Nucleotide Global Alignment
Description
- Query:
- TRCN0000472764
- Subject:
- XR_245540.4
- Aligned Length:
- 2639
- Identities:
- 1138
- Gaps:
- 1499
Alignment
Query 1 -----------------------------------------ATGCGGTCCCGGGTTCTGTGGGGCGCTGCCCGG 33
|||||||||||||||||||||||||||||||||
Sbjct 1 AACTTCCGGTTCCGGTCAGGGTCCGCGATCTCGGACTAAGGATGCGGTCCCGGGTTCTGTGGGGCGCTGCCCGG 74
Query 34 TGGCTCTGGCCCCGCCGGGCCGTTGGCCCAGCCCGCCGGCCCCTGAGCTCCGGTAGCCCGCCGCTGGAGGAGCT 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGCTCTGGCCCCGCCGGGCCGTTGGCCCAGCCCGCCGGCCCCTGAGCTCCGGTAGCCCGCCGCTGGAGGAGCT 148
Query 108 GTTCGCCCGGGGCGGGCCCTTGCGGACCTTCCTCGAGCGCCAGGCGGGGTCTGAAGCCCATTTGAAGGTCAGGA 181
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTTCACCCGGGGCGGGCCCTTGCGGACCTTCCTCGAGCGCCAGGCGGGGTCTGAAGCCCATTTGAAGGTCAGGA 222
Query 182 GGCCCGAGTTGCTGGCGGTGATCAAACTGCTGAACGAGAAGGAGCAGGAGCTGCGGGAGACTGAGCACTTGCTG 255
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 223 GGCCCGAGTTGCTGGCGGTGATCAAACTGCTGAACGAGAAGGAGCGGGAGCTGCGGGAGACTGAGCACTTGCTG 296
Query 256 CACGATGAGAATGAAGATTTAAGGAAACTTGCAGAGAATGAAATCACTTTGTGTCAAAAAGAAATAACTCAGCT 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CACGATGAGAATGAAGATTTAAGGAAACTTGCAGAGAATGAAATCACTTTGTGTCAAAAAGAAATAACTCAGCT 370
Query 330 GAAGCATCAGATTATCTTACTTTTGGTTCCCTCAGAAGAAACAGATGAAAATGATTTGATCCTGGAAGTAACTG 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAAGCATCAGATTATCTTACTTTTGGTTCCCTCAGAAGAAACAGATGAAAATGATTTGATCCTGGAAGTAACTG 444
Query 404 CAGGAGTTGGAGGTCAGGAGGCAATGTTGTTTACATCAGAGATATTTGATATGTATCAGCAATATGCTGCATTT 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGGAGTTGGAGGTCAGGAGGCAATGTTGTTTACATCAGAGATATTTGATATGTATCAGCAATATGCTGCATTT 518
Query 478 AAAAGATGGCATTTTGAAACCCTGGAATATTTTCCAAGTGAACTAGGTGGCCTTAGACATGCATCTGCCAGCAT 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAAAGATGGCATTTTGAAACCCTGGAATATTTTCCAAGTGAACTAGGTGGCCTTAGACATGCATCTGCCAGCAT 592
Query 552 TGGGGGTTCAGAAGCCTATAGGCACATGAAATTTGAAGGAGGTGTTCACAGAGTACAAAGAGTGCCAAAGACAG 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGGGGGTTCAGAAGCCTATAGGCACATGAAATTTGAAGGAGGTGTTCACAGAGTACAAAGAGTGCCAAAGACAG 666
Query 626 AAAAGCAAGGCCGCGTCCATACTAGCACCATGACTGTAGCAATATTACCCCAGCCTACTGAGATTAATCTGGTG 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAAAGCAAGGCCGCGTCCATACTAGCACCATGACTGTAGCAATATTACCCCAGCCTACTGAGATTAATCTGGTG 740
Query 700 ATTAATCCGAAAGATTTGAGAATTGACACTAAGCGAGCCAGTGGAGCTGGGGGGCAGCATGTAAATACCACGGA 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTAATCCGAAAGATTTGAGAATTGACACTAAGCGAGCCAGTGGAGCTGGGGGGCAGCATGTAAATACCACGGA 814
Query 774 CAGTGCTGTCCGGATAGTTCATCTTCCAA--------------------------------------------- 802
|||||||||||||||||||||||||||||
Sbjct 815 CAGTGCTGTCCGGATAGTTCATCTTCCAACAGGAAGAAGAAAAAGGATGAGGAGGAAAAGTATTCCTTGATAAT 888
Query 803 --------------------------------------------------CAGGTGTTGTTTCTGAATGTCAAC 826
