Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_935293.2
- Aligned Length:
- 5016
- Identities:
- 217
- Gaps:
- 4769
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAGGTGTTGGTGCAGAACGGTTAAGAAGGCTCCTTCTGTACCAGAAGTGAGGCCCAAGTAGGAGCTTATTCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTCAGTGGAAATCGTGCAGACCTTCCAGAAGGGAATGATGTAATTGGAAAGCATTTTTGGATACTGCACGGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCGTTTGAAGAAAAAACTGGAGAGATGGGGGATGGAAGCCTGGGAGTCACATTTTTTCAAGCAAGACATCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGGTGAGGCCCAGTGACAGAGATGACAGATATTCAAAGATGGAATGAAAGAGGTTTGGTGACTGGATATAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAACGAAACAGGAAGAATTGAATTTGGGTCTGATATTTCCTGGATGCAAGATCAGGAGGATGTTGGCACCATGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTAGTGGGGAAACTGGGGACCGATTCTGGAGGTATACCAGCATGGTGAGTTTGGTTTTAGATGGGTTGTGTTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACATAGGGCTAGCAATTCTAAGTGAAGATGTCTAAAGAAAGATAGAAGTGACTCAGCTCTGAAGTTCTGAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATCAGCCATCAGCGTGGCATGAGGAAGACCTAGGAACAGACAGACTGGGGAGAAGACACAGAGCCAAGCAGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTGGCCTGCAGCCCAAACCCTGTGGAATCCCTACATTCAAGGACCAGGTTGAAGTGAAGCCATTGACAGGAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAGATGCAGTAGTGTTCTGGAAGTCAAGTGAGGAGGAGGATTGAAGAAGAGGGGGGTTGCCCAGTGGAAACAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGACTGCAAAGCTTTGAGAAGTCTGTATGAGATGAACAACTGGAAAAGGTTCTTCGTGAAGAATTTGTGTGGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAAGAGCTGGAATAGCGGCTTGAGGGAGAGAAGCCAGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTACAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGTGTGATCCGGGCTGACTGCAAGCTCTGCCTCCCGAGTTCACACCATTCTCCTGCCTCAGTCTCCCGAATAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGGACTACAGGCTCCCACCACCACACCCGGCTAATTTTTTGTACGTTTTTTTTTTTTTAGTAGAGACAGAGTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACATTGTGATCCACCCGCCTTGGTCTCACAAAGTGCTGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTACAGGCGTGAGCCACCGCACCTGGCCATGTTGATTTGTTTTAATGGTAGTTGCAATACTTGTGAGAGTGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATCCACCTGGATGCTGACTTGAATGGAATTTCATAACTGTTGGGTACTGACCATGAGTTGGTGTGGGGACATAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAGTTGAACAAGACATAGGCTTGCCTCATAGTGTCTACAGCCTGGAAGAGGGAAGAAAGTGACAACACAAATA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTTCTGCATCTTATGAATTCATGGGAAGAGGAGAGGTGTCATAAGACAGGTATGCAGTGCTGCAGAGGTTTGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGGTTGGATCAGGTTGGGGTGTGGAGGGCGGGGAGGGAAGGAGTTCAGAGAACCTTTCCTGAAGAAGGTAGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCTGAGCGGACATCAAAGGTGAGCAGAAGCTGCGTAAGCTGAGAGAGGGTGGAAAAGAGGGCGTTTCCAGTGGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGACTTAGCACAAGCAAAGACAACAAACCCTTGGGCCTGTAAAGGAAACAATAAATTAATTTGTCTAGAATGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GACAGTAGTGGAATATGAGATTCAACGACTGTCCTAGCTCTTTTTGAAAATTTTGCTTTCTACATAGTTACTTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATAGCTCCAATCTGGAAACAACCCAAATGTTCATTAACAGAAGACTGGATAAACAAATTGTGGCATATCCAGAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