Nucleotide Global Alignment

Description

Query:
TRCN0000472530
Subject:
XM_006506707.2
Aligned Length:
2226
Identities:
1744
Gaps:
201

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCATACAGGCCTCTGGAAAATTCCCACGAGCACAGTGGTGAGGCCAACTCCACACTGCTTTCCTGCCATGAG  74

Query    1  -------------------------------------ATGG------CGGCAGCTACGGGGGATCCTGGACTCT  31
                                                 .|||      |.|.|||.|.||||||.||||||||..
Sbjct   75  GCTTTCCTCATCTGGATGTGAGCACCTGACAGTGAGGCTGGTAAGAACAGTAGCCATGGGGGACCCTGGACTGG  148

Query   32  CTAAACTGCAGTTTGCCCCTTTTAGTAGTGCCTTGGATGTTGGGTTTTGGCATGAGTTGACCCAGAAGAAGCTG  105
            |.||..|||||||.|||||.||||.|||||||.||||.|||||.||.|||||.||..||||||||||||||.||
Sbjct  149  CCAAGTTGCAGTTCGCCCCCTTTAATAGTGCCCTGGACGTTGGCTTCTGGCACGAACTGACCCAGAAGAAGTTG  222

Query  106  AACGAGTATCGGCTGGATGAAGCTCCCAAGGACATTAAGGGTTATTACTACAATGGTGACTCTGCTGGGCTGCC  179
            ||||||||.||.|||||.||.||.|||||.|||||.|||||.||||||||||||||||||||||||||.|||||
Sbjct  223  AACGAGTACCGCCTGGACGAGGCACCCAAAGACATCAAGGGCTATTACTACAATGGTGACTCTGCTGGTCTGCC  296

Query  180  AGCTCGCTTAACATTGGAGTTCAGTGCTTTTGACATGAGTGCTCCCACCCCAGCCCGTTGCTGCCCAGCTATTG  253
            ..|.|||||.||.|||||||||||||||||||||||||||||..||||.||.||||..||||||||.||.||.|
Sbjct  297  CACCCGCTTGACGTTGGAGTTCAGTGCTTTTGACATGAGTGCCTCCACGCCTGCCCACTGCTGCCCGGCCATGG  370

Query  254  GAACACTGTATAACACCAACACACTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTTTTGGAACAAGCAGCA  327
            ||||.|||.|.||||||||||||||.|||.||||.|||||.|||||.||||||||||||.||||.||..|||||
Sbjct  371  GAACCCTGCACAACACCAACACACTTGAGGCTTTTAAGACAGCAGACAAGAAGCTCCTTCTGGAGCAGTCAGCA  444

Query  328  AATGAGATATGGGAATCCATAAAATCAGGCACTGCTCTTGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCTT  401
            ||||||||.||||||.|||||||.|||||..|||||||.||||||||..|.||||||||||||||.||.|||.|
Sbjct  445  AATGAGATCTGGGAAGCCATAAAGTCAGGTGCTGCTCTCGAAAACCCCATGCTCCTCAACAAGTTTCTGCTCCT  518

Query  402  GACATTTGCAGATCTAAAGAAGTACCACTTCTACTATTGGTTTTGCTATCCTGCCCTCTGTCTTCCAGAGAGTT  475
            |||.||.||.||.|||||||||||||||||||||||.||||||||||..||.||||||||||||||.|||||..
Sbjct  519  GACCTTCGCGGACCTAAAGAAGTACCACTTCTACTACTGGTTTTGCTGCCCCGCCCTCTGTCTTCCTGAGAGCA  592

Query  476  TACCTCTCATTCAGGGGCCAGTGGGTTTGGATCAAAGGTTTTCACTAAAACAGATTGAAGCACTAGAGTGTGCA  549
            |.|||||.||.|.|||.||.|||.|.||||||||||||.||||||.|||||||||..|.||.||.|||..|||.
Sbjct  593  TCCCTCTAATCCGGGGACCTGTGAGCTTGGATCAAAGGCTTTCACCAAAACAGATCCAGGCCCTGGAGCATGCC  666

Query  550  TATGATAATCTTTGTCAAACAGAAGGAGTCACAGCTCTTCCTTACTTCTTAATCAAGTATGATGAGAACATGGT  623
            ||||||.||||.||||.|.|.|||||.|||||.||.||.||.|||||||||.|||||||.|||||..|||..||
Sbjct  667  TATGATGATCTGTGTCGAGCCGAAGGCGTCACGGCCCTGCCCTACTTCTTATTCAAGTACGATGACGACACTGT  740

