Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001749102.1
- Aligned Length:
- 3572
- Identities:
- 217
- Gaps:
- 3323
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCACCTGCCCCTCTCCCTCCCGGGGCCCGGCGGCGTGTTCGGAACCCAGCTGCGGCTGCAGCTGGAGAATGAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCCTTAGGGATGGGGGTGGGGCGGCTAAAGGGGCACCGGCGGAGGACAGGAGGGCTGTGCGTTCCGCTGGGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCATTTTGGTGGACATCCAAAGGTGATACAGCTGGAAAAAGGATCTTCATCCAAGACAAAGAGAAACAAAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATAGGAAAGTGATGAAAGGCATCAAGCAAAGTGAAGATGCAAATGAGAAAACAAGATCAGAAGACAGGAATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTGAAACAAGTCACAAATGCATAGTATGACCTCTCAGGTAAGGACCAGGGCTGGATCATCCCAGGATGTTCAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCATACTCTCAGGGGGCGCTGTGTTATACTGAGATCTTGCTAGGCAAAAACATGGTTTTTGTCTTTTCTGTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAAGGTACCTTTTGGGAGGCCAGGCGCGGTGGCTTACTCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGATCACCTGAGGTAGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCCTTCTCTACTAAAAATACAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATTAGCCAGGTGTGGTGGCACATGCCTGTAATGCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTAAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCAGGAGGTGGAGGTGGCGGTGAGCCGAGATCATGCCATTGCACTCCAGCTTGAGCAAAAAGAGCAAAATTCCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTCAAAAAAAAAAAAAAAAAAGAAAGAGAAAGAAAGAAAAAGAAAAGAAAAGGTACCTTTTGGGAAGAAGCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAAAAAAATTTTTTTTTTCCGCTGGCAGTATTTAGGAAGAAGAATTCTATTTATTACTTCAGTAGAGTAACATG 888
Query 1 ---------------------------------------------------ATGGAGTCTCGCTCTGTTGCCCA 23
|..|||||||.||||||||||||
Sbjct 889 CTTTACTAAAATAAGCTTCCATTCTACATGGTTTTTTTTTTTTTTTTTTAGACAGAGTCTCACTCTGTTGCCCA 962
Query 24 GGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCA 97
||||||||||||||||...|||||||||||||||||||||||||||||..|||||.||.|.||||.||||||||
Sbjct 963 GGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCGAGTGTTTCTCCTGCCTCA 1036
Query 98 GCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGG 170
||||||.|||||||||||||||.||...|.|||||||||.||||||||| |||||||.||||.||.||||||||
Sbjct 1037 GCCTCCCGAGTAGCTGGGACTACAGGAGTACACCACCACACCCGGCTAATTTTTGTAATTTTAGTAGAGACGGG 1110
Query 171 G-TTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGT 242
| |||..||||.||.|||||||||||||.|||||||||||||||.|||||||||| .|||.|||||||||||||
Sbjct 1111 GATTTCACCATATTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGT 1184
Query 243 GTTGAGA------------------------------------------------------------------- 249
|.||.||
Sbjct 1185 GCTGGGATTACAGGCATGAACCACTGCGCCTGGCCCATGATTGTTCTTAAAATAAGAAACACCACATAATATTC 1258
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1259 AGTGTTCCTTATTTTGAAGGGCTCTTTATTTGGTTATATTTTAGGCATATGAAGCTATTTCATAATCCCAAAAG 1332
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1333 GGGTATTTAATGAGATTTAGAATTGATAGTCTTCTGTTGATATATATTTATAGTTATTTATACACATATTTGTA 1406
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1407 TGTTCTTAAAATAAAATGTTCAAAGTTTTTGATTCAAATGTAACATGTCTAAAATTGAAATCATTGTTTTTTTG 1480
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1481 TTTTTTTTTTTTCACAACTCAAACCCTCTTCTTTTCCCATAAACACCATATTGGGAAATGGCACCACCATGGGC 1554
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1555 ATAGTTGCTCAAGCTAGAAGGATGGGGGTATTTTGGCTCATCCCCTTCACTCTTCACATCTAATTAATTCCCTC 1628
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1629 TTTTGAGTAACATTTACTAAGTGCCAGGCCTTCTGCTAGTCTTTCGTGAAGCTTGGAGTTAGAGTGAGAGACCG 1702
