Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- NR_152721.1
- Aligned Length:
- 3614
- Identities:
- 217
- Gaps:
- 3368
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTCACGTCCTTTTGAAGACGCCCCCGAGGGCGCTGCCCAGCAGGAGGCAGAGCTGCTGCGAGAAGAAGACCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGATCTGGGGCAGCGAGCTGTGCGTCTGACAGCGCAGGTCCAGCAGCGTGGGCCCCAGGAAGGCGATGCACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCGAAGCTGAAGAAGACGCTCCAGTAGGGTCTGGCTCTGTAACCCAGGCTTGAATGCAGTGGCATGATGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAATCTTGTTACCTGTTACTGGTCTCTTCAGGTTTTCTTTTTGGCTCAATCTTGAGATGGAGGCTCGTTTTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCACAATCATCATACACTGTAGCCTAGAACTCCTGGCCTCAA 370
Query 1 ------------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGT 32
||||||||||.||||||||||||||||.||||
Sbjct 371 GCGATTTTCCTGTCTCAGCCTACAAAGTTGCTGGAACTCTAGATGGAGTCTCTCTCTGTTGCCCAGGCTAGAGT 444
Query 33 GCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGA 106
|||||||...|||||.||||||||||||||||||||||||.|||||||||.|||||.||||||||||||||.||
Sbjct 445 GCAGTGGAACGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGA 518
Query 107 GTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCA 179
.|||||||||.||.|.||.|||||||.||||.||.||||| ||||||||||||.||..|||.|||||||..|||
Sbjct 519 ATAGCTGGGATTACATACGTGCACCATCACGTCCAGCTAATTTTTGTATTTTTAGTACAGATGGGGTTTCACCA 592
Query 180 TGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCA--CCTCGGCCTCCCAAAGTGTTGAGA-- 249
||||.|.|||||||||| ||||||||.|||||||||||||||| || |||.||||||||||||||.|| ||
Sbjct 593 TGTTGGCCAGGCTGGTC-TGAACTCCAGACCTCAAGTGATCCA-CATGCCTTGGCCTCCCAAAGTGCTG-GAAT 663
Query 250 -------------------------------------------------------------------------- 249
Sbjct 664 TACAGGTGTGAACCACCATGCCCAACCTAGCCAGCCTGATTTTTTAATATTTGTTGGGATTTATTTTGTGGCCT 737
Query 250 -------------------------------------------------------------------------- 249
Sbjct 738 AACATATGCTCTATCTTGGAAAATGTTCCATGCATATACATTAACTTTAATCTTCACAATGGTCCTGTGAGGTA 811
Query 250 -------------------------------------------------------------------------- 249
Sbjct 812 GATATTATTATCCCTATTTTATGGATAAGAAAACTGAGGCTCAGGAAGGCAGAGTAACTTGCCTAAAGTCACAC 885
Query 250 -------------------------------------------------------------------------- 249
Sbjct 886 AGCATAAGTAGCAAAGCTGAGTTTTGAGCCTGCGTTGCCTGACTCCAAAGTCTGGATCCTTCCCATGAGAATGT 959
Query 250 -------------------------------------------------------------------------- 249
Sbjct 960 CTGCCTCTCACATTCAACTCCAATACACACATCTAAGACTAGTGCATAAGCTGATAGCTGTTAACATTTTCCCC 1033
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1034 CACAGAAAATGCAGCTGAACCAAGCCTGCCTATCTTGTCTATGAGCAGCTGATTCTTTGAATCTAAAGAATTGA 1107
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1108 TACAGGACTTGATACATGTGGAATAACAGAAAGAACCTGGACCGTGGAGTGAGACAGGCTTAGACTTGAGTTCT 1181
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1182 GGCTACACACTTGGCTGTGCCAACTCAAGGCGGCTACCTTGACATTATAAGGCTGATTTTCTTCAACTGTAAAA 1255
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1256 TGTCGATGTAGGATTACATGATAACACATGCAAAGCCTCTGGTAGAACACTCAGGGCAGCACTGCTCATGCTTC 1329
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1330 TTAGTTGCCTTCCCCTGATCTGGAGTGTCAATTAATCTTGGTTTGAGTTCCTCTTGCCCACCAGTGCACTTTGG 1403
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1404 TCCCCCATTCAGTCATGTAGCAAGGGGCTATTCCTCCAGCTGTTCTTGAGTAAGCATGGCACCTCACATTCATA 1477
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1478 TAGAATGGTTACTAATAGTCATCCAAGTTATTGAGAAAAATATTGACCACAATGTACCACTCTCCCACTCCACT 1551
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1552 TTTTCCTAATTAATCTTTCCTTTGGGACTCAGCTAAGTTGTTCATTCTGCTGGGAGTGCTCCACCCACCCAGAG 1625
