Nucleotide Global Alignment
Description
- Query:
- TRCN0000472736
- Subject:
- XM_017009016.2
- Aligned Length:
- 2469
- Identities:
- 941
- Gaps:
- 1485
Alignment
Query 1 ------ATGGCGTATTTCATCGAGAATTTTTGGGGGGAAAAAAATAGTGGCTTTGATGTCCTCTACCATAATAT 68
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTCATGGCGTATTTCGTCGAGAATTTTTGGGGGGAAAAAAATAGTGGCTTTGATGTCCTCTACCATAATAT 74
Query 69 GAAACATGGACAGATATCGACAAAAGAACTAGCAGATTTTGTAAGGGAACGAGCTACCATAGAGGAGGCATACT 142
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAACATGGACAGATATCAACAAAAGAACTAGCAGATTTTGTAAGGGAACGAGCTACCATAGAGGAGGCATACT 148
Query 143 CCAGGTCAATGACAAAACTAGCAAAATCTGCAAGCAATTATTCACAACTTGGAACATTTGCACCAGTATGGGAT 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCAGGTCAATGACAAAACTAGCAAAATCTGCAAGCAATTATTCACAACTTGGAACATTTGCACCAGTATGGGAT 222
Query 217 GTATTCAAAACATCTACAGAGAAATTAGCAAATTGTCACTTGGATCTTGTTAGAAAATTACAAGAATTAATAAA 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTATTCAAAACATCTACAGAGAAATTAGCAAATTGTCACTTGGATCTTGTTAGAAAATTACAAGAATTAATAAA 296
Query 291 GGAAGTTCAGAAGTATGGAGAAGAACAAGTAAAGTCTCATAAAAAGACTAAAGAAGAAGTTGCAGGAACTCTGG 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAAGTTCAGAAGTATGGAGAAGAACAAGTAAAGTCTCATAAAAAGACTAAAGAAGAAGTTGCAGGAACTCTGG 370
Query 365 AAGCTGTCCAAACCATTCAGAGCATAACTCAGGCCCTCCAGAAATCCAAGGAAAATTACAATGCCAAGTGTGTA 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGCTGTCCAAACCATTCAGAGCATAACTCAGGCCCTCCAGAAATCCAAGGAAAATTACAATGCCAAGTGTGTA 444
Query 439 GAACAGGAGCGTTTGAAAAAGGAAGGAGCTACACAAAGAGAAATAGAAAAGGCAGCTGTTAAATCTAAGAAAGC 512
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAACAGGAGCGTTTGAAAAAGGAAGGAGCTACACAAAGAGAAATAGAAA------------------------- 493
Query 513 TACAGATACTTATAAACTCTATGTGGAAAAATATGCATTAGCAAAAGCTGATTTCGAACAGAAAATGACAGAAA 586
Sbjct 494 -------------------------------------------------------------------------- 493
Query 587 CAGCTCAGAAATTTCAAGATATTGAAGAAACTCATCTCATTCACATAAAGGAAATTATAGGATCCTTGTCAAAT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 494 ------AGAAATTTCAAGATATTGAAGAAACTCATCTCATTCACATAAAGGAAATTATAGGATCCTTGTCAAAT 561
Query 661 GCTATAAAGGAAATTCATTTGCAGATAGGCCAGGTCCATGAAGAATTTATAAATAACATGGCTAATACTACAGT 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 562 GCTATAAAGGAAATTCATTTGCAGATAGGCCAGGTCCATGAAGAATTTATAAATAACATGGCTAATACTACAGT 635
Query 735 TGAAAGTTTGATACAAAAATTTGCTGAGTCAAAAGGCACTGGGAAGGAAAGACCTGGCCTCATTGAATTTGAAG 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 636 TGAAAGTTTGATACAAAAATTTGCTGAGTCAAAAGGCACTGGGAAGGAAAGACCTGGCCTCATTGAATTTGAAG 709
Query 809 AATGTGACACTGCTAGTGCAGTTGAAGGTATAAAACCAAGGAAAAGAAAGACCTTTGCTTTGCCAGGAATCATT 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 710 AATGTGACACTGCTAGTGCAGTTGAAGGTATAAAACCAAGGAAAAGAAAGACCTTTGCTTTGCCAGGAATCATT 783
Query 883 AAAAAGGAAAAAGATGCAGAATCTGT-----------ATGGAGTTTCA----------CTGTTGTTGCCCAGGT 935
|||||||||||||||||||||||||| |||.||.|||| |||.|||.|
Sbjct 784 AAAAAGGAAAAAGATGCAGAATCTGTGGAATGTCCTGATGCAGATTCATTGAACATTCCTGATGTAG------- 850
Query 936 TGGAATGCA-ATGGCGCGATCTTGGCTTACTGCATTCTCCACC------------------TCCCAGGTTCAAG 990
|||.| |.||| |||.|.|| |..||| |.||| |||
