Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001744731.2
- Aligned Length:
- 3350
- Identities:
- 215
- Gaps:
- 3105
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGCATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCG 962
Query 1 -----------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGAT 45
|..|||||||||||||||||||||||||||||.||||||...|||
Sbjct 963 CTCCCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGAT 1036
Query 46 CTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTA 119
||.|||||||||||||||||||||||..|||||||||||||||.|||||..|||||||.||||||||||||.|
Sbjct 1037 CTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATT- 1109
Query 120 TAGACATG----CACCACCACGCCCGGCTAATTT-------------TGTATTTTTGGTCGAGACGGGGTTTTG 176
|||.| |.|||||||.||.||||||||| |.|||||||.||.||||.|||||||||
Sbjct 1110 ---ACAGGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTG 1180
Query 177 CCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA 249
|||||||.|.|||||||||||.|||||||||||||||||||||||||| .|.|.||||||||||||||.||.||
Sbjct 1181 CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGA 1254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1255 TTACAGGCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGAC 1328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1329 ATCAAGCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCA 1402
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1403 ATTGAAAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCG 1476
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1477 GGCAGATCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATAC 1550
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1551 AAAAAATTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGT 1624
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1625 GAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAAC 1698
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1699 TGTCTCAAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGA 1772
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1773 AGACTAGATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCA 1846
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1847 CCCATTCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTT 1920
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1921 GCAGTGGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCC 1994
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1995 TCCTTAGCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAA 2068
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2069 GCCTGGAAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCT 2142
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2143 GGAGTGCAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGC 2216
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2217 CTCCCAAGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCA 2290
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2291 AAGGAACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGAC 2364
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2365 CTGTTTCCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGAATCGGCTCC 2438
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2439 CAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATGA 2512
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2513 CATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTC 2586
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2587 CTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTAC 2660
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2661 AGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCC 2734
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2735 CACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCAT 2808
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2809 GTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGG 2882
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2883 TGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAG 2956
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2957 GCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACG 3030
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3031 GTGAGTTGCCAGGTGTGGCCCGTAATCGGAGCGCACAAAACATGATGGGACACGTAACGGGACCACACAGGGCA 3104
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3105 CATTGGGCACTTGCAGGGGCGCGAGGTGGCGGCACGTAATGGGAGCGCGCTGAGCATGATGGGGCATGTGCGGG 3178
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3179 AGCGCCAGGCGGGGCATGTAACCAGAGCGTGCGGGGCATGATGGGGCACGGACATGGGGGGTTAGGTGGGGCAC 3252
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3253 GTAATTGGAGCTCGCGGGGCAGGATGGGGCATCTAACTGGAGCGACAGAGAGCACGATGGGGCACTTACAGGGG 3326
Query 250 -------------------- 249
Sbjct 3327 CCGGAGGCTGGGTACGTAAT 3346
