Nucleotide Global Alignment
Description
- Query:
- TRCN0000472736
- Subject:
- NM_001146032.2
- Aligned Length:
- 2469
- Identities:
- 946
- Gaps:
- 1479
Alignment
Query 1 ------ATGGCGTATTTCATCGAGAATTTTTGGGGGGAAAAAAATAGTGGCTTTGATGTCCTCTACCATAATAT 68
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTCATGGCGTATTTCGTCGAGAATTTTTGGGGGGAAAAAAATAGTGGCTTTGATGTCCTCTACCATAATAT 74
Query 69 GAAACATGGACAGATATCGACAAAAGAACTAGCAGATTTTGTAAGGGAACGAGCTACCATAGAGGAGGCATACT 142
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAACATGGACAGATATCAACAAAAGAACTAGCAGATTTTGTAAGGGAACGAGCTACCATAGAGGAGGCATACT 148
Query 143 CCAGGTCAATGACAAAACTAGCAAAATCTGCAAGCAATTATTCACAACTTGGAACATTTGCACCAGTATGGGAT 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCAGGTCAATGACAAAACTAGCAAAATCTGCAAGCAATTATTCACAACTTGGAACATTTGCACCAGTATGGGAT 222
Query 217 GTATTCAAAACATCTACAGAGAAATTAGCAAATTGTCACTTGGATCTTGTTAGAAAATTACAAGAATTAATAAA 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTATTCAAAACATCTACAGAGAAATTAGCAAATTGTCACTTGGATCTTGTTAGAAAATTACAAGAATTAATAAA 296
Query 291 GGAAGTTCAGAAGTATGGAGAAGAACAAGTAAAGTCTCATAAAAAGACTAAAGAAGAAGTTGCAGGAACTCTGG 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAAGTTCAGAAGTATGGAGAAGAACAAGTAAAGTCTCATAAAAAGACTAAAGAAGAAGTTGCAGGAACTCTGG 370
Query 365 AAGCTGTCCAAACCATTCAGAGCATAACTCAGGCCCTCCAGAAATCCAAGGAAAATTACAATGCCAAGTGTGTA 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGCTGTCCAAACCATTCAGAGCATAACTCAGGCCCTCCAGAAATCCAAGGAAAATTACAATGCCAAGTGTGTA 444
Query 439 GAACAGGAGCGTTTGAAAAAGGAAGGAGCTACACAAAGAGAAATAGAAAAGGCAGCTGTTAAATCTAAGAAAGC 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAACAGGAGCGTTTGAAAAAGGAAGGAGCTACACAAAGAGAAATAGAAAAGGCAGCTGTTAAATCTAAGAAAGC 518
Query 513 TACAGATACTTATAAACTCTATGTGGAAAAATATGCATTAGCAAAAGCTGATTTCGAACAGAAAATGACAGAAA 586
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TACAGATACCTATAAACTCTATGTGGAAAAATATGCATTAGCAAAAGCTGATTTCGAACAGAAAATGACAGAAA 592
Query 587 CAGCTCAGAAATTTCAAGATATTGAAGAAACTCATCTCATTCACATAAAGGAAATTATAGGATCCTTGTCAAAT 660
|||||
Sbjct 593 CAGCT--------------------------------------------------------------------- 597
Query 661 GCTATAAAGGAAATTCATTTGCAGATAGGCCAGGTCCATGAAGAATTTATAAATAACATGGCTAATACTACAGT 734
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 ------------------------------CAGGTCCATGAAGAATTTATAAATAACATGGCTAATACTACAGT 641
Query 735 TGAAAGTTTGATACAAAAATTTGCTGAGTCAAAAGGCACTGGGAAGGAAAGACCTGGCCTCATTGAATTTGAAG 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 642 TGAAAGTTTGATACAAAAATTTGCTGAGTCAAAAGGCACTGGGAAGGAAAGACCTGGCCTCATTGAATTTGAAG 715
Query 809 AATGTGACACTGCTAGTGCAGTTGAAGGTATAAAACCAAGGAAAAGAAAGACCTTTGCTTTGCCAGGAATCATT 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 AATGTGACACTGCTAGTGCAGTTGAAGGTATAAAACCAAGGAAAAGAAAGACCTTTGCTTTGCCAGGAATCATT 789
Query 883 AAAAAGGAAAAAGATGCAGAATCTGT-----------ATGGAGTTTCA----------CTGTTGTTGCCCAGGT 935
|||||||||||||||||||||||||| |||.||.|||| |||.|||.|
Sbjct 790 AAAAAGGAAAAAGATGCAGAATCTGTGGAATGTCCTGATGCAGATTCATTGAACATTCCTGATGTAG------- 856
Query 936 TGGAATGCA-ATGGCGCGATCTTGGCTTACTGCATTCTCCACC------------------TCCCAGGTTCAAG 990
|||.| |.||| |||.|.|| |..||| |.||| |||
