Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001737004.1
- Aligned Length:
- 4041
- Identities:
- 216
- Gaps:
- 3794
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCACAGCCTAGAGCCCGCCTCCGTGAAAGACTGCCGGGCGCATGCGGTCGGGGTTGTTCACTGGCTGTCCGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCGCGCGCGTCGCCGGCCCAGCTCTGTCGCTGACGGGAGGATCTGAAGCCGGCCGCAGGTCAAAGAGTAAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAGTACATTCTGGTTACTGGTGGTGTTATATCAGGAATTGGAAAAGGAATCATTGCCAGCAGTGTGGGCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATACTCAAGTCATGTGGTTTACATGTAACTTCAATCAAAATTGACCCCTACATTAACATTGATGCAGGAACATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCTCCTTATGAGCATGGTGAGGTTTTTGTGCTGGATGATGGTGGGGAAGTAGACCTTGACCTGGGTAACTATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCGGTTCCTTGACATCCGCCTCACCAAGGACAATAATCTGACCACTGGAAAGATATACCAGTATGTCATTAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGGAACGGAAAGGAGATTACTTGGGGAAAACTGTCCAAGTTGTCCCTCATATCACAGATGCAATCCAGGAGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTGATGAGACAGGCGTTAATACCTGTAGATGAAGATGGCCTGGAACCTCAAGTGTGTGTTATTGAGCTTGGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAACCGTGGGGGACATAGAAAGCATGCCCTTTATTGAGGCCTTCCGTCAGTTCCAATTCAAGGTCAAAAGAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACTTTTGTAACATCCACGTCAGTCTAGTTCCCCAGCCAAGTTCAACAGGGGAACAGAAGACTAAACCTACCCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAATAGTGTTCGGGAACTTAGAGGACTTGGGCTTTCCCCAGATCTGGTTGTATGCAGGTGCTCAAATCCACTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACACATCAGTGAAGGAGAAAATATCAATGTTCTGCCATGTTGAGCCTGAACAAGTGATCTGTGTCCACGATGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCATCCATCTACCGAGTCCCCTTGTTGTTAGAGGAGCAAGGGGTTGTAGATTATTTTCTTCGAAGACTTGACCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCCTATTGAGAGGCAGCCAAGAAAAATGCTGATGAAATGGAAAGAGATGGCTGACAGATATGATCGCTTGCTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACCTGCTCTATTGCCCTTGTGGGCAAATACACGAAGTTCTCAGACTCCTATGCCTCTGTCATTAAGGCTCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGCATTCTGCACTGGCCATCAACCACAAATTGGAAATCAAGTAGAAACCACTCAGCAATGAAAAGGAAGAAAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGGCTGAACACTGACTGGCTCAAGCCCATAATCCCAACACTTAGGGAGGCTCTGCTGTGGGAGGATCGCCTAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACCAGTAGTTCGAGAGCAGCCTGGTCAACATAGCGAGACCCCCGTCTCTGCAAAAAAAAGTTAAAAAAGAAAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGAACAAACAACTGATAAACACAGCAACATGGATGAACTTCAAAAACACTAAGCAAAAGAAGCCAGACACAAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGTTATATACTATTTGGCTCCATTTATATGATGTTCTATAAGAGGCAAAACGAATCTGTGATGATAGAAATTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATCTGAGGTTGTTTGGGGTAGGAGGTAGAGGGGCACATTCTGGGAAGATGGTAACTTATGTTTTGTTTTGTTTT 1554
Query 1 --------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCT 42
|||||||||||||||||..|||||||||||||||||||||.|
Sbjct 1555 GTTTTGTTTTGTTTTGTTTTGTTTTGTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCAT 1628
Query 43 GATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGA 116
||||.|.|.||||||||||||||||||.||||||||||||..||||.|||||||||||||..|.||||||||||
Sbjct 1629 GATCCCAGTTCACTGCAACCTCTGCCTTCCAGGTTCAAGCAGTTCTCCTGCCTCAGCCTCTTGGGTAGCTGGGA 1702
Query 117 CTATAGACATGCA--CCACCACGCCCGGCTA-----------ATTTTGTATTTTTGGTCGAGACGGGGTTTTGC 177
|||.|| .|||| |||||||.|||.|||| .||||||||||||.||.||||.|||||||..|
Sbjct 1703 CTACAG--GTGCATGCCACCACACCCAGCTATTTTTTTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCAC 1774
Query 178 CATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA- 249
||||||.|.||||||.||||.|||||||||||||||||||||||| ||.|||||||||.||||||||.||.||
Sbjct 1775 CATGTTTGCCAGGCTAGTCTCGAACTCCTGACCTCAAGTGATCCACCCGCCTCGGCCTTCCAAAGTGCTGGGAT 1848
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1849 TATAGGTGTGAGCCACCACGCCCGGCTCATTCTATATCTTGGTGTGTATGTTTGACAAAACTCTTCAAAGTATG 1922
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1923 CACTTAAAATGCTTGTATTTTATTGTATGTGAATTATGCTTCAATATGGTAGAAAGAAAAAGAAAAAACCCACA 1996
