Construct: ORF TRCN0000472416

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003602.1_s317c1
Derived from:
ccsbBroadEn_08255
DNA Barcode:
ACTACCACGATGTTCCTCGAGGGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF219 (51222)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472416
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51222 ZNF219 zinc finger protein 219 NM_001101672.2 99.9% 99.8% 778C>A
2 human 51222 ZNF219 zinc finger protein 219 NM_001102454.1 99.9% 99.8% 778C>A
3 human 51222 ZNF219 zinc finger protein 219 NM_016423.3 99.9% 99.8% 778C>A
4 human 51222 ZNF219 zinc finger protein 219 XM_017021354.1 99.9% 99.8% 778C>A
5 human 51222 ZNF219 zinc finger protein 219 XM_011536825.1 95% 94.7% 1_97del;102_115del;889C>A
6 human 51222 ZNF219 zinc finger protein 219 XM_024449623.1 94.2% 94.1% 0_1ins123;655C>A
7 human 51222 ZNF219 zinc finger protein 219 XM_024449624.1 94.2% 94.1% 0_1ins123;655C>A
8 human 51222 ZNF219 zinc finger protein 219 XM_024449625.1 94.2% 94.1% 0_1ins123;655C>A
9 human 51222 ZNF219 zinc finger protein 219 XM_005267739.1 93.9% 93.6% 1_124del;129_142del;916C>A
10 mouse 69890 Zfp219 zinc finger protein 219 NM_001253694.1 82.4% 87.5% (many diffs)
11 mouse 69890 Zfp219 zinc finger protein 219 NM_001253695.1 82.4% 87.5% (many diffs)
12 mouse 69890 Zfp219 zinc finger protein 219 NM_027248.2 82.4% 87.5% (many diffs)
13 mouse 69890 Zfp219 zinc finger protein 219 XM_006519498.3 82.4% 87.5% (many diffs)
14 mouse 69890 Zfp219 zinc finger protein 219 XM_006519499.3 82.4% 87.5% (many diffs)
15 mouse 69890 Zfp219 zinc finger protein 219 XM_006519501.3 82.4% 87.5% (many diffs)
16 mouse 69890 Zfp219 zinc finger protein 219 XM_006519502.3 82.4% 87.5% (many diffs)
17 mouse 69890 Zfp219 zinc finger protein 219 XM_006519503.2 82.4% 87.5% (many diffs)
18 mouse 69890 Zfp219 zinc finger protein 219 XM_006519504.3 82.4% 87.5% (many diffs)
19 mouse 69890 Zfp219 zinc finger protein 219 XM_006519505.1 82.4% 87.5% (many diffs)
20 mouse 69890 Zfp219 zinc finger protein 219 XM_011245176.2 82.4% 87.5% (many diffs)
21 mouse 69890 Zfp219 zinc finger protein 219 XM_011245177.1 82.4% 87.5% (many diffs)
22 mouse 69890 Zfp219 zinc finger protein 219 XM_017316180.1 82.4% 87.5% (many diffs)
23 mouse 69890 Zfp219 zinc finger protein 219 NM_001253696.1 78.2% 83.3% (many diffs)
24 mouse 69890 Zfp219 zinc finger protein 219 XM_006519506.3 78.2% 83.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2232
ORF length:
2166
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga gggctcacgt ccccgcgccc cgagcggcca cttagcgccg tcgccgccgg
121ctttcgacgg cgagctggat ctgcagcgat actccaacgg gccagccgtg agcgcagggt
