Nucleotide Global Alignment

Description

Query:
TRCN0000472287
Subject:
XR_001737004.1
Aligned Length:
4041
Identities:
216
Gaps:
3794

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCACAGCCTAGAGCCCGCCTCCGTGAAAGACTGCCGGGCGCATGCGGTCGGGGTTGTTCACTGGCTGTCCGGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCCGCGCGCGTCGCCGGCCCAGCTCTGTCGCTGACGGGAGGATCTGAAGCCGGCCGCAGGTCAAAGAGTAAAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGAAGTACATTCTGGTTACTGGTGGTGTTATATCAGGAATTGGAAAAGGAATCATTGCCAGCAGTGTGGGCACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATACTCAAGTCATGTGGTTTACATGTAACTTCAATCAAAATTGACCCCTACATTAACATTGATGCAGGAACATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCTCCTTATGAGCATGGTGAGGTTTTTGTGCTGGATGATGGTGGGGAAGTAGACCTTGACCTGGGTAACTATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCGGTTCCTTGACATCCGCCTCACCAAGGACAATAATCTGACCACTGGAAAGATATACCAGTATGTCATTAAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGGAACGGAAAGGAGATTACTTGGGGAAAACTGTCCAAGTTGTCCCTCATATCACAGATGCAATCCAGGAGTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGTGATGAGACAGGCGTTAATACCTGTAGATGAAGATGGCCTGGAACCTCAAGTGTGTGTTATTGAGCTTGGTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAACCGTGGGGGACATAGAAAGCATGCCCTTTATTGAGGCCTTCCGTCAGTTCCAATTCAAGGTCAAAAGAGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AACTTTTGTAACATCCACGTCAGTCTAGTTCCCCAGCCAAGTTCAACAGGGGAACAGAAGACTAAACCTACCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAATAGTGTTCGGGAACTTAGAGGACTTGGGCTTTCCCCAGATCTGGTTGTATGCAGGTGCTCAAATCCACTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACACATCAGTGAAGGAGAAAATATCAATGTTCTGCCATGTTGAGCCTGAACAAGTGATCTGTGTCCACGATGTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCATCCATCTACCGAGTCCCCTTGTTGTTAGAGGAGCAAGGGGTTGTAGATTATTTTCTTCGAAGACTTGACCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCCTATTGAGAGGCAGCCAAGAAAAATGCTGATGAAATGGAAAGAGATGGCTGACAGATATGATCGCTTGCTGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGACCTGCTCTATTGCCCTTGTGGGCAAATACACGAAGTTCTCAGACTCCTATGCCTCTGTCATTAAGGCTCTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGCATTCTGCACTGGCCATCAACCACAAATTGGAAATCAAGTAGAAACCACTCAGCAATGAAAAGGAAGAAAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CAGGCTGAACACTGACTGGCTCAAGCCCATAATCCCAACACTTAGGGAGGCTCTGCTGTGGGAGGATCGCCTAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GACCAGTAGTTCGAGAGCAGCCTGGTCAACATAGCGAGACCCCCGTCTCTGCAAAAAAAAGTTAAAAAAGAAAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGAACAAACAACTGATAAACACAGCAACATGGATGAACTTCAAAAACACTAAGCAAAAGAAGCCAGACACAAAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGTTATATACTATTTGGCTCCATTTATATGATGTTCTATAAGAGGCAAAACGAATCTGTGATGATAGAAATTGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ATCTGAGGTTGTTTGGGGTAGGAGGTAGAGGGGCACATTCTGGGAAGATGGTAACTTATGTTTTGTTTTGTTTT  1554

Query    1  --------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCT  42
                                            |||||||||||||||||..|||||||||||||||||||||.|
Sbjct 1555  GTTTTGTTTTGTTTTGTTTTGTTTTGTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCAT  1628

Query   43  GATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGA  116
            ||||.|.|.||||||||||||||||||.||||||||||||..||||.|||||||||||||..|.||||||||||
Sbjct 1629  GATCCCAGTTCACTGCAACCTCTGCCTTCCAGGTTCAAGCAGTTCTCCTGCCTCAGCCTCTTGGGTAGCTGGGA  1702

Query  117  CTATAGACATGCA--CCACCACGCCCGGCTA-----------ATTTTGTATTTTTGGTCGAGACGGGGTTTTGC  177
            |||.||  .||||  |||||||.|||.||||           .||||||||||||.||.||||.|||||||..|
Sbjct 1703  CTACAG--GTGCATGCCACCACACCCAGCTATTTTTTTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCAC  1774

Query  178  CATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA-  249
            ||||||.|.||||||.||||.|||||||||||||||||||||||| ||.|||||||||.||||||||.||.|| 
Sbjct 1775  CATGTTTGCCAGGCTAGTCTCGAACTCCTGACCTCAAGTGATCCACCCGCCTCGGCCTTCCAAAGTGCTGGGAT  1848

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1849  TATAGGTGTGAGCCACCACGCCCGGCTCATTCTATATCTTGGTGTGTATGTTTGACAAAACTCTTCAAAGTATG  1922

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1923  CACTTAAAATGCTTGTATTTTATTGTATGTGAATTATGCTTCAATATGGTAGAAAGAAAAAGAAAAAACCCACA  1996

