Nucleotide Global Alignment

Description

Query:
TRCN0000472464
Subject:
XM_006501056.1
Aligned Length:
1292
Identities:
1039
Gaps:
124

Alignment

Query    1  ATGCAAGTCTCCATAGCCTGCACAG----AGCA------CA-ATTT--GAAGA----------GTCGGAATG--  49
            ||||..|      .||||.||||||    .|||      || ||.|  |||||          .||.|||.|  
Sbjct    1  ATGCTGG------CAGCCCGCACAGGCGCTGCAGGGAGTCAGATCTCCGAAGACAACAGCAAGTTCAGAAAGCA  68

Query   50  GTGAGGACCGACTTC---TGAGCAAG-CAGAGCTCC----ACCGCCCCC---AATGTGGTAAAC-GCAGC----  107
            ||..||.|...||||   .|.|.||| ||||.||||    |..||||||   ||||....|.|| |||||    
Sbjct   69  GTCTGGCCTTTCTTCAGGGGGGAAAGACAGATCTCCCAAGAAAGCCCCCGAGAATGCCAAAGACAGCAGCCTCA  142

Query  108  ------CCGGGCCAAATTCCGCACGGTCGCTATCATCGCGC---GCAG-----CCTG----GGGACGT------  157
                  ||||| ||||..|.||          |||  |.||   ||||     ||||    ||||.||      
Sbjct  143  GCCCAACCGGG-CAAAGCCAGC----------TCA--GGGCAAGGCAGCTGGCCCTGCTGCGGGAGGTGGAGAT  203

Query  158  -----------TCACGC-CT----------CAGC-ATCACATTTCTCTCAAAGAGTCCACCGCAAAGCA-GACT  207
                       |.|.|| ||          |||| |.||||               ||||.|||.| || .||.
Sbjct  204  GAACTGGTACCTAAAGCTCTGCGAGCTGTCCAGCGAGCACA---------------CCACGGCACA-CACCACC  261

Query  208  GGCATGAAATATAGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGGGTGACATT  281
            ||.|||....|.|||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  262  GGGATGCCGCACAGGAATCTTGGGAAATCAGGACTCAGAGTTTCATGCTTGGGTCTTGGAACATGGGTGACATT  335

Query  282  TGGAGGTCAAATTTCAGATGAGGTTGCTGAACGGCTGATGACCATCGCCTATGAAAGTGGTGTTAACCTCTTTG  355
            ||||||||||||.|||||||||||||||||||||||||||||.||.|||||.||||||||.|||||.|||||.|
Sbjct  336  TGGAGGTCAAATCTCAGATGAGGTTGCTGAACGGCTGATGACAATTGCCTACGAAAGTGGAGTTAATCTCTTCG  409

Query  356  ATACTGCCGAAGTCTATGCTGCTGGAAAGGCTGAAGTGATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAGG  429
            |.||.||.||.||||||||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||
Sbjct  410  ACACAGCTGAGGTCTATGCTGCTGGGAAGGCTGAGGTGATTCTGGGAAGCATCATCAAGAAGAAAGGCTGGAGG  483

Query  430  AGGTCCAGTCTGGTCATAACAACCAAACTCTACTGGGGTGGAAAAGCTGAAACAGAAAGAGGGCTGTCAAGAAA  503
            ||||||||..|||||||.||||||||||||||||||||||||||||||||.||||||||.||.|||||||||||
Sbjct  484  AGGTCCAGCTTGGTCATCACAACCAAACTCTACTGGGGTGGAAAAGCTGAGACAGAAAGGGGACTGTCAAGAAA  557

Query  504  GCATATTATTGAAGGATTGAAGGGCTCCCTCCAGAGGCTGCAGCTCGAGTATGTGGATGTGGTCTTTGCAAATC  577
            |||.||.|||||||||.||||.||||||||||||||||||||.||.||.||.||||||||||||||||||||||
Sbjct  558  GCACATCATTGAAGGACTGAAAGGCTCCCTCCAGAGGCTGCAACTGGAATACGTGGATGTGGTCTTTGCAAATC  631