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1997 AAAGCTGGGCGGAAGATGGGCTGAGGAGGCTGTCATTGAACAGAAAGCCCTCTAGAGTCTGCTGCAGAGGCTTA 2070
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2071 GCTGAGACCCGATCCTGAACACAGTAGAGTGCAGAAAGAGAGAGATTTGGGAATTTAATGATTTTGAAGGAAAC 2144
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2145 TGTTGTATTTTAAAACCTCATATTTAAAAAATGTTTAAGTTATTAAATATATTAAGTTGATCACTTTAAAGCCA 2218
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2219 GTATTAAGATGATCACTTTAAAGCCAGAATCAAGAAAGACAACTTTGATAAAATGATAATATTATTTAAAAATT 2292
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2293 AAGAACGCACAGCCTGGGGTCACGAGCCTGCTTTTCTCCCCTGTCTGAATAACATCCAGTACATAGATTCTGCG 2366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2367 GACTTGGAGCCCATCACCTCGCAAGAAGAGCCCGTGCGCTACCACGAAGCTTGGCAGAAGCTCTGTAGTGCTCA 2440
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2441 TGGAGTGCTGGTTCCAGGAGGATTTGGTGTTCGAGGAACAGAAGGAAAAATCCAAGCAATTGCCTGGGCTCGGA 2514
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2515 ATCAGAAAAAGCCTTTTTTGGGCGTGTGCTTAGGGATGCAGTTGGCAGTGGTTGAATTCTCAAGAAACGTGCTG 2588
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2589 GGATGGCAAGATGCCAATTCTACAGAGTTTGACCCTACGACCAGTCATCCCGTGGTCGTAGACATGCCAGAACA 2662
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2663 CAACCCAGGGCAGATGGGCGGAACCATGAGGCTGGGCAAGAGGAGAACCCTGTTCCAGACCAAGAACTCAGTCA 2736
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2737 TGAGGAAACTCTATGGAGACGCAGACTACTTGGAAGAGAGGCACCGCCACCGATTTGAGGTGAATCCAGTCTGG 2810
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2811 AAAAAGTGTTTGGAAGAACAAGGCTTGAAGTTTGTTGGCCAAGATGTTGAAGGAGAGAGAATGGAAATTGTGGA 2884
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2885 GTTAGAAGATCATCCCTTTTTTGTTGGGGTTCAGTACCACCCTGAGTTCCTGTCCAGGCCTATCAAGCCCTCCC 2958
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2959 CACCATACTTTGGCCTCCTCCTGGCCTCTGTGGGGCGGCTCTCACATTACCTCCAGAAAGGCTGCAGGCTCTCA 3032
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3033 CCCAGGGACACCTATAGTGACAGGAGTGGAAGCAGCTCCCCTGACTCTGAAATCACCGAACTGAAGTTTCCATC 3106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3107 AATAAATCATGACTGATCTTGTAGCGGATGATTCTTCAAGAGACCCTTCAAACTTGGGTAGAGTTTACAGCTCT 3180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3181 GACTTTACACTCGGCTTTGGAGACTTTCTTTAAATTATGTTTTTATTAAGATTATTTTATTATGCGGAAAGGTA 3254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3255 TTTGGGAAACTTGTCACTTGCATGTCCCATCACGTGTACTGGCTCCTCTGTGGTGTCTGCCTGTTGCGTGACAC 3328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3329 TCTCCTTGCAGTTCTTGAGTTGCGGCAGAACATCGCGATGGGAACCGATGGTGGGTGGGGCTGCAGAGTGCCCC 3402
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3403 ATCGGTCACCTTGTTTCTCAACTACCTCGCATCATTGCAGATGCTAGCGCGTTGCCTGTCGCTTTCCCTTGGAT 3476
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3477 ACCTAGACCGTTATAAAGTGTGCCACATGGACTTACCGAGCATGGAGAGAGGATTTTAGCTAGGATTTGAACAC 3550
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3551 TTGGTGCTGGGAACCTCAGGGTATTGCTTGCCACTAAGCCATGAAACCAGAGACAAAATCTCTATACTGCCCTG 3624
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3625 AGTTGGGGGGAATTCTCAGTGCCAACTGTGGCTGGTCCTCATTCAAAGGGACGGTCAGTTTGGTGTCAACATGA 3698
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3699 AACACCAAGATGTCTGTCTCTGAAGCGTGATTTTAAAATCCCCATGCCTGTGGCTGCGCTTCCTATTTCTAGGG 3772
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3773 CTGGGAAACACTCCTTGCATCAAGGGGTCACTTACAGAACAAAGAATCTTTTGGGGGAAACTTCCTCTAAAACC 3846
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3847 CTCTCATATATAGACAGCTTTGACTGGAGGGTCCATTTTTCTTCCAGGATGGTGTTACTGCAGTTGAAAGGGCA 3920
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3921 ATATGAAGTTACTTTCTTAATGTGACCTAGCAATAGGCATAGCTACGTGGCACTATATTCTGGCCAGACTCGAT 3994
Query 250 --------------------------------------------- 249
Sbjct 3995 GTGTACTCTAACTTAAGAAATAAATCAGTAAGGCAGAACAAGAGA 4039