Sbjct 851 ----ATGAAGAAGGC------------TACAGTAT--TAAACCAGAAACAAATCAGAATGATACCA-----AAG 901
Query 991 CGA-----TTCTCCTC--CTA---CCTCAGCCTCC-----------------CAAGTAGCTGG-----AATTAC 1032
.|| ||||.||| ||| ..||.|.|||| .|||||.| || |||||
Sbjct 902 AGAACCATTTCTACTCATCTAGTGATTCTGACTCCGAAGATGAAGAACCAAAGAAGTATC-GGATAGAAATTA- 973
Query 1033 GGCGCCCA-----CCA------CCACATC------TGGCTAATTTTT---TGTATTTTTAGTAGAGACAGGG-- 1084
.|||.| ||| .|||||| ||||| |.||| ||.|||...||||...|.||||
Sbjct 974 --AGCCTATGCATCCAAATAACTCACATCACACAATGGCT--TCTTTGGATGAATTAAAAGTATCTATAGGGAA 1043
Query 1085 --------TTTCACC----ATAT--------TGGCCAG----GCTG-GTCGCGAACTCCTGAC--CTCAGG--- 1128
|.||.|| |||| .|.|||| |.|| .||| |||.| ||.| .|.|||
Sbjct 1044 TATAACACTCTCCCCAGCAATATCTAGACACAGTCCAGTACAGATGAATCG-GAATT--TGTCTAATGAGGAGT 1114
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1115 TAACAAAATCAAAGCCATCTGCTCCACCCAATGAAAAAGGAACCAGTGATTTACTTGCTTGGGACCCCCTATTT 1188
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1189 GGACCATCTCTTGATTCATCTTCTTCATCTTCACTAACTTCATCATCATCAGCCAGGCCCACAACTCCTCTTTC 1262
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1263 TGTAGGCACCATTGTCCCACCTCCGAGGCCTGCTTCCAGACCAAAGCTTACTTCAGGCAAACTCAGTGGGATTA 1336
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1337 ATGAAATACCCAGGCCATTCAGCCCACCTGTAACTTCCAACACCAGCCCACCTCCTGCTGCACCATTAGCCCGG 1410
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1411 GCAGAAAGTTCTTCTTCTATCTCATCATCTGCTTCATTGAGTGCTGCCAATACTCCAACAGTAGGTGTGTCACG 1484
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1485 GGGTCCCAGCCCTGTCAGCCTTGGAAATCAGGATACCTTACCTGTGGCAGTTGCCCTTACAGAATCTGTTAATG 1558
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1559 CCTACTTTAAAGGAGCAGATCCCACCAAGTGTATTGTGAAGATCACTGGTGATATGACAATGTCATTTCCAAGT 1632
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1633 GGAATTATTAAAGTCTTCACCAGCAATCCAACTCCAGCTGTGTTGTGCTTCAGGGTGAAAAATATCAGCAGACT 1706
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1707 AGAGCAGATTCTTCCAAATGCACAGCTTGTGTTCAGTGATCCATCACAATGTGATTCCAACACAAAAGATTTTT 1780
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1781 GGATGAACATGCAAGCTGTTACAGTCTACCTCAAGAAGCTGTCAGAGCAAAATCCAGCTGCTTCTTATTATAAT 1854
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1855 GTAGATGTATTAAAGTATCAGGTATCATCAAATGGTATTCAGTCCACTCCTCTGAATCTTGCAACATACTGGAA 1928
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1929 ATGTAGTGCTAGCACCACAGATCTTAGAGTGGATTATAAATACAATCCAGAAGCTATGGTGGCACCTAGTGTGC 2002
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2003 TTTCCAACATACAGGTGGTGGTACCAGTGGATGGAGGAGTAACGAACATGCAGTCCCTTCCCCCTGCAATATGG 2076
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2077 AATGCAGAACAAATGAAAGCCTTTTGGAAATTGTCTAGTATTTCAGAAAAATCAGAAAATGGAGGTTCTGGGTC 2150
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2151 CCTCCGAGCAAAATTTGATCTTTCAGAAGGACCTAGTAAACCCACGACACTTGCAGTACAATTCCTCAGCGAGG 2224
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 2225 GAAGTACCCTTTCAGGAGTAGATTTCGAACTTGTGGGCACTGGCTATAGGCTTTCCTTAATAAAGAAGCGGTTT 2298
Query 1129 --------------------------- 1128
Sbjct 2299 GCTACTGGACGATACCTGGCGGATTGT 2325
