Nucleotide Global Alignment
Description
- Query:
- TRCN0000472749
- Subject:
- XR_002959307.1
- Aligned Length:
- 3226
- Identities:
- 477
- Gaps:
- 2729
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGCGGGTGCGGGGTTGGGCCTGCGCATCGGGTGAGACGCTGGCTGCTTGCGGCTAGTGGATGGTAATTGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCTCGCGCTAGCAGGAAGGTAGTGTGGTGTGACTAACGGGCACACCTGTTGTCCTTAACTGACTTTCCGGGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCAGCACTTCTTCAGAAGTGTTCCTTTTCCCTCCCAGCAAATATGGAAGACTGACTATCCTGATATTCCCAGA 222
Query 1 --------------------------------------ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTT 36
||||||||||||||||||||||||||||||||||||
Sbjct 223 CATTCTTTGCTGTGATTTCTGCTCTGTTAAAAGCGAAAATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTT 296
Query 37 TCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGTAAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGC 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGTAAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGC 370
Query 111 CACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTGATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTGATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCA 444
Query 185 AGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTACACCTCAAAAATAAATAGTCATGAAGATCTTGAAAAT 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTACACCTCAAAAATAAATAGTCATGAAGATCTTGAAAAT 518
Query 259 TTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTCAATTTGTTGTATAGCTGAGGTTTTAATTACAACAAG 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTCAATTTGTTGTATAGCTGAGGTTTTAATTACAACAAG 592
Query 333 AACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAGATGGCAGTGGCCACATACTTTCTCAGAAACCTTCAC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAGATGGCAGTGGCCACATACTTTCTCAGAAACCTTCAC 666
Query 407 ATCTTGGTCAAG-----------------------------------------GTAAGAAAGTAGCTT------ 433
|||||||||||| |||||||||.||.||
Sbjct 667 ATCTTGGTCAAGGTACAACTGTAACTGCTTTAAGATTATTTAAGAATCTACCTGTAAGAAAGCAGTTTTACTCA 740
Query 434 ------------TGTA----------TACAAACAT-----------TCTTTACCTTT------------TCTGT 462
|||| .|.|||.|| ||.|.|.|||| .|||.
Sbjct 741 ACTGCAAAAAAATGTAAAGATGAAATAAAAAAGATCCAAGATCTCCTCATGAGCTTTGGTATCCTTAAACCTGA 814
Query 463 CTTA---ATTG--TTGGTTTAAAAAAAAAAAGTTACTCGG---------------------------------- 497
|||| |||| ||.||..|.||.||...|||||.|.||
Sbjct 815 CTTAAGGATTGTCTTTGTACATAACAAGGCAGTTATTTGGCAGAAAAGCAGAGTATCAGATCACAAGATGGCTC 888
Query 498 -------------------------------------------------------------------------- 497
Sbjct 889 TCATGTCAGTTCTGGGGACTGCTGTTATGAACAATATGGAATCCTTTCAGTACCACTCTGAAGAATCTCAGATT 962
Query 498 -------------------------------------------------------------------------- 497
Sbjct 963 TATCTCAGTGGATTTCTTCCAAAGTGTGATGCAGACCACTCTTTCACTAGTCTTTCAACACCAGAAAGAAGTTT 1036
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1037 CATCTTCATAAACAGTCGACCAGTACATCAAAAAGATATCTTAAAGTTAATCCGACATCATTACAATCTGAAAT 1110
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1111 GCCTAAAGGAATCTACTCGTTTGTATCCTGTTTTCTTTCTGAAAATCGATGTTCCTACAGCTGATGTTGATGTA 1184
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1185 AATTTAACACCAGATAAAAGCCAAGTATTATTACAAAATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTGAT 1258
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1259 GACGACTTGTTATGGACCATTACCTAGTACAAATTCTTATGAAAATAATAAAACAGATGTTTCCGCAGCTGACA 1332
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1333 TCGTTCTTAGTAAAACAGCAGAAACAGATGTGCTTTTTAATAAAGTGGAATCATCTGGAAAGAATTATTCAAAT 1406
