Nucleotide Global Alignment
Description
- Query:
- TRCN0000472416
- Subject:
- XM_006519504.3
- Aligned Length:
- 2200
- Identities:
- 1813
- Gaps:
- 56
Alignment
Query 1 ATGGAGGGCTCACGTCCCCGCGCCCCGAGCGGCCACTTAGCGCCGTCGCCGCCGGCTTTCGACGGCGAGCTGGA 74
|||||||||||||||||||||..||.|..|||||||.|||.|||.||.||.||.||.|||||||||||||||||
Sbjct 1 ATGGAGGGCTCACGTCCCCGCATCCTGGTCGGCCACCTAGAGCCTTCCCCACCAGCCTTCGACGGCGAGCTGGA 74
Query 75 TCTGCAGCGATACTCCAACGGGCCAGCCGTGAGCG------------CAGGGTCGCTCGGGATGGGAGCGGTGA 136
|||||||||.|||||||||||.||||..||.||.| |.||.||||..|||||||||||.|||.
Sbjct 75 TCTGCAGCGCTACTCCAACGGACCAGGTGTCAGTGGGACTCCAGGACCCGGCTCGCCTGGGATGGGAGCAGTGG 148
Query 137 GCTGGTCTGAGAGTCGTGCAGGCGAACGGCGCTTCCCCTGCCCTGTATGCGGGAAGCGCTTCCGCTTCAACTCT 210
|.||||||||||.||||||||||||||||||||||||.||.|||||.|||||.|||||||||||.|||||.||.
Sbjct 149 GTTGGTCTGAGACTCGTGCAGGCGAACGGCGCTTCCCTTGTCCTGTGTGCGGAAAGCGCTTCCGATTCAATTCC 222
Query 211 ATCCTTGCTTTGCACCTGCGGGCGCACCCAGGAGCCCAGGCCTTCCAGTGCCCTCACTGCGGCCACCGCGCGGC 284
|||.|.||||||||||||.|.||.|||||.||.|||||.||||||||||||||.||.||||||||||||||.||
Sbjct 223 ATCTTGGCTTTGCACCTGAGAGCCCACCCGGGCGCCCAAGCCTTCCAGTGCCCACATTGCGGCCACCGCGCAGC 296
Query 285 GCAGCGGGCTCTGCTGCGCTCGCACCTGCGCACACACCAGCCCGAGCGCCCACGTAGTCCTGCTGCACGCCTGT 358
|||||||||||||||||||||.|||||.||.||.||||||||.|||||.|||||.||.|||||||||||.||||
Sbjct 297 GCAGCGGGCTCTGCTGCGCTCACACCTCCGAACGCACCAGCCGGAGCGTCCACGCAGCCCTGCTGCACGGCTGT 370
Query 359 TGCTGGAGTTGGAAGAGCGCGCGCTACTACGCGAGGCCCGACTGGGGAGAGCCCGAAGCTCAGGGGGCATGCAG 432
|||||||||||||.||.|||||.||.||.|||||.||||||||.|||||||||.||||||||||.|||||||||
Sbjct 371 TGCTGGAGTTGGAGGAACGCGCCCTGCTTCGCGAAGCCCGACTCGGGAGAGCCAGAAGCTCAGGCGGCATGCAG 444
Query 433 GCCACCCCTGCCACTGAGGGTCTGGCGCGGCCCCAGGCTCCTTCATCGTCCGCCTTCCGTTGCCCCTACTGCAA 506
.|||.|||||||.|.|||||.|||||.||.||.||||..|||||.||.||.||||||||||||||.|.||||||
Sbjct 445 TCCAGCCCTGCCGCAGAGGGCCTGGCTCGCCCTCAGGTCCCTTCCTCATCTGCCTTCCGTTGCCCTTTCTGCAA 518
Query 507 AGGCAAGTTTCGCACCTCGGCGGAGCGCGAACGCCACCTGCACATCCTGCATAGGCCCTGGAAGTGCGGCCTGT 580
||||||||||||||||||.||||||||.||||||||||||||.||||||||.|||||||||||||||.||.|||
Sbjct 519 AGGCAAGTTTCGCACCTCAGCGGAGCGGGAACGCCACCTGCATATCCTGCACAGGCCCTGGAAGTGCAGCTTGT 592
Query 581 GCAGTTTCGGCTCCAGCCAGGAGGAGGAGCTGCTGCACCACAGCCTGACGGCCCACGGGGCTCCCGAGCGTCCC 654
|||||||.|||||||||||||||||||||.|||||||||||||.||||||||||||||||||.|||||||.|||
Sbjct 593 GCAGTTTTGGCTCCAGCCAGGAGGAGGAGTTGCTGCACCACAGTCTGACGGCCCACGGGGCTTCCGAGCGCCCC 666
Query 655 CTGGCGGCCACCTCCGCTGCGCCTCCGCCTCAGCCTCAGCCTCAGCCTCCACCCCAGCCCGAACCCAGATCAGT 728
||||||||.||.| ||..||||.|.||.|.||||||||||||||..|||||||||||.|
Sbjct 667 CTGGCGGCTACAT---------------CTACGCCTGAACCCCCGCCTCCACCCCAGCAAGAACCCAGATCTG- 724
Query 729 CCC-----CC--AGCCGGAGCCGGA------GCCGGAGCCCGAACGTGAGGCAACCCCGACCACAGCTCCTGCC 789
||| || ||||.|||||.|| |||.|||||.||.||.|||||||.|||..||.||.|||||||.
