Nucleotide Global Alignment

Description

Query:
TRCN0000472287
Subject:
XR_001749102.1
Aligned Length:
3572
Identities:
217
Gaps:
3323

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCACCTGCCCCTCTCCCTCCCGGGGCCCGGCGGCGTGTTCGGAACCCAGCTGCGGCTGCAGCTGGAGAATGAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCCCTTAGGGATGGGGGTGGGGCGGCTAAAGGGGCACCGGCGGAGGACAGGAGGGCTGTGCGTTCCGCTGGGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGCATTTTGGTGGACATCCAAAGGTGATACAGCTGGAAAAAGGATCTTCATCCAAGACAAAGAGAAACAAAGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGATAGGAAAGTGATGAAAGGCATCAAGCAAAGTGAAGATGCAAATGAGAAAACAAGATCAGAAGACAGGAATA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCTGAAACAAGTCACAAATGCATAGTATGACCTCTCAGGTAAGGACCAGGGCTGGATCATCCCAGGATGTTCAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGCATACTCTCAGGGGGCGCTGTGTTATACTGAGATCTTGCTAGGCAAAAACATGGTTTTTGTCTTTTCTGTTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAAAGGTACCTTTTGGGAGGCCAGGCGCGGTGGCTTACTCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGGATCACCTGAGGTAGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCCTTCTCTACTAAAAATACAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AATTAGCCAGGTGTGGTGGCACATGCCTGTAATGCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTAAAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCAGGAGGTGGAGGTGGCGGTGAGCCGAGATCATGCCATTGCACTCCAGCTTGAGCAAAAAGAGCAAAATTCCG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCTCAAAAAAAAAAAAAAAAAAGAAAGAGAAAGAAAGAAAAAGAAAAGAAAAGGTACCTTTTGGGAAGAAGCAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAAAAAAATTTTTTTTTTCCGCTGGCAGTATTTAGGAAGAAGAATTCTATTTATTACTTCAGTAGAGTAACATG  888

Query    1  ---------------------------------------------------ATGGAGTCTCGCTCTGTTGCCCA  23
                                                               |..|||||||.||||||||||||
Sbjct  889  CTTTACTAAAATAAGCTTCCATTCTACATGGTTTTTTTTTTTTTTTTTTAGACAGAGTCTCACTCTGTTGCCCA  962

Query   24  GGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCA  97
            ||||||||||||||||...|||||||||||||||||||||||||||||..|||||.||.|.||||.||||||||
Sbjct  963  GGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCGAGTGTTTCTCCTGCCTCA  1036

Query   98  GCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGG  170
            ||||||.|||||||||||||||.||...|.|||||||||.||||||||| |||||||.||||.||.||||||||
Sbjct 1037  GCCTCCCGAGTAGCTGGGACTACAGGAGTACACCACCACACCCGGCTAATTTTTGTAATTTTAGTAGAGACGGG  1110

Query  171  G-TTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGT  242
            | |||..||||.||.|||||||||||||.|||||||||||||||.|||||||||| .|||.|||||||||||||
Sbjct 1111  GATTTCACCATATTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGT  1184

Query  243  GTTGAGA-------------------------------------------------------------------  249
            |.||.||                                                                   
Sbjct 1185  GCTGGGATTACAGGCATGAACCACTGCGCCTGGCCCATGATTGTTCTTAAAATAAGAAACACCACATAATATTC  1258

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1259  AGTGTTCCTTATTTTGAAGGGCTCTTTATTTGGTTATATTTTAGGCATATGAAGCTATTTCATAATCCCAAAAG  1332

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1333  GGGTATTTAATGAGATTTAGAATTGATAGTCTTCTGTTGATATATATTTATAGTTATTTATACACATATTTGTA  1406

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1407  TGTTCTTAAAATAAAATGTTCAAAGTTTTTGATTCAAATGTAACATGTCTAAAATTGAAATCATTGTTTTTTTG  1480

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1481  TTTTTTTTTTTTCACAACTCAAACCCTCTTCTTTTCCCATAAACACCATATTGGGAAATGGCACCACCATGGGC  1554

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1555  ATAGTTGCTCAAGCTAGAAGGATGGGGGTATTTTGGCTCATCCCCTTCACTCTTCACATCTAATTAATTCCCTC  1628

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1629  TTTTGAGTAACATTTACTAAGTGCCAGGCCTTCTGCTAGTCTTTCGTGAAGCTTGGAGTTAGAGTGAGAGACCG  1702

