Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001756658.1
- Aligned Length:
- 4603
- Identities:
- 216
- Gaps:
- 4355
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTGACCTCATGATATGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCATGCCCAGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTTTATAAGGTTCATCCCATTATTGATATTCTCTAATTGGTGAGACATTGTTCCCACACTTTCGTTAGTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTGACATGGTTCTTTTCTTTTTCTTGGGAGAGGGTCTCTCTGTCGCCCAAGCTGGAGTGCAGTGATGCAGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGCTCACTGCAGCCTCAACTTCCTGGGCTGAAGTGATCCTCCTACCTCAGCATCCTGAGAGGCTGGGACCATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCAGCCAGCTAATTTTTTAAATTTTTTGTAGAGATGGGGGTCTCACCACATTTCCCAAGCTGCTCTCAAACTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGCTCAAGCAATCCACGGGCCTCAGCTTCCCAGAGTGCTAGGATTATAGGTGTGAGCCACTGCACCAGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACACGTGGTTTCTCCCTTTGAAGTACTAGCCAGGCCTGACCATGCTTAGCTTCCGAGATCAGCAGGTTCCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGTGCAGCCTCAGATGCAGCATGTTTTAGGTCTTTGAACATATTTAAATGAGCTGACTGAACGTCTTTGTCTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAATTGCAGCATCGGGCTGGTCCCATTGGTGACTTTTCCCGTGTCTGGGTCGTCCTTTCGGTTTCCTTTCCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCTCATAATTTGTTAAAACCTGGACATTTCACGGGCGATAATGTGGCAACTCCGGAAGTCAGATTCTCTTCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCAAGGATGTGTTGTTGTTGTTGCCTGTTGGAGCTGTTTCTTTGCTGGGTGACTTTTCTGAACTAATTCTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTAAGCATTAATGTCTCCATTCCCTGCGAGCTGTGGCCACTGAAGCCGCTCTTCAGTTACGGCAGTGGTCAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATGACTGGTCAGAGAGTTCCTTAGGTGCCTGGAAGCGAAGTCTTTGCCGAGTGGGTCTCTCTCTGTGTGCCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCGTGGCTTCAGTGCTCGGCTAGGCAGTGCTCAACTTTCCCTTAGCCGTCACCTGCTGTCTGCACAGCACCTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGTCAGTCACGGGTGAGGGCTCAGGGCCTTGCCGGCCTTCCTGAATATGGGCACAGCTGCAGACAGCCTTACCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGTGCAGGGCACCTAGATTCCCAAGAAGGGGCAAGAGCTGTTCAAAACCACTACAAGCTGGACATGGTGGCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACACCTGTAGTGTCAGTGACTCAGAAGGCTGTAATGGGAGGATGACTTGAGGCCAGGAGTTTGAGACCTAGCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACCCCATCCCCCACCCAAAAAAACAAAAACAACAACAAAAACTCACTGTGGACCGCTCATGCCCCAGCTGCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTTTAACCCCAGCTGTTATCCATCACCACAGGCAGCTTCGATTTTCAATCATGGATCTGATGACTTTCAACA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AACTTTCCTGAGGAAAGTGCTGTTCCCACCAGAAGAGATCTCAGGACAAATGTAGACAGCCCTGGCAAGTGGGG 1480
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1481 TCTCCCTGGGAGCTAGCAGACAGGTGAAAGACTGACAGTTCTTGGGGAATTAGGCTTTTCTTTTGTTTTGGAGA 1554
Query 2 TGGAGTCTC--GCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCA 73
|||.||.|| .|| |.|..|||||.||||||||||.|||..||||||||||||||||||||||||||||||||
Sbjct 1555 TGGCGTTTCATACT-TATCACCCAGACTGGAGTGCAATGGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCCA 1627
