Nucleotide Global Alignment

Description

Query:
TRCN0000472732
Subject:
XR_001743501.1
Aligned Length:
3048
Identities:
177
Gaps:
2853

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAATAAACGTGGCGGGACGTATGTGTCATGGCGCTCTCCATCTAAAGTCTGTGCAGCTTCCGGAGAGTGGCGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTGATTTTCTCACTTTGGACTGGTTTTTACTTCCCGACTTCTGGACTCATCTTTCAAGAGGACTTTAGACTAAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGCAGATAATTAAGAGAATATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGAAGATTCAAAACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAAAAATATTTGCAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAATTACAGAAAATGCATCCGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CACTTTAGAAACTCAATTAAAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGGAGGAGACAATTAAAGGTCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGGGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCACGATTGGATTTGCCGAAGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGCTTGTACCTACTGCAAAACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAGATA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAGCCAAACAATCTTTTCAAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCTACGCTTTTCTGCACATACC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTGGCTGACTTCAAAAGAGTAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTGTGGTTTTCCTGGAGAAACA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCCTGTTTATTAACCAATTTTA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGATTGGTGAAAGACAACAAGTGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TAGTAACAGAAGAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTTTAGTGCCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAGAACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTCAGTGTGAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGCTCTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTCTATAATTAGAATACAACTAATGGAAACATCTATA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AAGAAGAATACATTTCTAATTAAAATCTTCAATGAACAGGAAAGCGACATCTCCATTCTCCAAGGGCAATAATT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGTACTGGTCATGCTGCCTCCTTCTCAGCCACTCTTCTTAATGAGGCTCCCCCTGTCTCACATTGAGTTGGGCC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CATTGGTTATTTGACCTAAAACCTAATCACCGCTACCATAGCACATCCTTCAAATTAAACTGCTTTTGGTTTAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTTTAGCAAGAAATGCAAGCGGTTGCATTTTTTTCTGTTTGTTTCAATCTCTAATCTTTAAGTCAGAACCTAAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGTACAGTGGCTCTGGCCATCTTTTCCTCATGTGGAAGAATTTTCTATCTTTAATAAACTTTTTCTTTGTTTTT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTTTTCCAGATGGAGTTTCGCTCTTGTCCCCCAGGCTGGAGTGGTGCAGTGGCACGATCTCAGGTCACTGCAAC  2146

Query    1  ----------------------AT-----GGCCT---CCTCCCAAGTAGCTGGGATTACAGG--TGCGTGCCAC  42
                                  ||     .||||   |||||||||||||||||||||||||  |||  |||||
Sbjct 2147  CTCTGCCTCCTGGGTTCAAACGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGC--GCCAC  2218

Query   43  CACGCTGGGCC-GA-----TTTTTGTGTTTTCGGTAGAGACGGGGTTTCACTGTGTTGGCCAGGCTGGTCTTGA  110
            ||.||    || ||     |||||||||||||.||||||||||.|||||||..|||||||||||||.||||.||
Sbjct 2219  CAAGC----CCAGACAATTTTTTTGTGTTTTCAGTAGAGACGGAGTTTCACCATGTTGGCCAGGCTAGTCTCGA  2288

Query  111  ACTCCTGACCTCAAGTGATCCTCCCACCTTGGCCTCCCAAGGTGCTGGGATTGCAGGCGTGAGCCACCGTGCCC  184
            |||||||||||||||||||||.|||.|||.||||||||||.|||||.|||||.||||||||||||||.|.||||
Sbjct 2289  ACTCCTGACCTCAAGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACTGCGCCC  2362

Query  185  GGCCTC--------AGAGT----AGT---TCT------------------------------------------  201
            ||||||        |.|.|    |||   |||                                          
Sbjct 2363  GGCCTCTTTAATAAATATTTTTAAGTGCATCTTCCCCTTCAGGCTTTGTTTGGAGTCCCAGTGCTACAAACATT  2436

Query  202  --------------------------------------------------------------------------  201
                                                                                      
Sbjct 2437  GTATTTTTCACAGCAGATGTGTTCCTGAAAAGTGTATAGAAACCTGTTCTGGGAACCTGAATGCTTTTGGAATG  2510

Query  202  --------------------------------------------------------------------------  201
                                                                                      
Sbjct 2511  CACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCAACATTCTGTGAAATATGAAACTGGAAAACTGGATTTGT  2584

Query  202  --------------------------------------------------------------------------  201
                                                                                      
Sbjct 2585  CGAAAACTAATTGTGCCCATTTTCTCACATTTTTGATCCATTGGGGTTTTTTTTTTGTTTTTGTTTTTTTTTTT  2658

Query  202  --------------------------------------------------------------------------  201
                                                                                      
Sbjct 2659  TTTTGAGTCAAGGTCTCACTCTGTCACCCTGGCTGGAGTGCAATGGCACTATCTTGGCTCACTGCAGCCTTGAC  2732

Query  202  --------------------------------------------------------------------------  201
                                                                                      
Sbjct 2733  CTCCTGGACTCAAGCAGTCCTCCTACCTCAGCCTCCCTAATAGCCAGGGGCTACAGGCATATACCACCATGCCC  2806

Query  202  --------------------------------------------------------------------------  201
                                                                                      
Sbjct 2807  AACTAATTTTTTAATTTTTTGTAGAGATGAGTGTCACTATGTTGCCCAGGCTTGCCTGGAACTCCTAGCCTCAA  2880

Query  202  --------------------------------------------------------------------------  201
                                                                                      
Sbjct 2881  GCAGTCTTCTTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTCCACCCAGCCCAGATTAAAT  2954

Query  202  --------------------------------------------------------------------------  201
                                                                                      
Sbjct 2955  GTTTTTATTTCTACCTGCCATCATTGGTCTTTACTAAGTGAAGTGACTTCTTTCTTTAACAATAAATAGAATTG  3028

Query  202  --------------  201
                          
Sbjct 3029  GTATACTAAGCAAA  3042

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