Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001755381.2
- Aligned Length:
- 5131
- Identities:
- 217
- Gaps:
- 4883
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCCAGCTTTCACAGCCATCGCTGACTGGGAGCAGGAGACCCCTCCCCACTCTACTTCCACTGCCTGAGCTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCATGCCTCACAGCCCAGTAAGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGTGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGCTGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAAGGCATTCTTCAGCCGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATAT 2368
Query 1 -------------------------------------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGA 30
|||||||.||.|.| ||||||||||||||||
Sbjct 2369 TTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGA 2442
Query 31 GTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCA 104
|||||.||||.|.|||||||||||.||||||||||||||||||||||.||||||||||.||||||||||||||.
Sbjct 2443 GTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCC 2516
Query 105 GAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGACGGGGTTTTGCC 178
.|||||||||||.||.||.||||||||||||.|||.||||||||||||||||||.||.||||.|||||||..||
Sbjct 2517 AAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCC 2590
Query 179 ATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC--ACCACCTCGGCCTCCCAAAGTGTTGAGA- 249
|||||.|||||||||.|||.|.||||||||.||||.|||| || .|||||||||||||||.|||||.||.||
Sbjct 2591 ATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGA-CCTGCCCACCTCGGCCTCCCGAAGTGCTGGGAT 2663
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2664 TACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATG 2737
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2738 GAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATG 2811
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2812 CCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATA 2885
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2886 TTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTC 2959
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2960 GGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTG 3033
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3034 TATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGC 3107
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3108 TGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAG 3181
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3182 ACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATG 3255
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3256 GCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTG 3329
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3330 GCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGA 3403
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3404 TTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGC 3477
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3478 TGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTG 3551
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3552 GTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAA 3625
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3626 GCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGC 3699
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3700 CTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTC 3773
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3774 ACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGA 3847
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3848 TTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAA 3921
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3922 GGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATT 3995
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3996 GCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAG 4069
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4070 TAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAG 4143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4144 GTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGAC 4217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4218 CCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGC 4291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4292 AGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCC 4365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4366 TCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAG 4439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4440 ATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCAC 4513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4514 AGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACC 4587
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4588 CCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAG 4661
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4662 GTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAG 4735
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4736 ATTGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCT 4809
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4810 TGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAG 4883
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4884 GGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGC 4957
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4958 CACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCA 5031
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5032 CAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTT 5105
Query 250 ------------------------- 249
Sbjct 5106 CATTGCTTAAAGCAACAAGCATGTA 5130