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1997  AAAGCTGGGCGGAAGATGGGCTGAGGAGGCTGTCATTGAACAGAAAGCCCTCTAGAGTCTGCTGCAGAGGCTTA  2070

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2071  GCTGAGACCCGATCCTGAACACAGTAGAGTGCAGAAAGAGAGAGATTTGGGAATTTAATGATTTTGAAGGAAAC  2144

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2145  TGTTGTATTTTAAAACCTCATATTTAAAAAATGTTTAAGTTATTAAATATATTAAGTTGATCACTTTAAAGCCA  2218

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2219  GTATTAAGATGATCACTTTAAAGCCAGAATCAAGAAAGACAACTTTGATAAAATGATAATATTATTTAAAAATT  2292

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2293  AAGAACGCACAGCCTGGGGTCACGAGCCTGCTTTTCTCCCCTGTCTGAATAACATCCAGTACATAGATTCTGCG  2366

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2367  GACTTGGAGCCCATCACCTCGCAAGAAGAGCCCGTGCGCTACCACGAAGCTTGGCAGAAGCTCTGTAGTGCTCA  2440

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2441  TGGAGTGCTGGTTCCAGGAGGATTTGGTGTTCGAGGAACAGAAGGAAAAATCCAAGCAATTGCCTGGGCTCGGA  2514

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2515  ATCAGAAAAAGCCTTTTTTGGGCGTGTGCTTAGGGATGCAGTTGGCAGTGGTTGAATTCTCAAGAAACGTGCTG  2588

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2589  GGATGGCAAGATGCCAATTCTACAGAGTTTGACCCTACGACCAGTCATCCCGTGGTCGTAGACATGCCAGAACA  2662

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2663  CAACCCAGGGCAGATGGGCGGAACCATGAGGCTGGGCAAGAGGAGAACCCTGTTCCAGACCAAGAACTCAGTCA  2736

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2737  TGAGGAAACTCTATGGAGACGCAGACTACTTGGAAGAGAGGCACCGCCACCGATTTGAGGTGAATCCAGTCTGG  2810

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2811  AAAAAGTGTTTGGAAGAACAAGGCTTGAAGTTTGTTGGCCAAGATGTTGAAGGAGAGAGAATGGAAATTGTGGA  2884

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2885  GTTAGAAGATCATCCCTTTTTTGTTGGGGTTCAGTACCACCCTGAGTTCCTGTCCAGGCCTATCAAGCCCTCCC  2958

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2959  CACCATACTTTGGCCTCCTCCTGGCCTCTGTGGGGCGGCTCTCACATTACCTCCAGAAAGGCTGCAGGCTCTCA  3032

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3033  CCCAGGGACACCTATAGTGACAGGAGTGGAAGCAGCTCCCCTGACTCTGAAATCACCGAACTGAAGTTTCCATC  3106

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3107  AATAAATCATGACTGATCTTGTAGCGGATGATTCTTCAAGAGACCCTTCAAACTTGGGTAGAGTTTACAGCTCT  3180

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3181  GACTTTACACTCGGCTTTGGAGACTTTCTTTAAATTATGTTTTTATTAAGATTATTTTATTATGCGGAAAGGTA  3254

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3255  TTTGGGAAACTTGTCACTTGCATGTCCCATCACGTGTACTGGCTCCTCTGTGGTGTCTGCCTGTTGCGTGACAC  3328

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3329  TCTCCTTGCAGTTCTTGAGTTGCGGCAGAACATCGCGATGGGAACCGATGGTGGGTGGGGCTGCAGAGTGCCCC  3402

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3403  ATCGGTCACCTTGTTTCTCAACTACCTCGCATCATTGCAGATGCTAGCGCGTTGCCTGTCGCTTTCCCTTGGAT  3476

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3477  ACCTAGACCGTTATAAAGTGTGCCACATGGACTTACCGAGCATGGAGAGAGGATTTTAGCTAGGATTTGAACAC  3550

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3551  TTGGTGCTGGGAACCTCAGGGTATTGCTTGCCACTAAGCCATGAAACCAGAGACAAAATCTCTATACTGCCCTG  3624

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3625  AGTTGGGGGGAATTCTCAGTGCCAACTGTGGCTGGTCCTCATTCAAAGGGACGGTCAGTTTGGTGTCAACATGA  3698

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3699  AACACCAAGATGTCTGTCTCTGAAGCGTGATTTTAAAATCCCCATGCCTGTGGCTGCGCTTCCTATTTCTAGGG  3772

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3773  CTGGGAAACACTCCTTGCATCAAGGGGTCACTTACAGAACAAAGAATCTTTTGGGGGAAACTTCCTCTAAAACC  3846

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3847  CTCTCATATATAGACAGCTTTGACTGGAGGGTCCATTTTTCTTCCAGGATGGTGTTACTGCAGTTGAAAGGGCA  3920

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3921  ATATGAAGTTACTTTCTTAATGTGACCTAGCAATAGGCATAGCTACGTGGCACTATATTCTGGCCAGACTCGAT  3994

Query  250  ---------------------------------------------  249
                                                         
Sbjct 3995  GTGTACTCTAACTTAAGAAATAAATCAGTAAGGCAGAACAAGAGA  4039

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