Nucleotide Global Alignment

Description

• Query: TRCN0000472482
• Subject: XM_011245029.2
• Aligned Length: 1330
• Identities: 859
• Gaps: 407

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTCAGCTCCTTTCCAGTGGTTTTGCTGGAAACCATGTCTCACTACACAGATGAACCCAGATTTACCATAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACAGATAGACCTGCTCCAGCGTCTTCGGCGTACCGGGATGACCAAACATGAAATCCTTCATGCATTAGAAACTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGACCGTCTTGATCAAGAGCATAGTGATAAATTTGGAAGGAGGTCCAGCTACGGGGGAAGCTCATATGGGAAC  222

Query    1  ------------------------------------------------------------------ATGTCCCC  8
                                                                              ||||||||
Sbjct  223  AGTACCAACAACGTTCCAGCATCTTCCTCTACAGCCACAGCTTCCACGCAGACCCAGCACTCGGGAATGTCCCC  296

Query    9  GTCACCTAGCAACAGTTATGATACTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGC  82
            .|||||.|||||||||||.|||||.|||||||.|||||||||||||||||||||||||||||||||.|||||.|
Sbjct  297  ATCACCCAGCAACAGTTACGATACCTCCCCACTGCCTTGCACTACCAATCAAAATGGGAGGGAGAACAATGATC  370

Query   83  GATTATCTACATCCAATGGAAAGATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGT  156
            ||||.||.|||||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||.||.
Sbjct  371  GATTGTCCACATCCAATGGGAAGATGTCACCATCTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATATAGC  444

Query  157  TTTGAAGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGAT  230
            |||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  445  TTTGAGGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAGGAATTAATGAGGAGGGACAGCAGTGTGAT  518

Query  231  AAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCA  304
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  519  AAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGAATCA  592

Query  305  GTCAGAGCCGGATCTCTCATTGGCTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTAC  378
            |||||||.||.||||||||.||||||.||||||||||||||||.||||||||.|||||||||||.||.||.|||
Sbjct  593  GTCAGAGTCGAATCTCTCACTGGCTGCTGCAGCAGGGATCAGATCTGAGTGAGCAGAAGAAAAGGGCGTTCTAC  666

Query  379  CGATGGTATCAACTTGAGAAGACAAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGA  452
            ||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||
Sbjct  667  CGATGGTATCAACTTGAGAAGACAAACCCTGGGGCTACGCTAAGTATGAGACCTGCCCCCATTCCAATAGAGGA  740

Query  453  CCCTGAATGGAGACAAACGCCTCCCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGAT  526
            ||||||||||||||||||.||||||||||||||.||||||.||||.||.|||||.||.||||||||||||.|||
Sbjct  741  CCCTGAATGGAGACAAACACCTCCCCCAGTCTCCGCCACACCTGGAACCTTCCGGCTTCGACGAGGGAGTAGAT  814

Query  527  TTACCTGGAGAAAGGAGTGCCTGGCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAG  600
            ||||||||||||||||||||||.|||||.|||||||||||||||||||||||.||.||||||||||||||||||
Sbjct  815  TTACCTGGAGAAAGGAGTGCCTAGCTGTCATGGAAAGTTACTTCAATGAGAACCAGTACCCAGATGAAGCAAAG  888

Query  601  AGGGAAGAAATTGCAAACGCTTGCAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGT  674
            ||.|||||||||||.||.||||||||||||||.||||||||||||||||||||||||||.||.||||||.||||
Sbjct  889  AGAGAAGAAATTGCCAATGCTTGCAATGCAGTCATACAGAAGCCAGGCAAAAAGCTGTCTGACCTGGAACGAGT  962

Query  675  TACCTCCCTGAAAGTATATAATTGGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAA  748
            ||||||.||||||||||||||||||||||||||..||.||||||||||||||||.|||||||||||   .||||
Sbjct  963  TACCTCTCTGAAAGTATATAATTGGTTTGCTAATCGACGGAAGGAGATCAAGAGAAGAGCCAATAT---CGCAA  1033

Query  749  TCCTGGAGAGTCATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGAC  822
            |||||||||||||||||||||||||.|||||||||||||||||.||.||||||||.|||||.||||||||.|||
Sbjct 1034  TCCTGGAGAGTCATGGGATAGATGTACAGAGTCCAGGAGGCCATTCCAACAGTGACGATGTGGACGGGAACGAC  1107

Query  823  TACTCTGAGCAGGATACTTGGCAAGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGA  896
            |||||.||||||||.||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108  TACTCCGAGCAGGACACTTGGCAAGCACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGA  1181

Query  897  AGCAGAGAAGG----------------TAG--------AAGA--------------------AGA--GCGGAGG  924
            |||||||||||                |||        ||||                    |||  ||||..|
Sbjct 1182  AGCAGAGAAGGATGACAGCACCAGCCATAGTGACCACCAAGATCCCATCTCGCTAGCTGTGGAGATGGCGGCCG  1255

Query  925  ATC---------------------------------------------------------------------  927
             ||                                                                     
Sbjct 1256  -TCAACCACACTATCTTGGCATTGGCCCGGCAGGGAGCCAATGAAATCAAGACAGAGGCCCTGGATGATGAC  1326