Nucleotide Global Alignment
Description
- Query:
- TRCN0000472749
- Subject:
- XR_001738779.1
- Aligned Length:
- 3221
- Identities:
- 477
- Gaps:
- 2724
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCGTGCTGGGTGCGGGTGCGGGTGCGGGGTTGGGCCTGCGCATCGGGTGAGACGCTGGCTGCTTGCGGCTAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGATGGTAATTGCCTGCCTCGCGCTAGCAGGAAGGCACACCTGTTGTCCTTAACTGACTTTCCGGGTCATCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACTTCTTCAGAAGTGTTCCTTTTCCCTCCCAGCAAATATGGAAGACTGACTATCCTGATATTCCCAGACATTC 222
Query 1 ---------------------------------ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAG 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTTGCTGTGATTTCTGCTCTGTTAAAAGCGAAAATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAG 296
Query 42 TTCTCAGATCATCACTTCGGTGGTCAGTGTTGTAAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAA 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTCTCAGATCATCACTTCGGTGGTCAGTGTTGTAAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAA 370
Query 116 GCGTAGATGTTAAACTGGAGAACTATGGATTTGATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCT 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCGTAGATGTTAAACTGGAGAACTATGGATTTGATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCT 444
Query 190 GTTGATGCACCTGTAATGGCAATGAAGTACTACACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGAC 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTGATGCACCTGTAATGGCAATGAAGTACTACACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGAC 518
Query 264 AACTTACGGTTTTCGTGGAGAAGCCTTGGGGTCAATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGG 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AACTTACGGTTTTCGTGGAGAAGCCTTGGGGTCAATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGG 592
Query 338 CTGCTGATAATTTTAGCACCCAGTATGTTTTAGATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTT 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGCTGATAATTTTAGCACCCAGTATGTTTTAGATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTT 666
Query 412 GGTCAAG-----------------------------------------GTAAGAAAGTAGCTT----------- 433
||||||| |||||||||.||.||
Sbjct 667 GGTCAAGGTACAACTGTAACTGCTTTAAGATTATTTAAGAATCTACCTGTAAGAAAGCAGTTTTACTCAACTGC 740
Query 434 -------TGTA----------TACAAACAT-----------TCTTTACCTTT------------TCTGTCTTA- 466
|||| .|.|||.|| ||.|.|.|||| .|||.||||
Sbjct 741 AAAAAAATGTAAAGATGAAATAAAAAAGATCCAAGATCTCCTCATGAGCTTTGGTATCCTTAAACCTGACTTAA 814
Query 467 --ATTG--TTGGTTTAAAAAAAAAAAGTTACTCGG--------------------------------------- 497
|||| ||.||..|.||.||...|||||.|.||
Sbjct 815 GGATTGTCTTTGTACATAACAAGGCAGTTATTTGGCAGAAAAGCAGAGTATCAGATCACAAGATGGCTCTCATG 888
Query 498 -------------------------------------------------------------------------- 497
Sbjct 889 TCAGTTCTGGGGACTGCTGTTATGAACAATATGGAATCCTTTCAGTACCACTCTGAAGAATCTCAGATTTATCT 962
Query 498 -------------------------------------------------------------------------- 497
Sbjct 963 CAGTGGATTTCTTCCAAAGTGTGATGCAGACCACTCTTTCACTAGTCTTTCAACACCAGAAAGAAGTTTCATCT 1036
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1037 TCATAAACAGTCGACCAGTACATCAAAAAGATATCTTAAAGTTAATCCGACATCATTACAATCTGAAATGCCTA 1110
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1111 AAGGAATCTACTCGTTTGTATCCTGTTTTCTTTCTGAAAATCGATGTTCCTACAGCTGATGTTGATGTAAATTT 1184
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1185 AACACCAGATAAAAGCCAAGTATTATTACAAAATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTGATGACGA 1258
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1259 CTTGTTATGGACCATTACCTAGTACAAATTCTTATGAAAATAATAAAACAGATGTTTCCGCAGCTGACATCGTT 1332
