTTCTTCTCTCCCTCTGAGATTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAATTACATGTATGTTTGTTTGATATCATCTAACAAGTCTCTGAGATTTTGTTCATTATGTTCTAAGTCTTTTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCACTCTGTTACTCATTTTGAGTAATTTTGATTGATCTGTCTTAAAATTTACTCTTTCCTTTAACATGTCCACT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGCTGTTAACTCCATCTGGTGAATTTTCTACTTAAGAAATTATACTTTTCAGCTGTAGAATTTACATGAAGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTACATTATCAACTGTAAATGGGCCATGAAAAGTTAAGGTTGAATTTTGTAATTTATAAATCAACTATTAAACA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTGCAGAATAGCTGTAAAGCATCAGGAAAATTAAAATAGAATATATCTTAAAATATTAAGTAATTTTTAAAGGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGGAAATAAGAAATGAAGAAACAAATGTCAGAGGAGACAAATAGAAAACAAAATAAAACAAAAATGATAGACTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATACCCAACCATTTCAAAAATTACATTGAACATTTATGAGCTAAACACTCCAATTAAAAGACAGAGATTAATAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTGTTTTTAAATGGATACAAAAACAATTATAACATCTCACCAAAGAAGATACACAGATGCCAAAAAATTTGAAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGCTGTTTAATAGTATATGTTATTAGGTAATTACAAATTAAAACAACAATGAGATACCACTACACATCTACTAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AATAGCCAAAATTCAAAATGCTAACAACACCAAATGCTGGTAAGGATGTGGAACAACAGAAACTGTCATTCATT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTTGATGGGAATGCAAAATGGTTTGGCCACTTTGAAAGACAGTTTTGACAGTTTCTTGCAAAACGAAACATACT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTACCATATGATTCAACAATCTTACTCCTGGGTATTTACCCAAATGAGCTGAAAACTTATGTCCACACAAAAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCTGCACATGGATGTTTATAGCAACTTTATTCATAATTGCCAAAAGCTGGAAGCAATCAAGATGTCCTTCAGTA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGCAAATGGATAAACCGTGATATATCCAGACAATGGAATATTATTCAGTGTTAAAAAGAAATGAGCTGTCAAGC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CATGAAGACATGGAGGAATGTTAAATGCATATTACTAACTGAAAAAAGCCAATTTGAAAGGGCTGTGTACTGGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGGGTCAAACTATACGACATTCTGGAAAAGGCAAAACCATGGAGACAAAAAGATCAGTAGTTGCCAAGGGTTGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCAGAGGCAAGGATGAATAGATGAAACATAGAAGATTTTTAAAGGAGTGTAACTATTCTATATGATACTGTCAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGTGGCTATATGTACATAAATACATTAGACATTTGTCAAAACTCATAGAATGTATAATACCAAGAGCAAACTCT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AATGTAAACTACGGACTTTGGATAATAATGATACATCAGTGTAGGTTCATTGATTGTAGCAAATGCACCACTCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGTATGGGATGTTGATAGTGGGGAGGCCATATGTGTAGGGGTAGGGGGTGTGTGGGAACTGTCTGTACTTTCAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTCAATTTAGCTGTGAATCTAAAACTGCTCTAAAAAAATAAAATCCATTTTTTAAAAACCTAAATATAAACTAT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GTGCAAAGACATACTTTCAATATAAAGACAGAAGGAAACCAAATATAGATGGATAGAAAAAGATATATCATGTA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AATAGTAAGCACAAGAAAGCTGGAGTGGCTACATTAGTATCAAATAAAAATAGATTTCTAAAAAAAAGTATCAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAAAGATAAAGAAGGGCACTTTAGAAGAAGAAAAGGAATAATTGATCAAGATGACATAAAATTTACAAATTTAT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTGTGCCTAATAATAGTCTCAAATTACATAAGGCAAAAACTGATAGAATGAAAGGAAGAAATAGGCAATTATAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTGGAAATTTTAATGTCTCTCAGAAGTTGATAGAGTAACCAACAAAAAATCAGCAGACAGAAAACCTGAACAAC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ATTATCAGTCACTTTGACCTAATTAATATTTTTAGAACATTTCACTCAGCAATAGCAAAATGCACATTCTTTTC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AAGTGCACATGGAATGCTTACCAAGATAGACCACATTCTGGACCATAAAAAAGTTTTAATAAATATTAAAAAGG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TTGAAATCAAATAGTTTGTTCTCTGACCACAATGAAATTAAATTGGAAACCAAAAACAATAAGATAACTAGGAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AACCCCAAGCATTTGGAAACTAAGCAACACACTTCTAAATATTTATTGGGCTAAAGACTAAATCACAAGAGAGA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTGAAAATATTTTGCCCTGATGATAATATAAATACACATTTCAAAATTTGTGCAATGTAGCTAACATAGCACTT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TGAGGGAAATTTACAGTTTTGAAAGCCTATACGAAGTGGGGAAAGTTCTTAAATCAATGATCTTAATTTTCACT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GTTAAAAAATAGAAAAAAAAGAGTAAATTGAACTCAAAGCAAGCAGAGGAAGAAAATAATAAAGATAATGACAG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 ACATCAATGAATTAGAGAACGAAAAAAAGAGATAAAAAAATCATTAAAAGCAAAAAGCAGTCCTTTGAAAAAAC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TAATAAAATTGATAAATCTCAAGACTGACTGGCAAAGAAAAAAAAATGAACAATATCAAGAATGAGAGAAGGGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 CATTATTACTTTGGATATTAAAAGAATAACAATTCTCTATTGTTATGAACAACTTTATGACATTAAATGTGTCA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CAGATGAAATGAACACATTCTGGGAAATACATAAATTATAAATCTAATCAAAGATGAAATAGAAAGCTTGAACA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GCCCTGTATCAATTAAAGATATTGAATTTGTAATTAAAAACTTACTGAGAGAATTCTGGGTTTAGATGCTTCAT 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TGATGAATTCTGACAAACATTTATGAAAAAATAATACCAATCCTACAAAAACTGTTTAAGAAAATAAAGGAGGA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GGCATGATTTTATGATGCAGTATTATTCTAATTCTACAGCCAGATGAAGACATCTTAAGAAAAAAACTACAGTC 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 CAATATCCCTCATGAATATAAATGCAAAAATCCTCAACAAAATATTAGCAAGCCAAATCCAGCAGCATAAAAAA 4736
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 4737 GGTTATACACTATGATCAAGGGGCAATGCAAAGTTTTTTTTTGTTTGTTTTGTTTTTTGGGTTTTTTTTGAGAT 4810
Query 3 GGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGT 76
||||||||..|||||.|||||||||||||||||||||..|||||||.||||||||.||||||||||||||||||
Sbjct 4811 GGAGTCTCAGTCTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGTAACCTCTGCCTCCCAGGT 4884
Query 77 TCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTT 149
||||||||||||.||||||||||||||.||||||||||||.||.||.||.||||.||||||||.|||||| |||
Sbjct 4885 TCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCACAACCACGCCTGGCTAATTTT 4958
Query 150 TGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA- 222
|||||||||.||.|||||.||||||..|||||||.||||.||||||||.||||.|||||||||| |||||||
Sbjct 4959 TGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAAGCTGGTCTCGAACGCCTGACCTCA--TGATCCAC 5030
Query 223 CCACCTCGGCCTCCCAAAGTGTTGAGA----------------------------------------------- 249
|||||||.|.||||||.||||.||.||
Sbjct 5031 CCACCTCAGTCTCCCATAGTGCTGGGATTACAGGTGTAAGCCACCGCGCCTGGCCAATGCAAAGTTGTTTTAAC 5104
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5105 AGCTGACAGTTAATCAATGTAATTCAACAAATTAATAGAATAAAGACAAAAACACAGACACAGTGGTGCAATGT 5178