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1703  ATATTACTCAAATGATCTTGCCAGTGAATGTACAAGTTACAGGTGGAGATAAGTGCTCTGCAGAAAGGAGCATG  1776

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1777  ACTCTTGTGAGAGAAACAGAAGACCATGTTCTGAACTGGGAATCAAGGAAGACTTCCCTGAGGACGTGACCCTT  1850

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1851  GTTTGGACTCTATTCTGTTTATGCTAAGGATTTTAATAAGGAGCAGGTGATGGACATGATCCAGCGTACATTTT  1924

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1925  TAGAGGAATATCATGAGTCCTATCACTTCATCTCCTAAATATTTCTGACATCTGTTCTCTTTCCTCCATCCTCA  1998

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1999  CGACCTTCACTGGCATGGGCCTCCAACAGCTCACTGTGGGGGAAGTTTCCCTCAAAGGGCACTGATAACACATC  2072

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2073  TTATTAAAACTATACCACATCATTATACCTCCCCAACATAATATGTACATGTATGTATTTGACAATAATATATA  2146

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2147  TGTATTACTGTCCTATTTATTATATACATTAAAAACATTCACAAAAAATTAAAAATCCAAATGGTAAGATTTTA  2220

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2221  CATTTTTGATTTGATAACAATACTTTATTATATTACTAAACATATATTCCTAATTGTCACTAAGATATTATCAT  2294

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2295  GTTAGAGAAATTTGCTTCACTATACTATATCATTTTTTTAAATCTTAGTTTAATACTCTCTGATACAGCAATTC  2368

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2369  ACAAGTCTACTTCCAACTCTGGCTTATTTTGATTCTTTCATGTAATGGCTGTCATAGCTGAAAAGGGACCTCAC  2442

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2443  AGAGACCCAATGGAGGCAGTGTCCTATTGGCTATACTTCCCAAATCAAGCCATTCATTTCTCAATCCCATTCAC  2516

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2517  TAATTTACAGAGATTTACTTATTTTTCATTGCTAGTCTGCAAATGTACACTTAAATGAAGGTCATCCTTAATAA  2590

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2591  TTATGAATGTGAACCCATGAAACCTACTTCATAATTCTGAATTTGTTTTGACAGATTCTTTTCCACAGTTAGAG  2664

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2665  GGCCATTGCTATACCTGACATTGTGGCTGACAAAAGAGCTCTTATTAGGACTGGAAGTGTCAGTTCTACTTTTT  2738

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2739  CTTCTTTCTTTATGCTCATGTTATTATTATTTTTTAAATCTGAAGTTTAGAGGAATCTTTTAACTCTACTTGTC  2812

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2813  TATTTGGGAAGACACACTAAACTAGATAATATAATTTATAAATTCCCTCAACTAAGCACACAGAACTGTAATAC  2886

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2887  ATTGAAATCTGCCAAAGAGAACAAATCAGTGAGGGCACGACTGTATTCCTTTGTGTCTTTTTCAAGACACCTTG  2960

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2961  AGTACTGTAAGTGACAGGGAGCCATCTGATGTACAGGCTGAAGGGGGCCACCATCAACCTAGTAACCTAAACAG  3034

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3035  AAGTTCCAATATTTTCACCCTGCAGTCCACTTTGTAACCTTTTCTTAGCCTTCCACAAGAGTCTCCTAACTGGA  3108

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3109  CTCCCTCCATCCACTTCTGGGCACCTAATGTCTCTACTACAGATTAGAAATTACTTTCACAGAAGGCCATTTCT  3182

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3183  GAAACCCAAACTAGCTTATGTGTTACCCTACATTGAAATTATTCAGACGCTGTCTTCCCCAGTAATCTGCAAGT  3256

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3257  TTCACAAAGGTAGATGCCATGTTCTTAATGGTTTCCCAGCACATAGCACATAACAGAAGCTCAATAAATATTTG  3330

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3331  TTGAATGAATAAATGAGTAAACAGAATATTTTTACAGTTAAATACCTTTAATTCTTTTATTTTTTTTAAATTTC  3404

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3405  AAGTCCTTAGAGGAGGAAGAATTGAAAAAATATGAAATATCAAATATACATTTAGCTAAATTTTTAAAGTTTAG  3478

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3479  TAGGCTATATGCATAAATCAAATGAATAGCAATATTTGGAACTGTAACTATTTTTGGAATCTTGTATGAATAAA  3552

Query  250  --------------------  249
                                
Sbjct 3553  TTACAAGTTTAAAACATCAA  3572

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