Nucleotide Global Alignment

Description

Query:
TRCN0000472545
Subject:
NM_001286031.1
Aligned Length:
2258
Identities:
1864
Gaps:
34

Alignment

Query    1  ---------------------ATGGAAGAAGAAGGGCTGGAGTGTCCAAACTCTTCCTCTGAAAAACGCTATTT  53
                                 |||||.|||||.|..|||||...|||.|||.|.||..|.||.|||||||||||
Sbjct    1  ATGAGCTCCCTGCGGGAAGAAATGGATGAAGAGGAACTGGACCATCCGAACGCCTCTCCAGAGAAACGCTATTT  74

Query   54  TCCTGAATCCCTGGATTCCAGCGATGGGGATGAGGAAGAGGTTTTGGCCTGTGAGGATTTGGAACTTAACCCCT  127
            .||.||.|||||.||||||||.||.|||||.|||||||.|||..|||||||.||||||.||||.||.|||||||
Sbjct   75  CCCCGAGTCCCTAGATTCCAGTGACGGGGACGAGGAAGGGGTCCTGGCCTGCGAGGATCTGGAGCTGAACCCCT  148

Query  128  TTGATGGATTGCCATATTCATCACGTTATTATAAACTTCTGAAAGAAAGAGAAGATCTTCCTATATGGAAAGAA  201
            ||||.||.||.||.||||||||.||.|||||.||||||.|||||||.||||||||.|||||.||||||||||||
Sbjct  149  TTGACGGCTTACCGTATTCATCGCGATATTACAAACTTTTGAAAGAGAGAGAAGAGCTTCCGATATGGAAAGAA  222

Query  202  AAATACTCCTTTATGGAGAACCTGCTTCAAAATCAAATCGTGATTGTTTCAGGAGATGCTAAATGTGGTAAGAG  275
            ||.||||||||.|||||||..|||||.|||||.||..|.|||.|.||.|||||.||..|.||.|||||.|||||
Sbjct  223  AAGTACTCCTTCATGGAGAGTCTGCTGCAAAACCAGGTTGTGGTGGTGTCAGGGGACTCCAAGTGTGGCAAGAG  296

Query  276  CGCTCAGGTTCCTCAGTGGTGTGCTGAATATTGTCTTTCCATCCACTACCAGCACGGGGGCGTGATATGCACAC  349
            |.|||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||.|
Sbjct  297  CTCTCAGGTTCCTCAGTGGTGTGCTGAATATTGCCTTTCCATCCATTACCAGCACGGGGGCGTGATATGCACCC  370

Query  350  AGGTCCACAAGCAGACTGTGGTCCAGCTCGCCCTGCGGGTGGCGGATGAAATGGATGTTAACATTGGTCATGAG  423
            |||.||||||.|||||.|..||||||||.||||||||||||||.||.||.||||||||.||.||.||.||.||.
Sbjct  371  AGGCCCACAAACAGACGGCAGTCCAGCTGGCCCTGCGGGTGGCCGACGAGATGGATGTGAATATCGGGCACGAA  444

Query  424  GTTGGCTACGTGATCCCTTTCGAGAACTGCTGTACCAACGAAACAATCCTGAGGTATTGTACTGATGATATGCT  497
            ||.|||||.|||||.|||||.|||||||||||.||||..|||||||||||||||||.|||||||||||.|||||
Sbjct  445  GTCGGCTATGTGATTCCTTTTGAGAACTGCTGCACCACTGAAACAATCCTGAGGTACTGTACTGATGACATGCT  518

Query  498  GCAAAGAGAAATGATGTCCAATCCTTTTTTGGGTAGCTATGGGGTCATCATCTTAGATGATATTCATGAAAGAA  571
            |||.|||||.|||||||||||.|||||..|||||||||||||.|||||||||||.||.|||.|.||.||.||||
Sbjct  519  GCAGAGAGAGATGATGTCCAACCCTTTCCTGGGTAGCTATGGCGTCATCATCTTGGACGATGTCCACGAGAGAA  592

Query  572  GCATTGCAACTGATGTGTTACTTGGACTTCTTAAAGATGTTTTACTAGCAAGACCAGAACTGAAGCTCATAATT  645
            ||.|.||.|||||.|||.|.||.|||||.|||||||||||..|.||.|||||||||||.||||||||||||.||
Sbjct  593  GCCTGGCGACTGACGTGCTGCTCGGACTCCTTAAAGATGTGCTGCTGGCAAGACCAGAGCTGAAGCTCATAGTT  666

Query  646  AACTCCTCACCTCACCTGATCAGCAAACTCAATTCTTATTATGGAAACGTGCCTGTCATAGAAGTGAAAAATAA  719
            ||||.|||.||||.|||.|.|||.|||||||.|||.||.||||||.|||||||||||||||||||||.||||||
Sbjct  667  AACTGCTCGCCTCTCCTCACCAGTAAACTCAGTTCCTACTATGGAGACGTGCCTGTCATAGAAGTGAGAAATAA  740

