Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_946652.3
- Aligned Length:
- 4132
- Identities:
- 217
- Gaps:
- 3889
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGCCACCCTGGGGAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGAGGGTGGGAGTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGTGCGGGCCTGAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGCCGCACTAAGAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGATGTCGGGAGCTATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCCCGCTGTGCCACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCGTGGCCGCGCGACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGCGGACAGCCCCTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGCCCTGGGTCAGCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCGACAAGAAGTTGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCACGCGGGAGGCCATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTATCCACGCCCTCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAGCCAATACGAAGAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGTCCACCTGGTCATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGATGGAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGACCACCGAGCTGAATTCGCGCGCTGTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGTGGTGCTAACACGCTGGCAGGGGGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGAAAGATGTCGGGGTCACCCGTCCAAAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGGCGAGAACACGCCCTTCGCAGAGCACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGAGCCTAAAGGACCAGGTACAGGAGCTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATGGGAGACGTCCTGCACAAGTCCCTGCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGGGTCGTCTTCCAGGAGATTTGGGAGGAAGCCTATCAGCGAGTGGCTAATGAGCAGGAGATTTATGAAGGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCCAGACAGTTGGCTGCCGAGTGAACCCTCTGTCCCTGAGCTAACCCACATACTAGCAGAGGAGGAAGTCAGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCGGCCACTAACCAGATGCAAATCCCCACACTCTTCCCCTTAGCGCTTGACCGTGCCTCCCAGCTGCTAACTGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTCAAATGATGCATGTGAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGAGAATGCCTACCTGACCACCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCACCAAGCAGATCACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGCTGGAGCCCAGGTTTCAGGCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCCGTGGATGAGCAGTCAGAGAGTCTACAGAACACGCACGACGACAGCAGGAACAACGCGGCCTCAGCCAGGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAATCCAGGAAGTGTCCCGGAAAAGAGAGAGAAGACATCAGAGCCTAAAGGAAACAGCTGGGCTCCGAACGGCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCTCAGAAGAGCCTCTACTGAAAAATATGGATCATCACAGATCCAAACAGAAAAATGGGGGCGATGTCCCCACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGAGGGAACACCCGACTTAGCAAATGGGACCGGTCCCCAGGGTCAGGCTCTTAGAGCAGGCACAAGACTGGGA 2294
Query 1 -----------------------------------------------------ATGGAGTCTCGCTCTGTTGCC 21
|||||||.|||||||||||||
Sbjct 2295 CACTGGACAGAAGGTTGTTCCCATGATGGTTTTTTTTATTTTTTATTTTTGAGATGGAGTTTCGCTCTGTTGCC 2368
Query 22 CAGGCTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGC 93
||||||||||||.|.||| || ||||||||||||||||||||||||||||..|||||||||||||||.||||
Sbjct 2369 CAGGCTGGAGTGTAATGG--TGCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGC 2440
Query 94 CTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCAC----CACCACGCCCGGCTAA--TTTTGTATTTTTGGT 161
||||||||||.||||||||||||.| |||.||.| ||||||||||.||||| ||||||||||||.||
Sbjct 2441 CTCAGCCTCCCGAGTAGCTGGGATT----ACAGGCGCCTGACACCACGCCCCGCTAATTTTTTGTATTTTTAGT 2510
Query 162 CGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCT 234
.||||.|||||||..|||||||.|.|||||||||||..|||.||.|||||||.|||||||||| .||||.||||
Sbjct 2511 AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCAGACCTCAGGTGATCCACCTGCCTCAGCCT 2584
Query 235 CCCAAAGTGTTGAGA----------------------------------------------------------- 249
|||||||||.|||||
Sbjct 2585 CCCAAAGTGCTGAGATTACAGGGGTGAGTCACCGCGCCTGGCCAATGTTGTTGTTGTTTTTAAGACAGAATTTC 2658
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2659 ACTCTTTGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGGCTCACCGCAACCTCCGCCTCCCAGGTTCAAG 2732
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2733 CGATTCTCCTACCTCAGCCCCCAGAGTAGCTGGGATTACAGGCATGTACCATCACACCCGGCTAATTTTTTGTA 2806
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2807 TTTTAAGTAGAGAGGGGGTTTCTCCATGTTGGTCAGGCTGGCCTCGAACTCCCAACCTCAGGTGATCCGCCCAC 2880
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2881 CTCGGCCTCCCAAAATGCTGGGATTACAGGGGTAAGCCACTGTGCCCGGCCGGTTATTTCTTTAAAAGGTAATC 2954
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2955 ATTTGTCAAGAGTAAAACCCAGAAGCTCTGACAGGCCATAATTTCAGATCCTTTGGCTTGGGCAGTTTTGATTT 3028
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3029 TCCCCGTGTTTGCATGGCATGAAGTCTTCGTCCTTGTCACAGTAGCTTGGGATGACTCCCAGTCCACATGGAAA 3102
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3103 ACATCAGGGAGTGACAATCCAGCAAGAAATCCCTCGCTAGTTCCACACCTACGCACCGAGCGTCGGTGTGCCAG 3176
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3177 GCCCTGTGCTGGGCAGAGTGTGGTATGTCAGGGTGTGCCGGTTTTAGGTAACAAGACTCCACCACTGAGTGGCA 3250
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3251 CCTGCCCTATTGCAAAGGAATCCAGTTCCTCCGGAATAACAGTCCCACTGTTAACCTGGTGCTACTGGGAAGTT 3324
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3325 CCACACAGTAATCTGAGCAGTGACTCATGGAAGGATGAGGAACGTTTGCTCCAGCTTCTCTCCCTTTCCAGCAA 3398
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3399 GGGCAGAGCTCCTAAAGCCAGGGGTTAGCACCTGGCCAGCTTATGTGGCAGATGGTCTCAGTTACAACTTCGCT 3472
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3473 GCTTTCCCAAACTCCTGCAGCCCTCCTGAGTCCGACTTCCGTTGATAGCAAGGCACTGGGTGGCAGCAACCTTT 3546
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3547 TTTCTAGTAGTTTTTTCCCAGCAGTTTTCCATTTCTCCACAGTATCCTTTTCATTTAGAGGAGCTTAATAAATG 3620
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3621 CTTTTTAAAAAGTAACCCACGTGACGTAAAATTTTACAAGTTTTTGTGGCAAAATGATGCCCAGATAGTCACAT 3694
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3695 TTAAGCAAATATTCAGCTTGATTCAGTGATTAACAGCAAATGGGTCTACGTGCTAACATGGCAGCACATTCAAC 3768
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3769 ACATAACACATCACTCACATTGACGTCCACTGTCCCTGCACCTGCTACTTCAGGGGCACTGAGGCTCCTGTTCC 3842
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3843 AAGGCCTTACAAACCTATGTGGTGGCCTGCAGGGCAAAAGGAATTATCATTACAACTGGTTAGAGGTAGGAATT 3916
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3917 CAGAAAGAAATTGAGGAGGCCAAACACACGTCGTTTGAGGCTAAAGGCTTAAGACGCTTCTTACCCAAGAGTGA 3990
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3991 CCTCAGAGTTTCACATCCCAGACAATCACACTGTGGTTGAGTGAAATCAAGTGCAGTTTTATTTAAGAACTGGA 4064
Query 250 -------------------------------------------------------------- 249
Sbjct 4065 AAGAATAATCAGTATCTGTGAAAGAAAATCCAATTTAGAATATTTAAATAAACATTTATGTA 4126