Sbjct 857 ----ATGAAGAAGGC------------TACAGTAT--TAAACCAGAAACAAATCAGAATGATACCA-----AAG 907
Query 991 CGA-----TTCTCCTC--CTA---CCTCAGCCTCC-----------------CAAGTAGCTGG-----AATTAC 1032
.|| ||||.||| ||| ..||.|.|||| .|||||.| || |||||
Sbjct 908 AGAACCATTTCTACTCATCTAGTGATTCTGACTCCGAAGATGAAGAACCAAAGAAGTATC-GGATAGAAATTA- 979
Query 1033 GGCGCCCA-----CCA------CCACATC------TGGCTAATTTTT---TGTATTTTTAGTAGAGACAGGG-- 1084
.|||.| ||| .|||||| ||||| |.||| ||.|||...||||...|.||||
Sbjct 980 --AGCCTATGCATCCAAATAACTCACATCACACAATGGCT--TCTTTGGATGAATTAAAAGTATCTATAGGGAA 1049
Query 1085 --------TTTCACC----ATAT--------TGGCCAG----GCTG-GTCGCGAACTCCTGAC--CTCAGG--- 1128
|.||.|| |||| .|.|||| |.|| .||| |||.| ||.| .|.|||
Sbjct 1050 TATAACACTCTCCCCAGCAATATCTAGACACAGTCCAGTACAGATGAATCG-GAATT--TGTCTAATGAGGAGT 1120
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1121 TAACAAAATCAAAGCCATCTGCTCCACCCAATGAAAAAGGAACCAGTGATTTACTTGCTTGGGACCCCCTATTT 1194
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1195 GGACCATCTCTTGATTCATCTTCTTCATCTTCACTAACTTCATCATCATCAGCCAGGCCCACAACTCCTCTTTC 1268
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1269 TGTAGGCACCATTGTCCCACCTCCGAGGCCTGCTTCCAGACCAAAGCTTACTTCAGGCAAACTCAGTGGGATTA 1342
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1343 ATGAAATACCCAGGCCATTCAGCCCACCTGTAACTTCCAACACCAGCCCACCTCCTGCTGCACCATTAGCCCGG 1416
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1417 GCAGAAAGTTCTTCTTCTATCTCATCATCTGCTTCATTGAGTGCTGCCAATACTCCAACAGTAGGTGTGTCACG 1490
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1491 GGGTCCCAGCCCTGTCAGCCTTGGAAATCAGGATACCTTACCTGTGGCAGTTGCCCTTACAGAATCTGTTAATG 1564
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1565 CCTACTTTAAAGGAGCAGATCCCACCAAGTGTATTGTGAAGATCACTGGTGATATGACAATGTCATTTCCAAGT 1638
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1639 GGAATTATTAAAGTCTTCACCAGCAATCCAACTCCAGCTGTGTTGTGCTTCAGGGTGAAAAATATCAGCAGACT 1712
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1713 AGAGCAGATTCTTCCAAATGCACAGCTTGTGTTCAGTGATCCATCACAATGTGATTCCAACACAAAAGATTTTT 1786
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1787 GGATGAACATGCAAGCTGTTACAGTCTACCTCAAGAAGCTGTCAGAGCAAAATCCAGCTGCTTCTTATTATAAT 1860
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1861 GTAGATGTATTAAAGTATCAGGTATCATCAAATGGTATTCAGTCCACTCCTCTGAATCTTGCAACATACTGGAA 1934
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1935 ATGTAGTGCTAGCACCACAGATCTTAGAGTGGATTATAAATACAATCCAGAAGCTATGGTGGCACCTAGTGTGC 2008
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2009 TTTCCAACATACAGGTGGTGGTACCAGTGGATGGAGGAGTAACGAACATGCAGTCCCTTCCCCCTGCAATATGG 2082
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2083 AATGCAGAACAAATGAAAGCCTTTTGGAAATTGTCTAGTATTTCAGAAAAATCAGAAAATGGAGGTTCTGGGTC 2156
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2157 CCTCCGAGCAAAATTTGATCTTTCAGAAGGACCTAGTAAACCCACGACACTTGCAGTACAATTCCTCAGCGAGG 2230
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2231 GAAGTACCCTTTCAGGAGTAGATTTCGAACTTGTGGGCACTGGCTATAGGCTTTCCTTAATAAAGAAGCGGTTT 2304
Query 1129 --------------------------- 1128
Sbjct 2305 GCTACTGGACGATACCTGGCGGATTGT 2331