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5179 AGCTAACATAGTACTTAGAGGGAAATTTATCATTTTGAAAGCCTATAAGAAGGGGGTAAAAGGTCTTTTAGTCC 5252
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5253 TAGCCACTCAGGAGACTGAGGCAGGAGGTTTGTTGGAGACCAGGAGTTCAAGGCTATAGTGCACTATCATTGCA 5326
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5327 CCTGTGAATAGCCACTGCATTCCAGCCTGGGCAACATAGCAAGATCCTGTCTCTTAAAGAAAAAAAGGAAGAAG 5400
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5401 GTGAAAACAATATGATCAGTTCAATAGGTGCAGCAATAGCATTTGTCAAAATTCAACTCCTTTTTATCATTAAA 5474
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5475 AAATCTTTCAGCAAATTAAGAATAAATTAAAACTTCCTCAACCTGATTAAGGGCATCTACAAAATCTGTCAGCT 5548
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5549 AACATCCTACTACAATGTGAAAAATCAATGCTTTCTACCTAAGACGAGGTAGAGGGCAAGGATGTTGGCTCTCA 5622
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5623 TCATTTTTATTTAACTTAAATTGTATAGGAGTGCCTAGTCAGTGCAACAAAGCAAGGGAAAAATAAGGCATACA 5696
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5697 TGCTAGAAAGAAATAAGTAAAATTGTCCTTATCTACAAGTGACATTGTATAGAAAACCCTAAGAAACCCACAAT 5770
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5771 AAAAGCTATTAGAGGTACAAGGTTGCAGGATAAAATATACAAAAATCAATTCAAGGTTGCAGGATAAAATATAC 5844
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5845 AAAAATCAATTCTGTCTCACATACTAGCAACTAACATTTAGAAAGTTAAGTTATAAGACACTTTGTTTACAATA 5918
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5919 GCATAAAATACTTAGCAAAAGACATGTATGACCTGTAGGCTGAAAACAATAAAACATGACAGGAAGATCTGCAT 5992
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5993 AAATGAACAGCTATACCGTGTTCATGGATTCAAAGTCTCAATATTGTTAAGCTGGCAATCCTTTTTGAATTATT 6066
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6067 CAATAAATTCAATGCAATTCCCACGAAAATCGTAACTTTTTTTTTGAAAAAAATTTGCAAGAGTATTTTAAATT 6140
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6141 TTATATGGGAAGTCAAAGGACCTAGTATAGCCACATCGTTTTGAAAGAGGAGAACAATATTGGAACACTTCAGC 6214
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6215 TACCTGATTTCAAGAACAATATGTGGCTCTGAAGGAATGAACCAATTTTATTCTTTGATCTATAAATTGGCATT 6288
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6289 TAAATAATTTCCAAATGAGGAGAGATGGGTAGCTCTGAGATAAGCATGTGACTTCCCAAGGTGGCCAATTTGAA 6362
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6363 GGGTAATTCTCCTTTGGGATGATTGCTAAGGGAAAAAAAAAATCCATGTTGAACATAAGGTTTGTAATCAAGAC 6436
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6437 AACTGGATTTAAATATTGGATGCACCATTCAGCTCTCTAAAACTGAGTATCTTCATCTTAAAATGGGATGTGCA 6510
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6511 GTGTAAGGATTAAGGCAGTAAAGTATAGAGGCTAAGCCGTGTGCTATAGCACTGGAGCTATCTTACCCAGGTTT 6584
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6585 GAATCTAGCTTGGCCATTTTCTAGCTATGTGGCCTTGGGTATGTTTAACCTTACTTTGCTTCATCTTGCTCATT 6658
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6659 TGTACAAGCACTGCTCGTTTTATTGCATTTCACTTTATTGCACTTCACATATATTGCATTTCTTACAAATTGAA 6732
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6733 AGTTTTTGGCAACCTTGTGTGGGATAAGTCTATTGGTGCCATTTTTCTAACAGCATGTACTCACTTCATGTCTC 6806
Query 250 ----------------------------------------- 249
Sbjct 6807 TGTGTCAGCATTTTTTAGCAATAAAGTATTTTTTAAATCAA 6847
