Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001755384.1
- Aligned Length:
- 4977
- Identities:
- 217
- Gaps:
- 4729
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCAGCTTTCACAGCCATCGCTGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCACGGGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGTTGGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGGCCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGACACAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTTTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAGGCTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGTGTGGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCCCACACA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATATTTTTTG 2220
Query 1 -------------------------------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAG 36
|||||||.||.|.| |||||||||||||||||||||.
Sbjct 2221 TAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAA 2294
Query 37 TGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAG 110
||||.|.|||||||||||.||||||||||||||||||||||.||||||||||.||||||||||||||..|||||
Sbjct 2295 TGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAG 2368
Query 111 CTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTA 184
||||||.||.||.||||||||||||.|||.||||||||||||||||||.||.||||.|||||||..|||||||.
Sbjct 2369 CTGGGATTACAGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTG 2442
Query 185 GTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC--ACCACCTCGGCCTCCCAAAGTGTTGAGA------- 249
|||||||||.|||.|.||||||||.||||.|||| || .|||||||||||||||.|||||.||.||
Sbjct 2443 GTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGA-CCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAAG 2515
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2516 GGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTCT 2589
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2590 CTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATTC 2663
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2664 TCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATATTTTTA 2737
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2738 GTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGGCCTC 2811
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2812 CCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTATGTT 2885
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2886 TAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCC 2959
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2960 CCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAGACTGTT 3033
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3034 AGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTGT 3107
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3108 TTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCCA 3181
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3182 AGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTAG 3255
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3256 TTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAGT 3329
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3330 GGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCAC 3403
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3404 TAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTCA 3477
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3478 CAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCAG 3551
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3552 GATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTAC 3625
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3626 ACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGATTCCCA 3699
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3700 CACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCGC 3773
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3774 CACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTCA 3847
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3848 GGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGTT 3921
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3922 TCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCGG 3995
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3996 CAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTTC 4069
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4070 CTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTCC 4143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4144 TCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACCA 4217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4218 CCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGATGCCA 4291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4292 GACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTCT 4365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4366 CGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAGA 4439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4440 GCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCTC 4513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4514 AATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAGATTGCA 4587
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4588 CTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTGG 4661
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4662 CCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGGCATC 4735
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4736 AGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAGA 4809
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4810 AAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGAA 4883
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4884 AGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTTCATTGC 4957
Query 250 ------------------- 249
Sbjct 4958 TTAAAGCAACAAGCATGTA 4976
