Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_950153.2
- Aligned Length:
- 4508
- Identities:
- 218
- Gaps:
- 4260
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGAGCCACCGCACCTGGCCTATATTAATTTTTAAACATGTTAATTGCTCATTTAAAATAGGTTTCAAAAAAATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATCAAGGAAATACATGTTTATGGCACAAAACTTGGAAAACTATTTTAAAAACTAGAAAGAGAAAAAAGAATCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCCAAATCTACCATTCAGAGCATCGTGGGCAGCCCTCCTAGGCTTGTTTGCTGTACATCTTGCTGGGATTTTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAAGAAGAATCCCTTCTGAAAACTGCATGAAATTCTCTTAGATCTAGATACCGGCATTTACCAGATGGGTTTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAGATGTTAGACATCTCATTCTAGTTTTTCCTTATATAGTAGAGGACATCTTTGTGCGTATATGTTTGTCTACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGTTTTCTTGGCAGTTTCTAAATGTGGGTCTCCTGGTCAAAAGCGCAGGCATTGTTAAAGCCCTCGGTACGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTTCCAGTTGCTTTTAAAAGCTGTCTCTCAATTTACATTCCAACCTGAAGCACAAGGGAGTGCCTATTTGACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGATCTCATGGACGTGATGACTGTCTTTTAAAAATACTTACTAATTAATGAATCATCTTTGAGCACGCCTGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACCTGGAGGCTGGTGCAGAGCTCTGGGGTGCTGTGGGCATCATATCATATTGGCTTCCTGACCTTGGCATCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCCAGCTGACTCCAATAAAGATCCCAGGGGAATGAGGGACAGAGGCCCCAAGTATCGTAACTTATAGGTTGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCAGTTCTCCCTAAACCCAAATGGTATTTGTATGTGTGTAGTGGGGGGATTTAAGTAATTTTAAAGTTTACCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAGGATAAGCTGGAGACAATTACTGAGAATTTTTTGAAAAATGGGAGTGATGAAACAGAGTTTGCCCTTGCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATAATAAGATTTAAGTATTTTATAAAAATAGAAAGAGAAGATAATATAGGCCAAAGCTTATCTGATTTAAGAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGGGAAAGACTTACCAGACATAGACTATAAAGGAGCTACAGAAGAAAAATAGAAATAGCATTTTGAATTCTAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTAAATTAAAAAAAAGCGTGAGCAAAATTTGAAGCTATTTGTTTGCTAAGAACACATATTTGCAACATATAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAAATGATTACTATCCCTTGTATATATTCCTTCATTTAACATTTCTTAAGTGCTTATAATGGTTGATGCACTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTATAAATGCTGGGAATTCAAAAAATATATTAAATACTTTTATATTTCCATAAGAAAGAGATTGAACCTAATGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAAATAGATTAAAGTGTAAGCAATTTACAAAAGGAAAGGTAGAAATGGCCAATAAGCATATGAAAAAAATGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGCTCCGTAATAATCATGAGCGTGTCAATTAGTTCAACAATGAGACATGATTATTCACTCTAAAAGTTAAAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTTTAGAACGATTGAACTGAATTTTGACCAGTTGAAGGGTAAACTGGTTAAAACGTTTTGGACACAATTTGAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACAGTTGTTTAAGATTATTAATATGATATATAATTTGATCTAGAAATTCTAGGACTCTATCCTATGCATTGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTAGAGATGTGGCCAAATTTTATGACAAAAAGTGCTTATCACAGTATTACTACACACACATACACACACACACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AATAGACTCGACCAAGAGCTTTAACATTTGAGTAATAGTTTAATAAATTAAGGCACACTTATACAATGGAATAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TATGTAGATATTCAAAACTTTTTTCTAAGAATATTTAATGCCTGTTACTAGTTAAAAATATGATATGAAATGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATAAATTTTAAAATATATGTGTTCAAAAACATATCTTTTATACATGTTTTTATAACGCAATGTTATATAAAATG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTTATAATGCAATGCTCATACACATATATACATATAAAGGACCGAACCCGTGTAAAAAATGTCTGGAAGGATG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGAGCAGATTGTTAACTTTGGGTAGGAGGCTCTTATTTCAATTTTTAATTTTAAATTATTAATATTTTGTTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TAAAATTTTGCTATGAGGGAGTACTGCTTTTGTAAATAAGGAGATATTTTAGGAAGTTAGTGTGAGATAAAAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TATGATTAATATTAAATATACACAAGCACCTAGCAAAACACACAGGAGAAAATAGCATTATGATGAATAGGAAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TATATTTTTATTCTTATTTGTATTTTCTAAATCTTCTACAACAAATAAATGTAGCTTTTATAGCTGGCAAGTAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACCACAGCTATCATTATAACATGCGTAACATATTGAGATGACCCTTCTGATCGTTTTTCCAGGCTCAGGGTGGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCAAAATTCAGGAAACATAGGATACACTTATTTTAAAACATTATATTTGTTATACCTCCAAATTCTGGGCTCAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