Nucleotide Global Alignment
Description
- Query:
- TRCN0000472308
- Subject:
- XR_001740231.1
- Aligned Length:
- 2571
- Identities:
- 1713
- Gaps:
- 835
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGAAGTGGAAGTAGAAGGCGGTGGCTGAGGCGGTTCCGGAGGTTCTAGTGTCGGAGTTGGGTGCAGGCAGGTGC 74
Query 1 --------------------------------------------ATGGCCGGCGCTCGGGCCGCCGCCGCCGCT 30
||||||||||||||||||||||||||||||
Sbjct 75 CATGGGCCCGCTTGAGGCACACTGAGGGGACGCGGGGCTGGGCCATGGCCGGCGCTCGGGCCGCCGCCGCCGCT 148
Query 31 GCCTCGGCGGGGTCCTCGGCCTCTTCAGGCAACCAGCCGCCTCAGGAGCTGGGGCTTGGGGAGCTGCTGGAGGA 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCCTCGGCGGGGTCCTCGGCCTCTTCAGGCAACCAGCCGCCTCAGGAGCTGGGGCTTGGGGAGCTGCTGGAGGA 222
Query 105 GTTCTCCCGGACTCAGTACCGGGCCAAGGATGGCAGCGGGACCGGCGGCTCTAAG------------------- 159
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTTCTCCCGGACTCAGTACCGGGCCAAGGATGGCAGCGGGACCGGCGGCTCTAAGTCGTCTTATCGCCAGACCT 296
Query 160 -------------------------------------------------------------------------- 159
Sbjct 297 GGAGGGCTTCCTGTCAGCTCAGGCCATCCCCACCCTAAGCACTGGCTGGCAGTGCGGTGGGAATCTTGCCGACC 370
Query 160 -------------------------------------------------------------------------- 159
Sbjct 371 CTGCCATCTCATTCCCCCACGTGGTTTTGGCAGCTTTAGCACCAAGTTTTCCAGTGGAATTCTGTTCCATCCTG 444
Query 160 -----------------------------------GTTGAGCGCATTGAGAAGAGATGTCTGGAGCTGTTTGGC 198
|||||||||||||||||||||||||||||||||||||||
Sbjct 445 CACCACAGAACTCTGATTTGACCTCAGAGATTACCGTTGAGCGCATTGAGAAGAGATGTCTGGAGCTGTTTGGC 518
Query 199 CGAGACTACTGTTTCAGCGTGATTCCAAACACGAATGGGGATATCTGTGGCCACTATCCCCGGCACATCGTGTT 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGAGACTACTGTTTCAGCGTGATTCCAAACACGAATGGGGATATCTGTGGCCACTATCCCCGGCACATCGTGTT 592
Query 273 CCTGGAGTATGAGAGTTCTGAGAAGGAGAAAGACACGTTTGAGAGTACCGTACAGGTGAGCAAGTTGCAAGACC 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTGGAGTATGAGAGTTCTGAGAAGGAGAAAGACACGTTTGAGAGTACCGTACAGGTGAGCAAGTTGCAAGACC 666
Query 347 TCATCCACCGCAGCAAGATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTTCAAGGGCAAGCAC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCATCCACCGCAGCAAGATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTTCAAGGGCAAGCAC 740
Query 421 ATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACTATTTTTTCTCAGG 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACTATTTTTTCTCAGG 814
Query 495 GGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGAAGTGGTGACACGC 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGAAGTGGTGACACGC 888
Query 569 ATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATACATCTGTGACCTG 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATACATCTGTGACCTG 962
Query 643 ATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACAAAGCCCAGCGCTA 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACAAAGCCCAGCGCTA 1036
Query 717 TGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAAGATCGGGATTACA 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAAGATCGGGATTACA 1110
Query 791 TGGCAGAAGGGCTCATATTTAACTGGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCCCGACTTCCTGACT 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGGCAGAAGGGCTCATATTTAACTGGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCCCGACTTCCTGACT 1184
Query 865 CACTCTCTGAACATTGACTGGAGCCAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAAACTACCTGAAGCT 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CACTCTCTGAACATTGACTGGAGCCAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAAACTACCTGAAGCT 1258
Query 939 GCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGATCGGACCC 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGATCGGACCC 1332
Query 1013 CCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCTGAAGCCCACTGAG 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCTGAAGCCCACTGAG 1406
Query 1087 ATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGCTCAGCAAAGGGGA 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGCTCAGCAAAGGGGA 1480
Query 1161 GGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCTCTGAAGACCCAGA 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCTCTGAAGACCCAGA 1554
Query 1235 GGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAGACGAAAGGACCGT 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAGACGAAAGGACCGT 1628
Query 1309 GGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCACTGGGAGCTTCAC 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCACTGGGAGCTTCAC 1702
Query 1383 CTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTG----GAGGAAGAGCCACT----- 1447
||||||||||||||||||||||||||||||||||||||||||||||||||| |.|||..|.||.||
Sbjct 1703 CTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTGATCAGTGGACCATCCCCTGCCCG 1776
Query 1448 CATC----CTCTCCACAGAGTGTCCTCTGGAACCGGCCA-----CAACCCTCAGAGGACCGCT-TGCC----TT 1507
.||| ||||||||||| ||.|||.|.|.|.|| .||| || ||| ||.| ||
Sbjct 1777 GATCCTCTCTCTCCACAGA-----CTATGGCAGCTGGCAGATGGTAAC-------GG---GCTGTGGCAGTATT 1835
Query 1508 CCCAGCAG-GGGCTGGCGGAAGCCAGGTCTTC---CAG-CTCCTCTTCCTCAAACCATTCTGATAACTTTTTCA 1576
|||.|| ||||||.| ||.| ||| ||||||| ||| ||.|||.| .||.|.
Sbjct 1836 --CAGGAGCGGGCTGTC-----------CTGCACACAGACTCCTCT--CTC---CCTTTCAG------CTTCCC 1885
Query 1577 GGATGGGTAGCAGTCCCCTGGAGGTCCCCAAACCCAG------GCTTGCAGCCCTGAGTGATCGAGAGACTCGG 1644
|||| |||.||||.|| ||| |||||||||||||||||||||||||||||||
Sbjct 1886 GGAT----------------GAGCTCCCTAA---CAGTTGTCTGCTTGCAGCCCTGAGTGATCGAGAGACTCGG 1940
Query 1645 CTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACAGTGGGGCTTCGGGCAGTAGCCCCCAGTCC 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1941 CTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACAGTGGGGCTTCGGGCAGTAGCCCCCAGTCC 2014
Query 1719 TTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGTTGGACTCCGGAGCATCAGCAGCAATGCCT 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2015 TTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGTTGGACTCCGGAGCATCAGCAGCAATGCCT 2088
Query 1793 TG------------------------------------------------------------------------ 1794
||
Sbjct 2089 TGTGAAGAAGCCAGCCCATGACATTTTCCTGCTCCTCTCTCAGCTGAGCCCTTAGCAGAGAATCAAAGCCATGC 2162
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2163 CTGGCCGAAGGGGTACTTCCAGGTCAGGGGAAATTTCAGTCCCCCATCTCCATCATGAACATGGCAGCCCCAAA 2236
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2237 GCTGAGCAAGGCCAAAGACAGGGTTTTCCAACCCCCAGCCTCTTGACTGGTGACCACCACCCCTTCTTGTCACT 2310
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2311 GTCTCCCACCCACCCCATCTTTGCTGGGATTCCCATCAACTCTCAGAACTGTGTGGGGTTTCCCTGGGGCCTTG 2384
Query 1795 -------------------------------------------------------------------------- 1794
Sbjct 2385 TGGAAGCCATGACTTCACAAAGACCCTACCTGTCAGTTCTTGTTTCTGGGGAGGAGGGATCACCTGCACTGAGA 2458
Query 1795 ------------------------------------------------------- 1794
Sbjct 2459 ATGAGGCAGTTTGACACAGATCACAAAATAAAATCAAAGTCTTTTTGAATAGCCA 2513