Query 74 GGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA- 146
|||||||||.|||||.||||||||||||||.||||||||||||.||.||.||..|||||||||||||.|||||
Sbjct 1628 GGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACGCCCAGCTAAT 1701
Query 147 -TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGAT 219
||||||||||||.||.||||||||||||..|||||||.|.|||||||||||.||||..|||||||||.|||||
Sbjct 1702 TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACATCTGACCTCAGGTGAT 1775
Query 220 CCA-CCACCTCGGCCTCCCAAAGTGTTGAGA------------------------------------------- 249
||| |||.|||||||||||||||||.||.||
Sbjct 1776 CCACCCATCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCCTGCCCAGCCCAATTATAGATTTTT 1849
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1850 TAGGTTTAGGTGTTGACAGTAGCTCTCACCTCAGCCTGTTCTCTCTCCTTGTCATGCAGCCCACAGGGGAGATG 1923
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1924 GTCAGGCCAGTGTGGGGGCTAATGAATAAATGCTACACTGTGCCCACTCAGGTGGGTAAGGGCTGGCACTCCTC 1997
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1998 TTCCCCTGGAGTGGGGCGGCTGTGCTGGCACCCTTGGCAGACACAGTAAGGGGGACTGCACCTGGAAAGGATGG 2071
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2072 GCCAGTCGGGGCAGGACTACTCATCACTCATAGTGTGGGTGTCAGGGTTGTGTCACCCCTCCCACCTCCCTCTG 2145
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2146 CAGAGACGCAAAGTCAAGAGTAGGAAGAAGCCAACCTCTGAGGTCACGACCCCCAGGAGACCTGGAGGACTGAA 2219
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2220 TGCTGCTGCCCCCAAGGAGGAGGCTGCCGTCTTATCCCAGGAGGGAGAGCAGGTGAAGTCCCCAGGGGAGGAAG 2293
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2294 CACCTAGCCCCATTCCTGCTGAGCAGGAGGTGGCAGGTACCCCAGACTGGGAGGTAAGGACAGCCCGGGGCTTC 2367
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2368 GACTGAACGTCTCCAGCGTGGGTCCAACTGAGCAGCCATGGAGCACTGCAGAGTGGGAGGCAGCAGGGCAGGGA 2441
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2442 GGCAGTGCTGGAGGCTGGCTCAACCCCAAGACCAGCAGGCCAAGCTGCCATCCCAGGGGAGCGAGGACGTCTGT 2515
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2516 GCAGAGCTGAGAGGCAGCAGCCATGTGTGAACAGACTGGGCCTCATCCTGGCCCCACCGACTTTGTGTGGACAG 2589
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2590 AGCCTGTTTCCCTGTCTGTGCAACACAGAACCTGCCTGATCTCACTGCTGGATCCCTCTTCTTCCTGCCAGGAA 2663
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2664 AATAAAAAGGTTCAAAAGGAAGTTGCTGCGTATCCATCTGAGGCCTCTGAGGACAGCAAAGAGCAAAGGCCCTG 2737
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2738 GGACCGGGTCTACGTGCCCATGACAGAGCTCTGGCTGGACTGGTTCTGAGCCTCTAACACCCCCAAGACTCAGA 2811
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2812 ACCGTGAAGAAAATCTTTCCAATAAATCCAAGAGTTGCTGCTGCTATAGGCCAGGCTGCCACCTTTCGGGGCCT 2885
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2886 CCGTCTTCAGACAAACCCAGCCTGGCTTCATCCACACTCCCTGTCCCCACAGCTGCAGGAACAGCACTTCCTGC 2959
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2960 CACCGAGCCGTGTGACCACAGTGGATTGTCTCTGGAGGGGCCCAAGGGGGCCCTGGCCACCCTTCTGACTGACT 3033