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1703 ATATTACTCAAATGATCTTGCCAGTGAATGTACAAGTTACAGGTGGAGATAAGTGCTCTGCAGAAAGGAGCATG 1776
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1777 ACTCTTGTGAGAGAAACAGAAGACCATGTTCTGAACTGGGAATCAAGGAAGACTTCCCTGAGGACGTGACCCTT 1850
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1851 GTTTGGACTCTATTCTGTTTATGCTAAGGATTTTAATAAGGAGCAGGTGATGGACATGATCCAGCGTACATTTT 1924
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1925 TAGAGGAATATCATGAGTCCTATCACTTCATCTCCTAAATATTTCTGACATCTGTTCTCTTTCCTCCATCCTCA 1998
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1999 CGACCTTCACTGGCATGGGCCTCCAACAGCTCACTGTGGGGGAAGTTTCCCTCAAAGGGCACTGATAACACATC 2072
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2073 TTATTAAAACTATACCACATCATTATACCTCCCCAACATAATATGTACATGTATGTATTTGACAATAATATATA 2146
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2147 TGTATTACTGTCCTATTTATTATATACATTAAAAACATTCACAAAAAATTAAAAATCCAAATGGTAAGATTTTA 2220
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2221 CATTTTTGATTTGATAACAATACTTTATTATATTACTAAACATATATTCCTAATTGTCACTAAGATATTATCAT 2294
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2295 GTTAGAGAAATTTGCTTCACTATACTATATCATTTTTTTAAATCTTAGTTTAATACTCTCTGATACAGCAATTC 2368
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2369 ACAAGTCTACTTCCAACTCTGGCTTATTTTGATTCTTTCATGTAATGGCTGTCATAGCTGAAAAGGGACCTCAC 2442
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2443 AGAGACCCAATGGAGGCAGTGTCCTATTGGCTATACTTCCCAAATCAAGCCATTCATTTCTCAATCCCATTCAC 2516
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2517 TAATTTACAGAGATTTACTTATTTTTCATTGCTAGTCTGCAAATGTACACTTAAATGAAGGTCATCCTTAATAA 2590
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2591 TTATGAATGTGAACCCATGAAACCTACTTCATAATTCTGAATTTGTTTTGACAGATTCTTTTCCACAGTTAGAG 2664
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2665 GGCCATTGCTATACCTGACATTGTGGCTGACAAAAGAGCTCTTATTAGGACTGGAAGTGTCAGTTCTACTTTTT 2738
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2739 CTTCTTTCTTTATGCTCATGTTATTATTATTTTTTAAATCTGAAGTTTAGAGGAATCTTTTAACTCTACTTGTC 2812
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2813 TATTTGGGAAGACACACTAAACTAGATAATATAATTTATAAATTCCCTCAACTAAGCACACAGAACTGTAATAC 2886
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2887 ATTGAAATCTGCCAAAGAGAACAAATCAGTGAGGGCACGACTGTATTCCTTTGTGTCTTTTTCAAGACACCTTG 2960
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2961 AGTACTGTAAGTGACAGGGAGCCATCTGATGTACAGGCTGAAGGGGGCCACCATCAACCTAGTAACCTAAACAG 3034
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3035 AAGTTCCAATATTTTCACCCTGCAGTCCACTTTGTAACCTTTTCTTAGCCTTCCACAAGAGTCTCCTAACTGGA 3108
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3109 CTCCCTCCATCCACTTCTGGGCACCTAATGTCTCTACTACAGATTAGAAATTACTTTCACAGAAGGCCATTTCT 3182
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3183 GAAACCCAAACTAGCTTATGTGTTACCCTACATTGAAATTATTCAGACGCTGTCTTCCCCAGTAATCTGCAAGT 3256
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3257 TTCACAAAGGTAGATGCCATGTTCTTAATGGTTTCCCAGCACATAGCACATAACAGAAGCTCAATAAATATTTG 3330
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3331 TTGAATGAATAAATGAGTAAACAGAATATTTTTACAGTTAAATACCTTTAATTCTTTTATTTTTTTTAAATTTC 3404
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3405 AAGTCCTTAGAGGAGGAAGAATTGAAAAAATATGAAATATCAAATATACATTTAGCTAAATTTTTAAAGTTTAG 3478
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3479 TAGGCTATATGCATAAATCAAATGAATAGCAATATTTGGAACTGTAACTATTTTTGGAATCTTGTATGAATAAA 3552
Query 250 -------------------- 249
Sbjct 3553 TTACAAGTTTAAAACATCAA 3572
