Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_002956446.1
- Aligned Length:
- 4047
- Identities:
- 215
- Gaps:
- 3802
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTACCAGACAAGAAGACAAGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAACTTTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAAGGGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCGCTCCC 814
Query 1 ------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGG 50
|..|||||||||||||||||||||||||||||.||||||...|||||.||
Sbjct 815 CACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCTTGG 888
Query 51 CTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGAC 124
|||||||||||||||||||||..|||||||||||||||.|||||..|||||||.||||||||||||.| ||
Sbjct 889 CTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATT----AC 958
Query 125 ATG----CACCACCACGCCCGGCTAATTT-------------TGTATTTTTGGTCGAGACGGGGTTTTGCCATG 181
|.| |.|||||||.||.||||||||| |.|||||||.||.||||.||||||||||||||
Sbjct 959 AGGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTGCCATG 1032
Query 182 TTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA----- 249
||.|.|||||||||||.|||||||||||||||||||||||||| .|.|.||||||||||||||.||.||
Sbjct 1033 TTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACA 1106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1107 GGCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGACATCAA 1180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1181 GCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCAATTGA 1254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1255 AAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAG 1328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1329 ATCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATACAAAAA 1402
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1403 ATTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACC 1476
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1477 TGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAACTGTCT 1550
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1551 CAAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGAAGACT 1624
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1625 AGATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCACCCAT 1698
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1699 TCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTTGCAGT 1772
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1773 GGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTT 1846
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1847 AGCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTG 1920
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1921 GAAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGT 1994
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1995 GCAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCC 2068
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2069 AAGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCAAAGGA 2142
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2143 ACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTT 2216
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2217 TCCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGGTGATGTTTGACAGT 2290
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2291 GGCTGCCTGCCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTCACCCACATCAACCCACATGGGAT 2364
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2365 ACTTTATTTATTTATTTATCTATTTATTTATTTATTTATTTATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAG 2438
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2439 GCTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAG 2512
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2513 CCTCCAGAGTAGCTGGGACTACAGGAACACACCACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGAT 2586
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2587 GGGGGTCTCTCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAA 2660
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2661 AGTACTGGGATTACAGAATCGGCTCCCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGA 2734
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2735 GGCCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGC 2808
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2809 ATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCA 2882
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2883 GCATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACC 2956
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2957 CGGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACT 3030
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3031 CCCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCC 3104
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3105 GCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCG 3178
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3179 GCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCG 3252
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3253 AGCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCA 3326
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3327 CTGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGTGC 3400
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3401 ACCACCAGGCCCAGCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGG 3474
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3475 CTGGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGC 3548
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3549 TACAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAAC 3622
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3623 CACAGCAGTATATTATGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATC 3696
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3697 CCAGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATG 3770
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3771 AAACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGG 3844
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3845 AGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCA 3918
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3919 GCCTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATT 3992
Query 250 --------------------------------------------------- 249
Sbjct 3993 GAATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA 4043