Query  720  ACACCCTGTGGAGGTTGTGTACCTTAGTGAGGCTCAAAAGGATTCTTTTGAGTCTATTTTACGCCTTATCTTTG  793
            .|||||.||||||||.|||||||||||||.||||||.||||||||.||.||||||.|..|||||||||||||||
Sbjct  741  GCACCCGGTGGAGGTGGTGTACCTTAGTGGGGCTCAGAAGGATTCCTTCGAGTCTGTCATACGCCTTATCTTTG  814

Query  794  AAATTCACCACTCGGGTGAGAAAGGTGACATTGTAGTCTTTCTGGCCTGTGAACAAGATATTGAGAAAGTCTGT  867
            ||||.||||.||||||||||||.||||||.||||.|||||.|||||||||||||||||||||||.|||..||.|
Sbjct  815  AAATCCACCGCTCGGGTGAGAAGGGTGACGTTGTGGTCTTCCTGGCCTGTGAACAAGATATTGAAAAAACCTAT  888

Query  868  GAAACTGTCTATC---AAGGATCTAACCTAAACCCAGATCTTGGAGAACTGGTGGTTGTTCCTTTGTATCCAAA  938
            |||..|||.|.||   |||||||.|||.|||||||||||.|.||.||.||||||||..|.|||||||||||.||
Sbjct  889  GAACTTGTGTGTCAGGAAGGATCCAACTTAAACCCAGATGTGGGCGACCTGGTGGTCATCCCTTTGTATCCCAA  962

Query  939  AGAGAAATGTTCA--TTGTTCAAGCCACTCGATGAAACAGAAAAAAGATGCCAAGTTTATCAAAGAAGAGTGGT  1010
            ||||||  ||.||  .||||||.||||.|.||.|||||.||.||||||||||||||.|||||.|||.|.|||||
Sbjct  963  AGAGAA--GTGCAGCCTGTTCAGGCCAGTGGACGAAACCGAGAAAAGATGCCAAGTGTATCAGAGACGGGTGGT  1034

Query 1011  GTTAACTACTAGCTCTGGAGAGTTTTTGATCTGGAGCAACTCAGTCAGATTTGTTATCGATGTGGGTGTGGAAA  1084
            |.|.||.||.||||..||.||||.|.|||||||||||.||.|.||||.||||||.||.|||||.|||.||||||
Sbjct 1035  GCTGACCACCAGCTGCGGGGAGTCTCTGATCTGGAGCCACACGGTCAAATTTGTCATTGATGTTGGTCTGGAAA  1108

Query 1085  GAAGAAAGGTGTACAACCCGAGAATAAGAGCAAACTCGCTCGTCATGCAGCCCATCAGCCAGAGCCAGGCAGAG  1158
            |||||.||||.||.|||||..|.||.|||||.|||||.||||||.||||||||||||||||.|||||.||||||
Sbjct 1109  GAAGACAGGTATATAACCCCCGGATCAGAGCCAACTCCCTCGTCCTGCAGCCCATCAGCCAAAGCCAAGCAGAG  1182

Query 1159  ATACGCAAGCAGATTCTTGGCTCATCTTCTTCAGGAAAATTTTTCTGCCTGTACACTGAAGAATTTGCCTCCAA  1232
            ||.||.||||||.|.||.||.||.|||.|.|||||||||.|||||||.||||||||||||||||||||||||||
Sbjct 1183  ATCCGGAAGCAGCTCCTCGGGTCTTCTCCCTCAGGAAAACTTTTCTGTCTGTACACTGAAGAATTTGCCTCCAA  1256

Query 1233  AGACATGACGCCACTGAAGCCAGCAGAAATGCAGGAAGCCAACCTAACAAGCATGGTGCTTTTTATGAAGAGGA  1306
            ||||||||.|||.||.||||||||.||||||||||||||||||||.||.|||||||||||.||.|||||||||.
Sbjct 1257  AGACATGAGGCCCCTTAAGCCAGCGGAAATGCAGGAAGCCAACCTGACTAGCATGGTGCTCTTCATGAAGAGGG  1330

Query 1307  TAGACATTGCGGGCCTAGGCCACTGTGACTTCATGAACAGACCAGCACCAGAAAGTTTGATGCAGGCATTGGAA  1380
            |.||||||||.|||||.||||.|||.||||||||||||||.|||||.||||||||..|||||||||||.|||||
Sbjct 1331  TGGACATTGCAGGCCTGGGCCGCTGCGACTTCATGAACAGGCCAGCTCCAGAAAGCCTGATGCAGGCACTGGAA  1404

Query 1381  GACTTAGATTATCTGGCAGCACTGGATAATGATGGAAATCTTTCTGAATTTGGAATCATCATGTCAGAGTTTCC  1454
            ||.||||||||.||||||||.|||||.||.|||||.|||||.|||||.|||||||||||||||||.||||||||
Sbjct 1405  GATTTAGATTACCTGGCAGCCCTGGACAACGATGGGAATCTCTCTGAGTTTGGAATCATCATGTCTGAGTTTCC  1478