Sbjct 725 CCCTTGAGCCTGAGCCTGAGCCTGAACCTAGGCCAGAGCCTGACCGGGAGGCAAACCCTGCCCCAACTCCTGCA 798
Query 790 GCTCCCGAGGAGCCCCCAGCGCCTCCGGAGTTCCGCTGCCAAGTGTGCGGCCAGAGCTTTACACAGTCTTGGTT 863
.||||.|||||||||||.|||||.||.||.|||||.|||||.||||||||||||||||||||||||||.|||||
Sbjct 799 CCTCCGGAGGAGCCCCCTGCGCCACCTGAATTCCGTTGCCAGGTGTGCGGCCAGAGCTTTACACAGTCCTGGTT 872
Query 864 TCTCAAGGGCCACATGCGTAAGCACAAGGCCTCCTTCGATCATGCGTGTCCGGTGTGCGGCCGCTGCTTCAAGG 937
|||||||||.||||||||.|||||||||||||||||.|||||||||||.||.||.||.||.|||||||||||||
Sbjct 873 TCTCAAGGGTCACATGCGCAAGCACAAGGCCTCCTTTGATCATGCGTGCCCCGTATGTGGTCGCTGCTTCAAGG 946
Query 938 AGCCCTGGTTCCTTAAGAACCACATGAAGGTGCACGCCAGCAAGCTGGGCCCACTGCGTGCCCCGGGGCCTGCC 1011
|||||||||||||||||||||||||||||||||||.|||||||||||||.||..|||||||.||.||.||||.|
Sbjct 947 AGCCCTGGTTCCTTAAGAACCACATGAAGGTGCACACCAGCAAGCTGGGTCCTTTGCGTGCTCCAGGCCCTGGC 1020
Query 1012 TCCGGGCCTGCCCGCGCCCCCCAGCCTCCTGACCTCGGCCTGCTGGCCTATGAGCCGTTGGGCCCAGCGCTCCT 1085
||.|..||||||.|.|||||.||||||||.|||||..||||.|||||.||||||||..|||||||.||.|||||
Sbjct 1021 TCTGCACCTGCCAGGGCCCCTCAGCCTCCCGACCTGAGCCTACTGGCATATGAGCCACTGGGCCCTGCACTCCT 1094
Query 1086 CTTGGCCCCGGCTCCCACCCCGGCCGAGCGCCGTGAGCCCCCGAGCCTCTTGGGCTACCTGAGCCTGCGAGCTG 1159
|.|||||||.||.|||.|.|||||.||||||||.||||||||.||||||||.|||||||||||..|.|||||||
Sbjct 1095 CCTGGCCCCAGCACCCGCTCCGGCTGAGCGCCGAGAGCCCCCAAGCCTCTTAGGCTACCTGAGTGTACGAGCTG 1168
Query 1160 GCGAGGGCCGGCCCAACGGCGAGGGTGCTGAGCCC----GGTCCCGGCCGCAGCTTCGGAGGCTTCCGCCCGCT 1229
|.||.|..||.|||||.||.||||||||||| ||| ||| |||||.||||..|||||.||||||||.||
Sbjct 1169 GGGAAGTACGACCCAATGGTGAGGGTGCTGA-CCCTGGAGGT---GGCCGAAGCTATGGAGGGTTCCGCCCACT 1238
Query 1230 GTCCTCTGCTCTCCCGGCCCGGGCTCGCCGGCACCGTGCGGAGGAGCCTGAGGAAGAAGAGGAGGTGGTGGAGG 1303
|.|.||.|||||.||...|||||||||.||.||||||.|.|||||.||.||.||.|||||.||.||||||||||
Sbjct 1239 GCCTTCAGCTCTTCCCAACCGGGCTCGGCGACACCGTACAGAGGAACCAGAAGAGGAAGAAGAAGTGGTGGAGG 1312
Query 1304 CCGAGGAGGAAACCTGGGCCCGGGGCAGGTCGCTGGGCTCTCTGGCTTCCCTGCACCCGCGCCCGGGTGAGGGA 1377
|.||.|||||.|.|||||||||.|||||||||||||||||||||.|||||||||||||...|||.||||||||.