Query  624  GCTGGTTTCCTTGCTTAAACACTACAGTGATTTCTTCCAAGGTCAAAGGACGAAGATAACAATTGGTGTATATG  697
            .|||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||||||.|||||||.||.|
Sbjct  741  TCTGGTCTCCTTGCTCAAACACTACAGTGATTTCTTCCAAGGTCAAAGGACAAAGATAACAGTTGGTGTGTACG  814

Query  698  ATCCCTGTAACTTAGCCCAGTACCCTGGATGGCCTTTGAGGAATTTTTTGGTCCTAGCAGCCCACAGATGGAGT  771
            |||||||||||.|||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.
Sbjct  815  ATCCCTGTAACCTAGCCCAGTACCCTGGATGGCCTTTGAGGAATTTTTTGGTCCTGGCAGCCCACAGATGGAGC  888

Query  772  AGCAGTTTCCAGTCTGTTGAAGTTGTTTGCTTCCGTGACCGTACCATGCAGGGGGCGAGAGACGTTGCCCACAG  845
            .|||||||||||||.||||||||..|.|||||.||.|||||.|||||||||||.||.||||||||..|.||.||
Sbjct  889  GGCAGTTTCCAGTCCGTTGAAGTCCTCTGCTTTCGGGACCGCACCATGCAGGGAGCTAGAGACGTGACACATAG  962

Query  846  CATCATCTTCGAAGTGAAGCTTCCAGAAATGGCATTTAGCCCAGATTGTCCTAAAGCAGTTGGATGGGAAAAGA  919
            |||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||
Sbjct  963  CATCATCTTTGAAGTGAAACTTCCAGAAATGGCATTTAGCCCAGATTGTCCTAAAGCTGTTGGCTGGGAGAAGA  1036

Query  920  ACCAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTCAGTGAATGTATGGACCCTAAAAGGTTAGCTGAGTCA  993
            |||||||||||||||||||.||.|||||||||||||||||||.||||||||||||.||||||.|.|||||||||
Sbjct 1037  ACCAGAAAGGAGGCATGGGTCCGAGGATGGTGAACCTCAGTGGATGTATGGACCCCAAAAGGCTGGCTGAGTCA  1110

Query  994  TCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGTTGTGTCTGT  1067
            ||.||||||||.||||||||.||||||||.|||.|||||||.||.||.||.||||||||||||||.||||||||
Sbjct 1111  TCTGTGGATCTGAATCTCAAGCTGATGTGCTGGCGATTGGTCCCCACCTTGGACTTGGACAAGGTCGTGTCTGT  1184

Query 1068  CAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTTGATGGGTTGGGGCGTGAGAC  1141
            |||.||.||||||||.|||||.||.||||||||.||.|||||.||||||||..|||||||.||||||||.||||
Sbjct 1185  CAAGTGCCTGCTGCTGGGAGCTGGTACCTTGGGGTGTAATGTGGCTAGGACACTGATGGGCTGGGGCGTCAGAC  1258

Query 1142  ACATCACATTTGTGGACAATGCCAAGATCTCCTACTCCAATCCTGTGAGGCAGCCTCTCTATGAGTTTGAAGAT  1215
            |..||||.||||||||.||.|||||||||||||||||||||||.||||||||||||||.|||||.|||||||||
Sbjct 1259  ATGTCACCTTTGTGGATAACGCCAAGATCTCCTACTCCAATCCCGTGAGGCAGCCTCTGTATGAATTTGAAGAT  1332

Query 1216  TGCCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAGAAAATATTCCCCGGTGTGAATGC  1289
            ||.|||||||||||.|||||||||||.|||||.|||||.||.|||||.|||||||||||.|||||.||||||||
Sbjct 1333  TGTCTAGGGGGTGGCAAGCCCAAGGCCCTGGCTGCAGCAGAGCGGCTACAGAAAATATTTCCCGGAGTGAATGC  1406

Query 1290  CAGAGGATTCAACATGAGCATACCTATGCCTGGGCATCCAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCC  1363
            ||||||.||||||||||||||.||.|||||.||.||.||.|||||||||||....|||||..|||||||.||||
Sbjct 1407  CAGAGGGTTCAACATGAGCATCCCCATGCCAGGACACCCTGTGAACTTCTCTGACGTCACGATGGAGCAGGCCC  1480