Query  578  GACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGAGCCATGACACATGTGATAAACCAAGGCATGGCGATG  651
            |.||.|||||.||||||||||||||||||||.||.|||||||||||.||.|||||.||||||||||||||.|||
Sbjct  632  GCCCAGACAGCAACACTCCCATGGAAGAAATCGTTCGAGCCATGACGCACGTGATCAACCAAGGCATGGCCATG  705

Query  652  TACTGGGGCACCTCGAGATGGAGTGCTATGGAGATCATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATGAT  725
            |||||||||||||||||.|||||.||.||||||||||||||||||||.|||||.|||.|.||||||||.|||||
Sbjct  706  TACTGGGGCACCTCGAGGTGGAGCGCGATGGAGATCATGGAAGCCTACTCTGTCGCACGGCAGTTCAACATGAT  779

Query  726  CCCACCGGTCTGTGAACAAGCTGAGTACCATCTTTTCCAGAGAGAGAAAGTGGAGGTCCAGCTGCCAGAGCTCT  799
            |||.||.||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||
Sbjct  780  CCCGCCTGTCTGTGAGCAAGCTGAGTACCATCTTTTCCAGAGAGAGAAGGTGGAGGTCCAGCTGCCGGAGCTCT  853

Query  800  ACCACAAAATAGGTGTTGGCGCAATGACATGGTCTCCACTTGCCTGTGGAATCATCTCAGGAAAATACGGAAAC  873
            ||||.||||||||.|||||.|||||||||||||||||||||||.||||||||.||.|||||||||||.|||||.
Sbjct  854  ACCATAAAATAGGAGTTGGTGCAATGACATGGTCTCCACTTGCTTGTGGAATTATTTCAGGAAAATATGGAAAT  927

Query  874  GGGGTGCCTGAAAGTTCCAGGGCTTCACTGAAGTGCTACCAGTGGTTGAAAGAAAGAATTGTAAGTGAAGAAGG  947
            ||||||||.||||||||.||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||
Sbjct  928  GGGGTGCCAGAAAGTTCTAGAGCTTCACTGAAGTGCTACCAGTGGTTGAAGGAAAGAATCGTAAGTGAAGAAGG  1001

Query  948  GAGAAAACAGCAAAACAAGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAG  1021
            |||||||||||||||||||||.||||||||.||.|||||.||.|||||.|||||.|||||.|||||||||||.|
Sbjct 1002  GAGAAAACAGCAAAACAAGCTGAAAGACCTCTCTCCAATCGCTGAGCGCCTGGGGTGCACGCTACCTCAGCTGG  1075

Query 1022  CTGTTGCGTGGTGCCTGAGAAACGAAGGTGTGAGTTCTGTGCTCCTGGGATCATCCACTCCTGAACAACTCATT  1095
            ||||.|||||||||||||||||.||.|||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1076  CTGTGGCGTGGTGCCTGAGAAATGAGGGTGTGAGTTCTGTGCTCCTGGGATCATCCACTCCGGAACAACTCATT  1149

Query 1096  GAAAACCTTGGTGCCATTCAGGTTCTCCCAAAGATGACATCACATGTGGTAAATGAGATTGATAACATACTGCG  1169
            |||||||||||||||||||||||.|||||.|||||||||||.||.|||||.||.||||||||||||||||||||
Sbjct 1150  GAAAACCTTGGTGCCATTCAGGTCCTCCCTAAGATGACATCTCACGTGGTGAACGAGATTGATAACATACTGCG  1223

Query 1170  CAACAAGCCCTACAGCAAGAAGGACTATAGATCA  1203
            ||||||||||||||||||.|||||||||||||||
Sbjct 1224  CAACAAGCCCTACAGCAAAAAGGACTATAGATCA  1257

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