TATGTTTTTCTTTAACTGCTAGACACTTTTTCAGGCGTAGTACCTCTACATTTGAAGCAATGGGTCCAATTGTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AACCTGAACAAAGTACAATAAATAATCACTATTTAACCCTTGTTTCCCGAATTTCTGGATACTCTGAAATGTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTGTTGCACTGGGAGTTGCAGAAAAACATATTGCAATAGTATTCAAAAATGTCTTGTGCTGTTTATCTAAACAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGTCCAAACATTTTGGAAAATAGTTTGGCAGTTTCTTAGGCAATTAAACATACACCTACCGTACAACACGATAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTGCCCTCCTAGGTATTTGCCCAAGAGAAGTGAAAGCATATGTTGCTACGCAGCTTGTACACAAAAGCTCACGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAGCACTGCTCGTTAACAGCCCCAAACTGGAAACCACCCTGATGTCCACTAATGGAGAAAGAGATGAATGGCGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TATATGTACATCTACATGTGTATCCGCATTTCTCTGCAATACAAAAGGAGCAAACCACTGCTAACACAGTGTGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACTCCCAGACCATGACTGTGAGGGAAGAAGGCGGAAACGAGTGTGCAGCGTGCAATTTCATTTTTATCGTATTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGGAAATGACAACGTTCTGAGCCACTACTGCTGGGTGTCTGCTCCTGGGGTACCTGCTGGCCCTGAATCACCCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCTGGATTCCTGGGACTCCAGGAACTTTGGGATCCAGAGAAGCGAGCTCTTCCATCCCAGGACCCATGACTGCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CACGCTGTTGAGCTTCTGAGGGCAGGGACCATGTTTTCTCTCTCAGAGCCAGGGCTGCATGTTGGAACTGGCCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGACAGTGTCAGTTAAACTTTCACGAAACAAATGTTCCTGAACTTGAAGCCATAGGACAGGACTCTGAAGATCA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAGAATCACACAGTGAGAAAATGATGCCCTTTTCAGCTCTGCACCAGTCCTTCTCATGACAGAAAGGAGAGTGT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTCGGGTTGGTTCGAGGATGTCTTTAACCCCTCTCATCGTTGCCCGTCTCGACACAGAACCAAGAACAGGCGGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TCCTAGACTCAGACTCTAGTGGACGAATGTGTCCAGCAAAAGTAACAGCATTACTTTATTTTACAATTATCTTC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AACGTATACCAAGTGATACTGGTTTTCCATTTATAATGGCAATGTAGCTTCCCTTGAGTTTGTTTTAAATTTTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 ATTCAATTTCAGACATACGGAAAAGTTGCGAGCATAGTAGAGTTCCTGGATGCCTTTCACCCAGATTCCCTTAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGTTAATATTTTCTCCCAATCTCTCTCTCTGTGTCTCCCCCTACCTTCCCCACCAAACTACCTACCTACCTACC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TACCTACACACACACACACACACACACACACACACACACACACTTTTTTTCTGAATTATTTAAAAGCATGCTGT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TCTTTCACTGCCAGTCCTGGTAATGTCCTTTATGGCAAAAGAAAACCCCAGGCCATGCCTTGCGTTCAGTTGGG 3848
Query 1 ----------------------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTGAT 45
||.||||.||..|| |||..||||||||||||||||.||||.||.|
Sbjct 3849 ATCCCTCTTTTTTTTTCCTTTTTTTGCCATAGAGTTTCATTCTTGTCACCCAGGCTGGAGTGCAATGGCGTGGT 3922
Query 46 CTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAG-AGTAGCTGGGACT 118
|||||||||||||||||||||||||||.|||||||||||||||.|||.||||||||||.| ||| |||||||.|
Sbjct 3923 CTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGTCTCAGCCTCCCGAAGT-GCTGGGATT 3995
Query 119 ATAGACATGCACCACCACGCCCGGCTAA--TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGG 190
|.||.||..||||||||||||||||||| ||||||||||||.||.||||.|||||||..|||||||.|.||||
Sbjct 3996 ACAGGCACCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGG 4069
Query 191 CTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA-------------- 249
|||||||||||||||||||||||.|||||||.|| .||||||||||||||||||.||.||
Sbjct 4070 CTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGC 4143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4144 CACCGCACCAGGCCTCTTTTACCTCTAAATGTGTCAGTACTCCAGTGTGTATTTCCTAAAAGCAAGACTATTTT 4217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4218 ATTACATAAGTATAGTACACTTTTCAAAATCAGGGAACTAACACTGATATAACCCTGTAGTCACTAGACCTCCT 4291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4292 TCCTGTTTCACTGCCTGTCCTTGTAATGTCCTTTATGGCAAAAGAAAACGTCAGGTCATGCCTTGCCTTCACTC 4365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4366 GGGATGCCTCTTTGACTCTTTTCATCTGAAACAGTTTTTGAGTCTTTGTATTCTATGACATTGGCATTTTTGAA 4439
Query 250 -------------------------------------------------------------------- 249
Sbjct 4440 AAGTACCTGCCAGATATTTTTTAAGATGTCTAAAAATTCCTTTTTAAATAAATTTAAGTTTTAAATAA 4507