181cgctcgggat gggagcggtg agctggtctg agagtcgtgc aggcgaacgg cgcttcccct
241gccctgtatg cgggaagcgc ttccgcttca actctatcct tgctttgcac ctgcgggcgc
301acccaggagc ccaggccttc cagtgccctc actgcggcca ccgcgcggcg cagcgggctc
361tgctgcgctc gcacctgcgc acacaccagc ccgagcgccc acgtagtcct gctgcacgcc
421tgttgctgga gttggaagag cgcgcgctac tacgcgaggc ccgactgggg agagcccgaa
481gctcaggggg catgcaggcc acccctgcca ctgagggtct ggcgcggccc caggctcctt
541catcgtccgc cttccgttgc ccctactgca aaggcaagtt tcgcacctcg gcggagcgcg
601aacgccacct gcacatcctg cataggccct ggaagtgcgg cctgtgcagt ttcggctcca
661gccaggagga ggagctgctg caccacagcc tgacggccca cggggctccc gagcgtcccc
721tggcggccac ctccgctgcg cctccgcctc agcctcagcc tcagcctcca ccccagcccg
781aacccagatc agtcccccag ccggagccgg agccggagcc cgaacgtgag gcaaccccga
841ccacagctcc tgccgctccc gaggagcccc cagcgcctcc ggagttccgc tgccaagtgt
901gcggccagag ctttacacag tcttggtttc tcaagggcca catgcgtaag cacaaggcct
961ccttcgatca tgcgtgtccg gtgtgcggcc gctgcttcaa ggagccctgg ttccttaaga
1021accacatgaa ggtgcacgcc agcaagctgg gcccactgcg tgccccgggg cctgcctccg
1081ggcctgcccg cgccccccag cctcctgacc tcggcctgct ggcctatgag ccgttgggcc
1141cagcgctcct cttggccccg gctcccaccc cggccgagcg ccgtgagccc ccgagcctct
1201tgggctacct gagcctgcga gctggcgagg gccggcccaa cggcgagggt gctgagcccg
1261gtcccggccg cagcttcgga ggcttccgcc cgctgtcctc tgctctcccg gcccgggctc
1321gccggcaccg tgcggaggag cctgaggaag aagaggaggt ggtggaggcc gaggaggaaa
1381cctgggcccg gggcaggtcg ctgggctctc tggcttccct gcacccgcgc ccgggtgagg
1441gaccggggca ctctgcctct gctgctgggg cccaggcaag atcgaccgcc acgcaggaag
1501agaatgggct gttggttgga gggacccggc ctgaaggggg ccggggcgcc accggcaagg
1561attgtccttt ctgcggaaaa tctttccgct cagcacatca cctcaaagtg catctgcgag
1621tgcacacagg cgagcggccc tacaagtgtc cgcactgcga ctacgcgggc acccagtccg
1681gctcgctcaa gtatcaccta cagcgccacc accgggagca gaggagcggg gccggccccg
1741ggccaccccc ggagccaccg cctccttccc agcggggttc ggccccgcaa tctggagcca
1801agccgtctcc gcagcctgcg acctgggtgg agggcgcctc aagtccccgg cctccttcta
1861gcggtgctgg gccggggtcc cgtcggaagc ccgccagccc tgggaggacc cTGCGCAACG
1921GGCGAGGCGG TGAGGCCGAA CCCCTGGACC TGTCCTTGCG GGCAGGGCCG GGAGGCGAGG
1981CCGGGCCTGG GGGTGCCCTC CACCGCTGCC TCTTCTGCCC GTTCGCCACT GGAGCCCCAG
2041AGCTCATGGC CTTGCACCTT CAAGTGCACC ACAGCCGCCG GGCTAGGGGC CGCCGGCCAC
2101CCCAGGCTGA CGCGTCCCCG CCCTATGCCC GAGTACCATC AGGAGAGACC CCTCCCAGTC
2161CTTCGCAGGA AGGGGAGGAG GGCTCCGGGC TGTCCAGACC CGGAGAGGCA GGGCTGGGGG
2221GGCAAGAACG GTACCCAACT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA
2281ACCCTCTCCT CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT
2341CGATTTCTTG GCTTTATATA TCTTGTGGAA AGGACGAACT ACCACGATGT TCCTCGAGGG
2401TACGCGTTAA GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)