AATAGAATGCTACTGAACAATTAACAAAACTGTAGACACAACATCAACAAACCTAAAAATAATTATGTGTCATG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AATGAAACCAGAAAAAAGAATAAATACTTCATGATCTCATTTATAAGAAAATTCTAGATAAGGCACAAACTAAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTACAGTTAATATGTAGTTTCCAGGGGATTCGTTATCAGTAGTGCAGAGAGAAGAGGATTATAACAGACATGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTAATGTGTTGGGTGATAGATATGTTCATTATCATAGCTATAGAGATGGTTTGAAATATATGTACATGAAAAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTATCAAACTGTATACTTGCAACATGAGTTTTATTGCATGTCAATTATACTGCAATAAGGCGTTTAAAAAAGGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTCTACATAAAAATACAAATCCACTTATTTTAGAAAACCAGAAGTTTTGGCAACCGTATGCTGATTCTGCCATC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCCAGCCTGATTCCTTGGGAGAGGTTAACCTTCCACAGTGGTGGCAAAAGTCAGCAGGCAATGAAGGCTATTTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CACCTGAGTCACCAGAAAGAATGGCTAGGTCATAAGCCACATGGCTGGACTCTATCTACCTCCCTGTAATCTCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACTCTTTCACCTGTGCCAGCAATGGTTTAGAGATGAACAGACCATAAAGACTATGGAAATCCAATAATCTTTAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGCATTTGCTCTGTCAGTGACATTTGCCATAGGAGAGAGAGAGATTTGGAATTTATAATTTGTACACCCTGATT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTGCACAGCCTTAGTCTCTGACAATGTGTGAATGCATATTTGGAAGGGACACATTCTCCCAGTTTACTGCAATA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCCTCGCTCCCTATTAATTACACCCAGTGATTAAGCCCACAATGCCTTTTAAATTTTCCCAGCAAGCCTTGTAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AACAATCCAAATCAGGCCAAAAGTAGGAGGAGAGCTATTTTCTTCCTGCCTGCTTTCCCTCTGAGCATACAAAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTGGAGGCCCCATAACAACTGCTCCCCTCTTCATGCTGGCAGAGCCTAATTATTTCTCAACTTATCCCTAAACA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAGAATAGATCACCAAAATACTTCAGATGAAACGTAGAGCAGACAGGTCCTGGGCTGGGAATCCAGGAGACTGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGCAACAAATGCAACAAAGAGCATTAAGAGACTAGCAATGTCCATGAAGAAGGGAACCTAATAAGTAAGCTGCC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACAGCTCAAGTCCTCCTGGCCAAAGCCAGGTCATGTCCCTCTATAACCAGCCAGTGAGAAGGGAATGAGGTCCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TAAACGGGTTCGGGGGATTCATGATTCTCTCTGGGGACTGGAGAGAGAGCCTGGAGGTCTCACTTTCTTGAGCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CATCGGGGTGACTGATGGACCCTGCCGGGTGGTCAAGGTGAGATGGCTTCTGGCACAGGTATTGGATGTGACAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AATCCTTGCGAAGGGCCTAGACAGTTAAGGAAGTGCACCCTACCTCCTGAAAGCTCCCTCCATACCTGGCACTA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAAGGTATTATCACCAGTTCAGATATTTTGATATATATGGTTCGCTTCTGTCTGATGACTCCCTGCAAAAAGGC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TACCCTCCAAGCTACCCTCTAGGGTGAGTCATTAGACAGAACAAGGATATAACACATCCCCTGCTCTCCTAAGG 3404
Query 1 -------------------------------------------------------------------ATGG--- 4
.|||
Sbjct 3405 AAATTCTCTCAGTGTGAATTTTCTTGTGCTGAATGAACAAAGATTTTTTTTTGTTTGTTTGTTTTTTTTGGTTT 3478
Query 5 ----------AGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCC 68
||||||..|||||..|||||||||||||||||||||..|||||.||||.|||||||||||||||
Sbjct 3479 GTTTTTAGACAGTCTCAGTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTTACTGCAACCTCTGCC 3552
Query 69 TCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAG--ACATGCACCACCACGCCC 140
||...||||||||.|||||||.|||||||||||||.||||||||||||.||.|| ||.|| |||||||||||
Sbjct 3553 TCTGGGGTTCAAGTGATTCTTGTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCTG--CCACCACGCCC 3624
Query 141 GGCTAA---------TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCC 205
.||||| ||||||||||||.||.||||.||||||||||||||||.||||||||||||||||||.||
Sbjct 3625 AGCTAATTTTTTTTTTTTTGTATTTTTTGTAGAGATGGGGTTTTGCCATGTTGGTCAGGCTGGTCTTGAACCCC 3698
Query 206 TGACCTCAAGTGATCC-ACCACCTCGGCCTCCCAAAGTGTTGAGA----------------------------- 249
|||||||||||||||| .||.|||.|||||||||.||||.||.||
Sbjct 3699 TGACCTCAAGTGATCCTCCCGCCTTGGCCTCCCAGAGTGCTGGGATTACAGACATGAGCCACTGCGCCTGGCCT 3772
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3773 CAATGAGTAAATGTTTTGCTAAAAAATTTCCCACACTGCCTCAGCATAAAGCCTTACTTCAGTGTCAACTTTTG 3846
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3847 GTGCTGAACAAGGCACTCCTTGGCTGAAACCTTCCCACATTCTATGCATTCATAAGGCTTTTGCAGGGTGAACT 3920
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3921 TTCTGGTGCTGAGCAAGGTTAGAGGGACAGCCAAAGGCTCTCTCACATTGTCCCCACTCATAAAACCTTTCTGT 3994
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3995 GTTGTGAACTTTCTGGTGCCCTGCAAGGTGGACATTTCTGCTGTAGGATTTCCCACACCTGCTGTACACATAAG 4068
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4069 GGCTTGCTCCAGAGTGAAGTCTCTGGTGGTGAACAAGGCTGGAGCTCTGGCTAAAGGATTTCCCACATTCTTTG 4142
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4143 CACTCATAAGGACTTTCTCCAATATGGGTTCTTTGATGTTGACCAAGTCCATATTTGGAGCTCAAAGATTTCTT 4216
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4217 ACGCAATGTAAATTAGTATAACCACTATGGAGAACAGTTTGGAGGTTCCTCAAAAAACTAAAAATAGAGCTACC 4290
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4291 ATATGACCCATCAATCTGACTTCTAGTTATATACCCCAAAGAAAAGAAATCAGTACATTGAAGAGATATCTGCC 4364
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4365 CTCCCATCTTTGTTGCAGCACTATTCACAATAGCCAAGATTTGGAAGTAACCCAAATGTCCATCAACAGACAAA 4438
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4439 TGGATAAAGAAAATGTGGTGCATATACACAATGGAGTAGTATTCAGCCATAAAAAAGAATGAGATCTTGTCATC 4512
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4513 TGCAACAACATGGATGGAACTGGAGGTCCTTAAGGTTAAGCAAAATAATCCAGGCACAGAAAGAAAACATTGCA 4586
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4587 TGTTCTCATCTATTTGTGAGAACTAAAAATTAAAACAATTGAACTCATGGAGATAGAGAGTAGAAGGATGGTTA 4660
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4661 CCAGAGGCTGGGAAGGGTAGTGAGGGCGAGTGAGGGGGAAGTGGGGTGTTTAATGTGTCCAAAAAATGGTCAGA 4734
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4735 AACAATGAATAAAGTCTAATATATGACAGCAAAAGAGTGTGACTATAGTCAATAATAATCGAATGGTACATTTA 4808
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4809 AAAATAACTAAAAGTGTATATTTGGATTGTTTGTAACATAAAGGATAAATGCTTGAGGTGATGGATACCCCATT 4882
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4883 TACCCTGATGTGATTGTTACACATTGTATGCCTGTATCAAAGTATCCATATACCCCATGAATAAATGTATATAC 4956
Query 250 ---------------------------------------------------------- 249
Sbjct 4957 CTACTATGCACCTACAAAAATTAAAATAATAAAAAAAAGGATTCCCCATATTTGCTAC 5014