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3034 CGGTGCCAGGGGACAGACCAACGTCCCTCTCGTGCTGACAGCCGGGCCGCACCCTGGCATGAGGGCATTTACAG 3107
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3108 AAATGCTGGCGGAACTGCTGCCAGGGAGGCTGTAGGGTCCTCTGGCAAAAGAGGCCTCAGGTGGCTCCTCAGAG 3181
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3182 TGTCTGTGGTTCTCTGTCCCAGGCTGTTCCCTAAGAAGGTCTGCCCAGGACTCAGGTAATCATATGCTCATTAG 3255
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3256 AAACTCTTGGGCACTGCCTGTGTGCCCAGCCCAGCCCATTATGTCGGTGAGGACAGATGTGGAGGACAGCAGTC 3329
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3330 CCTGCCCTTGGTTGGGGCTCCAGGCCAGCAAGGGCCACAGCCCCAGAAGGCAGAGCAGGAAGACAGGACTCGGG 3403
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3404 GCAGGTGAAGCAGCCTTCTCGTTGGCAGAAGGGAAACAGAAGCCCGGGGTGGGGAAGGGTGGGGAAGGGTGGGC 3477
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3478 CCGGGGTCACACGGGGTAATGGCAGAGCAAGGACTAGGGTCAGGGTCTCTGGCTCTCAGCTGCCCATGCCACCT 3551
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3552 CCTCCTTCTCTGCCCGCCCCAGTGCCTTATGGGTCCAAGGTTGACTCCTGTCCCTAGGGCAGGCCTGTGGGCCC 3625
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3626 TGCCTGATCCCTACTGGGAGGATGGTACCTAGGGTTGGAGCCAAACAAGTGTCCTCCTCCAGCGCCAGCCTGGC 3699
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3700 CCTGAGTGCGAACTCGTCACTGGTCAGGGGTCCAGACAGCAGCATCCCTGAGGGCCCAGAGAGGTGGCCAGTCC 3773
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3774 TGTGGTGAGGTTGAGAGGTGTCAACGTGCTGGCGGTCCTCGCTCGCTCTCAGCGCCTCCTCGGCCTCAGCTTCT 3847
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3848 GCTCTGACCACACTTGAGGAGCCCTTCAGCCCAGCGCTGCACTGTGGGAGCCCCTCTCTGGACTGGTGGAGGCT 3921
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3922 GGAGCCGGCTCCGTCTGCTTGCGGGGAGGTATGGAGGGAGAGGCGTGTGCGGGAACCTGGGTTGCTCGCGGGCC 3995
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3996 AGCACCAGTTCTGGGTGGGCAGGGGCTCAGCGGGCCCTGCACTCGGAGCGGCCGGCTGGTGCCTCTGGCCCCAG 4069
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4070 GCAGTGAGGGGCTTAGCACCTGGGCCAGCAGCTGCAGAGGGGGCACCGGGTCCCCCAGTACTGCTGGCCTGCCG 4143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4144 GCGCTCACCACACTTGAATTGTCGCCAGGCCTCAGTCACCTCCCCGCGGGGCAGGGCTCAGGACTTGCAGCCTG 4217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4218 CCATGCCCAAGCCTCCCTACGGTGGGCTCCCTGCGAGGCCCAAGCCTCCCGGATGGGTGCCTCCCACTGCTCCA 4291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4292 CGGCACCTGGTCCCGTCCACTGCCCAAGGGCTGAGGAGTACAGGTGCCTGGTGTGGGACTAGCAGGCAGCTCTG 4365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4366 CCTGTGGCCCTGGCATAGGATCCACTAGGCGAAGCTGGCTGGGCTCCTGAGTCAGGTGGGGACTTGGAGAACTT 4439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4440 TTATGTCTAGCCAGAGGATTGTATATGCACCAATCAGCACTCTGTGTCTAGCTCCGGGTTCGTGCATGCACCAA 4513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4514 TTAGCACTCTGTATCTAGCTAATCTGGTGGGGACTTGGGGAACCTTTATTTCTAGCTAAAAGATTGTAAATACA 4587
Query 250 --------------- 249
Sbjct 4588 CCAATCAGCACTCTG 4602