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1407 GTTGATACTTCAGTCATTCCATTCCAAAATGATATGCATAATGATGAATCTGGAAAAAACACTGATGATTGTTT 1480
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1481 AAATCACCAGATAAGTATTGGTGACTTTGGTTATGGTCATTGTAGTAGTGAAATTTCTAACATTGATAAAAACA 1554
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1555 CTAAGAATGCATTTCAGGACATTTCAATGAGTAATGTATCATGGGAGAACTCTCAGACGGAATATAGTAAAACT 1628
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1629 TGTTTTATAAGTTCCGTTAAGCACACCCAGTCAGAAAATGGCAATAAAGACCATATAGATGAGAGTGGGGAAAA 1702
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1703 TGAGGAAGAAGCAGGTCTTGAAAACTCTTCGGAAATTTCTGCAGATGAGTGGAGCAGGGGAAATATACTTAAAA 1776
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1777 ATTCAGTGGGAGAGAATATTGAACCTGTGAAAATTTTAGTGCCTGAAAAAAGTTTACCATGTAAAGTAAGTAAT 1850
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1851 AATAATTATCCAATCCCTGAACAAATGAATCTTAATGAAGATTCATGTAACAAAAAATCAAATGTAATAGATAA 1924
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1925 TAAATCTGGAAAAGTTACAGCTTATGATTTACTTAGCAATCGAGTAATCAAGAAACCCATGTCAGCAAGTGCTC 1998
Query 498 -------------------------------------------------------------------------- 497
Sbjct 1999 TTTTTGTTCAAGATCATCGTCCTCAGTTTCTCATAGAAAATCCTAAGACTAGTTTAGAGGATGCAACACTACAA 2072
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2073 ATTGAAGAACTGTGGAAGACATTGAGTGAAGAGGAAAAACTGAAATATGAAGAGAAGGCTACTAAAGACTTGGA 2146
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2147 ACGATACAATAGTCAAATGAAGAGAGCCATTGAACAGGAGTCACAAATGTCACTAAAAGATGGCAGAAAAAAGA 2220
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2221 TAAAACCCACCAGCGCATGGAATTTGGCCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCAAAACTT 2294
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2295 GATGAACTCCTTCAGTCCCAAATTGAAAAAAGAAGGAGTCAAAATATTAAAATGGTACAGATCCCCTTTTCTAT 2368
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2369 GAAAAACTTAAAAATAAATTTTAAGAAACAAAACAAAGTTGACTTAGAAGAGAAGGATGAACCTTGCTTGATCC 2442
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2443 ACAATCTCAGGTTTCCTGATGCATGGCTAATGACATCCAAAACAGAGGTAATGTTATTAAATCCATATAGAGTA 2516
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2517 GAAGAAGCCCTGCTATTTAAAAGACTTCTTGAGAATCATAAACTTCCTGCAGAGCCACTGGAAAAGCCAATTAT 2590
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2591 GTTAACAGAGAGACGTTTTATATAAAATGACAGCAGATGACCAAAGATACAGTGGATCAACTTACCTGTCTGAT 2664
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2665 CCTCGTCTTACAGCGAATGGTTTCAAGATAAAATTGATACCAGGAGTTTCAATTACTGAAAATTACTTGGAAAT 2738
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2739 AGAAGGAATGGCTAATTGTCTCCCATTCTATGGAGTAGCAGATTTAAAAGAAATTCTTAATGCTATATTAAACA 2812
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2813 GAAATGCAAAGGAAGTTTATGAATGTAGACCTCGCAAAGTGATAAGTTATTTAGAGGGAGAAGCAGTGCGTCTA 2886
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2887 TCCAGACAATTACCCATGTACTTATCAAAAGAGGACATCCAAGACATTATCTACAGAATGAAGCACCAGTTTGG 2960
Query 498 -------------------------------------------------------------------------- 497
Sbjct 2961 AAATGAAATTAAAGAGTGTGTTCATGGTCGCCCATTTTTTCATCATTTAACCTATCTTCCAGAAACTACATGAT 3034
Query 498 -------------------------------------------------------------------------- 497
Sbjct 3035 TAAATATGTTTAAGAAGATTAGTTACCATTGAAATTGGTTCTGTCATAAAACAGCATGAGTCTGGTTTTAAATT 3108
Query 498 -------------------------------------------------------------------------- 497
Sbjct 3109 ATCTTTGTATTATGTGTCACATGGTTATTTTTTAAATGAGGATTCACTGACTTGTTTTTATATTGAAAAAAGTT 3182
Query 498 -------------------------------------------- 497
Sbjct 3183 CCACGTATTGTAGAAAACGTAAATAAACTAATATAGACTATTCA 3226