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1333 CTTAGTAAAACAGCAGAAACAGATGTGCTTTTTAATAAAGTGGAATCATCTGGAAAGAATTATTCAAATGTTGA 1406
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1407 TACTTCAGTCATTCCATTCCAAAATGATATGCATAATGATGAATCTGGAAAAAACACTGATGATTGTTTAAATC 1480
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1481 ACCAGATAAGTATTGGTGACTTTGGTTATGGTCATTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAG 1554
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1555 AATGCATTTCAGGACATTTCAATGAGTAATGTATCATGGGAGAACTCTCAGACGGAATATAGTAAAACTTGTTT 1628
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1629 TATAAGTTCCGTTAAGCACACCCAGTCAGAAAATGGCAATAAAGACCATATAGATGAGAGTGGGGAAAATGAGG 1702
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1703 AAGAAGCAGGTCTTGAAAACTCTTCGGAAATTTCTGCAGATGAGTGGAGCAGGGGAAATATACTTAAAAATTCA 1776
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1777 GTGGGAGAGAATATTGAACCTGTGAAAATTTTAGTGCCTGAAAAAAGTTTACCATGTAAAGTAAGTAATAATAA 1850
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1851 TTATCCAATCCCTGAACAAATGAATCTTAATGAAGATTCATGTAACAAAAAATCAAATGTAATAGATAATAAAT 1924
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1925 CTGGAAAAGTTACAGCTTATGATTTACTTAGCAATCGAGTAATCAAGAAACCCATGTCAGCAAGTGCTCTTTTT 1998
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1999 GTTCAAGATCATCGTCCTCAGTTTCTCATAGAAAATCCTAAGACTAGTTTAGAGGATGCAACACTACAAATTGA 2072
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2073 AGAACTGTGGAAGACATTGAGTGAAGAGGAAAAACTGAAATATGAAGAGAAGGCTACTAAAGACTTGGAACGAT 2146
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2147 ACAATAGTCAAATGAAGAGAGCCATTGAACAGGAGTCACAAATGTCACTAAAAGATGGCAGAAAAAAGATAAAA 2220
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2221 CCCACCAGCGCATGGAATTTGGCCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCAAAACTTGATGA 2294
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2295 ACTCCTTCAGTCCCAAATTGAAAAAAGAAGGAGTCAAAATATTAAAATGGTACAGATCCCCTTTTCTATGAAAA 2368
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2369 ACTTAAAAATAAATTTTAAGAAACAAAACAAAGTTGACTTAGAAGAGAAGGATGAACCTTGCTTGATCCACAAT 2442
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2443 CTCAGGTTTCCTGATGCATGGCTAATGACATCCAAAACAGAGGTAATGTTATTAAATCCATATAGAGTAGAAGA 2516
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2517 AGCCCTGCTATTTAAAAGACTTCTTGAGAATCATAAACTTCCTGCAGAGCCACTGGAAAAGCCAATTATGTTAA 2590
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2591 CAGAGAGACGTTTTATATAAAATGACAGCAGATGACCAAAGATACAGTGGATCAACTTACCTGTCTGATCCTCG 2664
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2665 TCTTACAGCGAATGGTTTCAAGATAAAATTGATACCAGGAGTTTCAATTACTGAAAATTACTTGGAAATAGAAG 2738
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2739 GAATGGCTAATTGTCTCCCATTCTATGGAGTAGCAGATTTAAAAGAAATTCTTAATGCTATATTAAACAGAAAT 2812
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2813 GCAAAGGAAGTTTATGAATGTAGACCTCGCAAAGTGATAAGTTATTTAGAGGGAGAAGCAGTGCGTCTATCCAG 2886
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2887 ACAATTACCCATGTACTTATCAAAAGAGGACATCCAAGACATTATCTACAGAATGAAGCACCAGTTTGGAAATG 2960
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2961 AAATTAAAGAGTGTGTTCATGGTCGCCCATTTTTTCATCATTTAACCTATCTTCCAGAAACTACATGATTAAAT 3034
Query 498 -------------------------------------------------------------------------- 497
Sbjct 3035 ATGTTTAAGAAGATTAGTTACCATTGAAATTGGTTCTGTCATAAAACAGCATGAGTCTGGTTTTAAATTATCTT 3108
Query 498 -------------------------------------------------------------------------- 497
Sbjct 3109 TGTATTATGTGTCACATGGTTATTTTTTAAATGAGGATTCACTGACTTGTTTTTATATTGAAAAAAGTTCCACG 3182
Query 498 --------------------------------------- 497
Sbjct 3183 TATTGTAGAAAACGTAAATAAACTAATATAGACTATTCA 3221