Query 1364  GCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCTATTGATGGACACCAGGGAG  1437
            ||||||||||||||||.||||||||||||||.||.|.||||||||||.|||||||..|.|||||||||||||||
Sbjct 1481  GCAGAGATGTGGAGCAGCTGGAGCAGCTCATTGATAACCATGATGTCATCTTCCTGCTAATGGACACCAGGGAG  1554

Query 1438  AGCCGGTGGCTTCCTGCCGTCATTGCTGCAAGCAAGAGAAAGCTGGTCATCAATGCTGCTTTGGGATTTGACAC  1511
            |||||||||||||||.|.||.|||||.||.||||||.||||||||||||||||.|||||.|||||.|||||.||
Sbjct 1555  AGCCGGTGGCTTCCTACTGTTATTGCAGCCAGCAAGCGAAAGCTGGTCATCAACGCTGCCTTGGGGTTTGATAC  1628

Query 1512  ATTTGTTGTCATGAGACATGGTCTGAAGAAACCAAAGCAGCAAGGAGCTGGGGACTTGTGTCCAAACCACCCTG  1585
            .||||||||||||||||||||.|||||||||||.||||||||.|||||.||.|||.|.||.||||.|||.|.||
Sbjct 1629  CTTTGTTGTCATGAGACATGGCCTGAAGAAACCCAAGCAGCAGGGAGCCGGAGACCTCTGCCCAAGCCATCTTG  1702

Query 1586  TGGCATCTGCTGACCTCCTGGGCTCATCGCTTTTTGCCAACATCCCTGGTTACAAGCTTGGCTGCTACTTCTGC  1659
            |.|||.|||||||   |||||||||.||.||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1703  TAGCACCTGCTGA---CCTGGGCTCCTCACTTTTTGCCAACATCCCTGGATACAAGCTTGGCTGCTACTTCTGC  1773

Query 1660  AATGATGTGGTGGCCCCAGGAGATTCAACCAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAGG  1733
            ||||||||||||||.||||||||||||||||||||||||||..||||||||||||||||.|||||.||.|||||
Sbjct 1774  AATGATGTGGTGGCTCCAGGAGATTCAACCAGAGACCGGACTCTGGACCAGCAGTGCACAGTGAGCCGCCCAGG  1847

Query 1734  ACTGGCCGTGATTGCAGGAGCCCTGGCCGTGGAATTGATGGTATCTGTTTTGCAGCATCCAGAAGGGGGCTATG  1807
            .|||||||||||||||||.||||||||.|||||..|||||||.|||||..||||||||||.||.||||||||.|
Sbjct 1848  CCTGGCCGTGATTGCAGGTGCCCTGGCTGTGGAGCTGATGGTCTCTGTCCTGCAGCATCCTGAGGGGGGCTACG  1921

Query 1808  CCATTGCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTGTGCCTCACCAG------  1875
            ||||.||||||||||||||.||.||.||||||||||||||.|||||.||.||.|||||||||||||||      
Sbjct 1922  CCATCGCCAGCAGCAGTGATGACCGCATGAATGAGCCTCCCACCTCGCTGGGACTTGTGCCTCACCAGATCCGG  1995

Query 1876  --------------------------------------------------------------------------  1875
                                                                                      
Sbjct 1996  GGTTTTCTGTCACGGTTCGATAATGTTCTTCCTGTCAGCCTGGCATTTGATAAATGTACAGCCTGTTCACCCAA  2069

Query 1876  -GTTCTTGATCAATATGAACGAGAAGGATTTAACTTCCTAGCCAAGGTGTTTAATTCTTCACATTCCTTCTTAG  1948
             |||||||||||.||.||.|||||||||||.|.|||||||||.|||||.|||||.||.||||||||||||||||
Sbjct 2070  AGTTCTTGATCAGTACGAGCGAGAAGGATTCACCTTCCTAGCGAAGGTTTTTAACTCCTCACATTCCTTCTTAG  2143

Query 1949  AAGACTTGACTGGTCTTACATTGCTGCATCAAGAAACCCAAGCTGCTGAGATCTGGGACATGAGCGATGATGAG  2022
            ||||||||||.||||||||..||||.||||||||.|||||||||||||||||||||||||||||.||.||.|||
Sbjct 2144  AAGACTTGACCGGTCTTACCCTGCTCCATCAAGAGACCCAAGCTGCTGAGATCTGGGACATGAGTGACGAGGAG  2217

Query 2023  ACCATC  2028
            ||..||
Sbjct 2218  ACTGTC  2223

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