Sbjct 1313 CTGAAGAGGAGAGCTGGGCCCGAGGCAGGTCGCTGGGCTCTCTGACTTCCCTGCACCCCAACCCAGGTGAGGGG 1386
Query 1378 CCGGGGCACTCTGCCTCTGCTGCTGGGGCCCAGGCAAGATCGACCGCCACGCAGGAAGAGAATGGGCTGTTGGT 1451
.|.||.||..||||..||||.||.|||.|||||||.|||||.||.|||||.||.|||||.||.||||||.||||
Sbjct 1387 TCAGGACAGCCTGCACCTGCCGCGGGGACCCAGGCGAGATCCACGGCCACCCAAGAAGAAAACGGGCTGCTGGT 1460
Query 1452 TGGAGGGACCCGGCCTGAAGGGGGCCGGGGCGCCACCGGCAAGGATTGTCCTTTCTGCGGAAAATCTTTCCGCT 1525
|||||||||.||..||||||.||||||.||.|||||.||||||||.||.||.|||||.||||||||||||||||
Sbjct 1461 TGGAGGGACACGATCTGAAGCGGGCCGTGGGGCCACTGGCAAGGACTGCCCCTTCTGTGGAAAATCTTTCCGCT 1534
Query 1526 CAGCACATCACCTCAAAGTGCATCTGCGAGTGCACACAGGCGAGCGGCCCTACAAGTGTCCGCACTGCGACTAC 1599
|.||.||||||.|.|||||||||||.||.|||||||||||.|||||.||||||||||||||.|||||||||||.
Sbjct 1535 CGGCGCATCACTTAAAAGTGCATCTCCGTGTGCACACAGGTGAGCGTCCCTACAAGTGTCCACACTGCGACTAT 1608
Query 1600 GCGGGCACCCAGTCCGGCTCGCTCAAGTATCACCTACAGCGCCACCACCGGGAGCAGAGGAGCGGGGCCGGCCC 1673
||.||.||||||||.||||||||||||||||||||.|||||.||||||||.||||||||||||.|.||.||.||
Sbjct 1609 GCAGGTACCCAGTCGGGCTCGCTCAAGTATCACCTTCAGCGTCACCACCGAGAGCAGAGGAGCAGTGCGGGTCC 1682
Query 1674 CGGGCCACCCCCGGAGCCACCGCCTCCTTCCCAGCGGGGTTC---GGCCCCGCAATCTGGAGCCAAGCCGTCTC 1744
.|||||.|||||.||.||.|||||.||||||||||||||.|| |...|||||.||.|||||||||||..|||
Sbjct 1683 TGGGCCTCCCCCAGAACCCCCGCCACCTTCCCAGCGGGGCTCACTGCAGCCGCAGTCAGGAGCCAAGCCAACTC 1756
Query 1745 CGCAGCCT--GCGACCTGGGTGGAGGGCGCCTCAAGTCCCCGGCCTCCTTCTAGCGGTGCTGGGCCGGGGTCCC 1816
.| |||| ||.||||||||.||||||.|..|||||.|||||||||||||.|||.|..|.||.||.|||||||
Sbjct 1757 AG--GCCTCAGCCACCTGGGTAGAGGGCACTGCAAGTACCCGGCCTCCTTCGAGCAGCACCGGACCAGGGTCCC 1828
Query 1817 GTCGGAAGCCCGCCAGCCCTGGGAGGACCCTGCGCAACGGGCGAGGCGGTGAGGCCGAACCCCTGGACCTGTCC 1890
||.|||||||.||.||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||
Sbjct 1829 GTAGGAAGCCTGCTAGCCCTGGGAGGACCCTGCGAAACGGGCGAGGTGGTGAAGCCGAACCCCTGGACCTGTCC 1902
Query 1891 TTGCGGGCAGGGCCGGGAGGCGAGGCCGGGCCTGGGGGTGCCCTCCACCGCTGCCTCTTCTGCCCGTTCGCCAC 1964
.|.|||||.||.||||||||.|||||||||.|.|||||||||||.||||||||||||||||||||.||.|||||
Sbjct 1903 CTACGGGCGGGCCCGGGAGGTGAGGCCGGGGCAGGGGGTGCCCTTCACCGCTGCCTCTTCTGCCCCTTTGCCAC 1976
Query 1965 TGGAGCCCCAGAGCTCATGGCCTTGCACCTTCAAGTGCACCACAGCCGCCGGGCTAGGGGCCGCCGGCCACCCC 2038
||||||.||.|||||||||||||||||.||.|||||.|||||.|||||.||.|||.||||||||||||..||||
Sbjct 1977 TGGAGCTCCTGAGCTCATGGCCTTGCATCTGCAAGTACACCATAGCCGTCGTGCTCGGGGCCGCCGGCAGCCCC 2050
Query 2039 AGGCTGACGCGTCCCCGCCCTATGCCCGAGTACCATCAGGAGAGACCCCTCCCAGTCCTTCGCAGGAAGGGGAG 2112
..||.|||.||||.||..||||||.|||.|.||||||||||||||||||||||||||||.|.|..||||.||||
Sbjct 2051 GAGCCGACACGTCTCCAACCTATGTCCGGGCACCATCAGGAGAGACCCCTCCCAGTCCTCCACTAGAAGAGGAG 2124
Query 2113 GAGGGCTCCGGGCTGTCCAGACCCGGAGAGGCAGGGCTGGGGGGGCAAGAACGG 2166
|...||.|.||||||||.|||.|||||||||||||.||.|||||||||||||||
Sbjct 2125 GGCAGCCCAGGGCTGTCTAGATCCGGAGAGGCAGGTCTTGGGGGGCAAGAACGG 2178