Query 1455  TCTTGATCCACAACTCTCGAAGTCTATCTTAGCGTCCTGTGAATTTGACTGTGTAGATGAAGTGCTAACAATCG  1528
            |||.||||||||.|||||.||||||||||||||.|||||||||||||||||||||||.|||.|||||||.||||
Sbjct 1479  TCTGGATCCACAGCTCTCAAAGTCTATCTTAGCATCCTGTGAATTTGACTGTGTAGACGAAATGCTAACCATCG  1552

Query 1529  CGGCCATGGTAACAGCTCCAAATTGCTTTTCACATGTGCCACATGGAGCTGAAGAGGCTGCCTTGACTTGTTGG  1602
            |.|||||||||||||||||.|.||||||||..||.|||||.|||||.|||||.||||||||..|||||||.|||
Sbjct 1553  CTGCCATGGTAACAGCTCCCAGTTGCTTTTTGCACGTGCCTCATGGTGCTGAGGAGGCTGCAGTGACTTGCTGG  1626

Query 1603  AAGACATTTTTACATCCCGAAGGAGATCACTTTACCCTCATCAGCATTTACAAGGCTTACCAAGACACAACTCT  1676
            ||.||.||.||.||.||.|||||.|||||||||||.|||||||...|.|||||.||.||||||||.|||..|||
Sbjct 1627  AAAACGTTCTTGCACCCTGAAGGTGATCACTTTACGCTCATCAATGTCTACAATGCCTACCAAGATACAGTTCT  1700

Query 1677  GAATTCTAGCAGTGAGTACTGTGTGGAAAAGTGGTGTCGTGATTACTTCCTCAACTGTTCAGCACTCAGAATGG  1750
            |||.|||..||.|||..||||||||||.|.||||||||..||||.||||||||.|||.||.||.|||||.||||
Sbjct 1701  GAACTCTGCCAATGAACACTGTGTGGAGATGTGGTGTCACGATTGCTTCCTCAGCTGCTCTGCTCTCAGGATGG  1774

Query 1751  CAGATGTTATTCGAGCTGAACTCTTAGAAATTATCAAGCGAATCGAGCTTCCCTATGCAGAACCTGCTTTTGGC  1824
            ||||.|||||.|||||.|||||||||||.||.||||||||.||||||||||||||||||||.|||||.||||||
Sbjct 1775  CAGACGTTATCCGAGCAGAACTCTTAGAGATCATCAAGCGGATCGAGCTTCCCTATGCAGAGCCTGCCTTTGGC  1848

Query 1825  TCCAAGGAAAACACTCTAAACATAAAGAAAGCTCTTCTGTCCGGTTACTTTATGCAGATTGCTCGGGATGTTGA  1898
            ||||||||||||....|.|||||.||||||||.||.||.||.||.|||||.|||||||||||||||||||||||
Sbjct 1849  TCCAAGGAAAACGGGTTGAACATCAAGAAAGCGCTGCTCTCTGGGTACTTCATGCAGATTGCTCGGGATGTTGA  1922

Query 1899  TGGATCAGGTAACTACTTAATGCTGACACATAAGCAGGTTGCTCAGCTGCATCCCCTGTCTGGTTACTCAATCA  1972
            .||.||||||||||||||.|||||.||||||||||||||||||||||||||||||.|.||..|.||.||.||||
Sbjct 1923  CGGGTCAGGTAACTACTTGATGCTTACACATAAGCAGGTTGCTCAGCTGCATCCCTTATCAAGCTATTCCATCA  1996

Query 1973  CCAAGAAGATGCCAGAGTGGGTCCTCTTCCATAAATTCAGCATTTCTGAGAACAACTACATCAGGATTACCTCA  2046
            |||||||||||||.|||||||||||||||||..|.||||||||.|||||||||||||||||||||.|..||||.
Sbjct 1997  CCAAGAAGATGCCCGAGTGGGTCCTCTTCCACCAGTTCAGCATATCTGAGAACAACTACATCAGGGTCGCCTCC  2070

Query 2047  GAAATCTCTCCTGAACTATTTATGCAGCTGGTACCACAATACTATTTCAGTAATCTGCCTCCTAGTGAAAGTAA  2120
            |.|.||||.|||||.|||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||
Sbjct 2071  GCAGTCTCCCCTGAGCTATTTATGCAGCTGGTACCACAGTACTATTTCAGTAACCTGCCTCCTAGTGAAAGCAA  2144

Query 2121  GGACATTCTACAGCAAGTAGTGGATCACCTATCCCCTGTGTCAACAATGAATAAGGAACAGCAAATGTGTGAGA  2194
            ||||||.||||||||||..|..|..||||||.||.|.|   .|||..||||.|||||.|||.|..|||||||.|
Sbjct 2145  GGACATCCTACAGCAAGCTGCAGGCCACCTACCCACAG---AAACTGTGAACAAGGACCAGGATGTGTGTGACA  2215

Query 2195  CGTGCCC---TGAAACTGAACAGAGATGCACTCTCCAG  2229
            .||||||   ||..|||||.|||||||||||..|||||
Sbjct 2216  AGTGCCCAGATGCTACTGAGCAGAGATGCACAATCCAG  2253

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