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1626 CTGCCCCGAGTGCCTGCCTTGTGTTCTCTGCATCCCCTCACCACCTTCCTTTGTGACAAGCAGCTGAGGTGTCT 1699
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1700 GTAACCCGAATCAATACTGGATCAGCTCCTTGAAGATAGAGATTGGGTCACACAATTATCCTTATATCTTAGAG 1773
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1774 CACAGCACCTGCCTGGTACATAGCTGGCATTCAGAAAATATTAGCTACGCAAAAATGTGTTTAAGTATTATAAC 1847
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1848 CTTGAGTTGATGAAACTCTGAGGCAAGAAATAGTATTTATAGAGGATTTCATGAAAAATGTACAATTTATCGAT 1921
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1922 CTCATCAGTTCTCAGATTTGGCTATATATTAAAATCCCCTGGAAACATAGAAAAAATCAGAATCTCTGGTTGGT 1995
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1996 GGAGTCCTGTGTTGGTATTTTGCAAAAGTTCCCAGGACTTCCTAATGTGCAGCTAGGGTTGGAAACCACTGCTC 2069
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2070 CAGAAAATCCACATTTTACCACTGAAGAACTGCCTGCATATCCTGTACCATTTAGGCCCTGCACTAAAGTGCCT 2143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2144 TTATTGAATTATACTTGGGCTTTGTGTCCAATTTGACTGAACCTGGGATATAACTGTGCGACTCTTGTCACCGG 2217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2218 AGATATGGGGAGATGTTGTTGTCAATGGATCCTCTTTATGAAGACACACCAGAGAGATGCCTATTGGGCATCAG 2291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2292 CACCAAAAAAAGGCCATGATCCTCCTGAGCAACCAGTTCATGTTTGTCTTACGGATTCCAGGAATCATTTAATT 2365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2366 AACACTATTTTCCAGGTTTGTAGTAGCTGCTGCAAAGCTCAAGATCAAAGCCATGGTGCATCTTTATCACCTAC 2439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2440 AAAGAATTTTGTGGTGTGTGTGTTACATATTGACTTGGTTCTGCATTATTTTTTGTCTTTTTCTCTTCACCCTC 2513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2514 TGATATGGTTTAGGTCTGTGTCCCTACCCAAATCTCATGTCAAATTATAATTCTCAATGTTGGAGGAGGGGCCT 2587
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2588 GGTGGGAGGTGATTGGATCATGGGGGCAGACATCCCCCTTGCTGTTCTCTCAATAATGAGTTTTTATGAGATCT 2661
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2662 GGTCGTTTGAAAGTGTGTAGCACCTCCTCCTTTGCTCTCTTTTTCCTGCTGGCCATGTGAAGATGTGCCTGCTT 2735
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2736 CCCCTTCGCCTTCCGCCATGATTGTAAGTTTTCTGAGGCCTCTCCAGAAGCAGAAGCCTGTATAGCCCACAGAA 2809
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2810 CTATGAGTCAATTAAACCTCTTTTCTTTATAAATTACCCAGTCTCAAGTATGTCTTTATATCAGTGTGAGAATG 2883
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2884 TATGAATACACCCTCCTTTCCTTAACTTTTTCTATAATAAAGCTTTTTAATTGAGATAATTCACATATCATAAT 2957
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2958 ATTCGCCCTTTTAAAGTGTACAATCCAGTGGTTTTTAGTGTATTTACAAGATTGTGTGACCATCACTACTAATT 3031
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3032 CCAGACCATTTCCATCACCCCAAAAATAAACTCCACACCCATTAGCAGTCACTTCTCACTCTCTCTTCCCCTCG 3105
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3106 ACTTACTTTCTGTCTTTATGGATTTGCCTGTTCTAGATATTTCATATCTAGATATTTCATATAAATGGAATCAT 3179
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3180 ACAATATGTGGCTTTCTGTGTCTGGTTTCCTGTACTTAGCATAATGTTTTCAAGGTTCATCCATGGTATCAGTA 3253
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3254 GTTTATTCCTTTTTTATGGCTGAATAGTATTCTATTGTATGGACATACCACATTTTGTTTATACATTCATCAGC 3327
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3328 TGTTGGACATTTGGGTTTCTACTTTTTGGCTATTATGAATTATGCTGCTGAGAATATTCATGCACAAGTTTTTA 3401
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3402 TGTGAATATGTTTTAGTTCTCTTGGGTACATATTAGAAGGGTGGTTTGCTGTGTCAGATAGTAACTCTGTGTTT 3475
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3476 AACTTTTTGAGACCCTTTCCTCATTTAAAGAAATGTTTTTGTCTTATAGTATAGTATGTATCTCTGTAAGCCAC 3549
Query 250 -------------------------------------------------------------- 249
Sbjct 3550 TACAGATTCCTCTTTTTGGAATGAGGTGGCATATAAATAAATAAATAAAAAGTCACAAAGCA 3611