||||||||||||||||||||||||
Sbjct 889 AAGTAAAGAAGATTTTTTTATTAAAACTTTTTAATTCTCGTAACACTATTCAGGTGTTGTTTCTGAATGTCAAC 962
Query 827 AAGAGAGATCTCAGCTGAAAAATAAAGAGCTGGCTATGACAAAGTTACGTGCAAAACTGTACAGCATGCATCTA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGAGAGATCTCAGCTGAAAAATAAAGAGCTGGCTATGACAAAGTTACGTGCAAAACTGTACAGCATGCATCTA 1036
Query 901 GAAGAAGAAATAAATAAAAGACAGAATGCTAGAAAAATTCAGATTGGAAGTAAAGGAAGATCAGAGAAAATAAG 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAAGAAGAAATAAATAAAAGACAGAATGCTAGAAAAATTCAGATTGGAAGTAAAGGAAGATCAGAGAAAATAAG 1110
Query 975 AACATATAATTTTCCACAGAACCGGGTCACAGATCACAGAATAAACAAGACGCTGCATGATCTTGAAACTTTTA 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AACATATAATTTTCCACAGAACCGGGTCACAGATCACAGAATAAACAAGACGCTGCATGATCTTGAAACTTTTA 1184
Query 1049 TGCAAGGAGATTATCTACTGGATGAACTTGTACAGTCATTGAAGGAATACGCCGATTATGAATCTTTAGTAGAA 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGCAAGGAGATTATCTACTGGATGAACTTGTACAGTCATTGAAGGAATACGCCGATTATGAATCTTTAGTAGAA 1258
Query 1123 ATTATTTCCCAAAAAGTT-------------------------------------------------------- 1140
||||||||||||||||||
Sbjct 1259 ATTATTTCCCAAAAAGTTTAAGTTGATTTGTTATTTATAGACTTTCGTAGCTTAGAAAAATTCTACAGTACATC 1332
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1333 CACATAGGGTGAAAGTACCCTTACTCTCTTGAAAAACGTTGAGTTAACACAGTTGGAGGTAATATGCATATTCT 1406
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1407 GAAGTCATAGATAATTTACACAGATCTCTCTCAATGCATTAGCAAAAATCATACAATATACAGATGGTCCTCGA 1480
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1481 TTTACATTGTGGTTAATTCCCAATAAACCCATCATAAGTTAAAAATGCATATAACGTTAGCAACACAGCAGTCT 1554
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1555 CCTAATTAATGACAGCTTGACTTAACAATTTTCCAACTTTACCATGGTGTGAAAGAGGTATGATTCCTAAGCCC 1628
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1629 TAAGGAGCTCCTCAGCTTGAAATGGGGCTGCATCCCTATAAACCCATCATAAAGTCAAAAAATCCTAAAACATA 1702
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1703 AGTTGGTGACCATCTGTAATCATGATGTGGTGGTAAATCTTGGACGCTACCTTACAATAACTAGACAAAGGAAA 1776
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1777 ATCATCCTTTGTCCTGTTCTGTGTAAATATTTAATGAATGATCAAAACTTCAGTTTAAATATTATGAAAAACTT 1850
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1851 TAAACATAAAGTAGTAGAAATAAGACAGTAAATACTGTATCCTAATATCCAGTCAGGATACAGAAACCATACCA 1924
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1925 TTAACTTGAACAGGGATAATTTTAATATAAAAACTGTTAACTGATAATGGTATTAACTTTTAAGAGGGATGAAA 1998
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1999 GAGAGCTATGATGTCCTAGGACTGAGAGTACCCCAGGAAAGAATACCCTTGAAAGGGTCTCCCCTTCCCCATGG 2072
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2073 TGAAGTCAGGCCTAATGGAGAGAGTGGCTACAGCCTACTCAGTGATTGGGAAATTCCCTGTCTTGCCCTGGGCC 2146
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2147 AGAGCTGGTGTACCGCTGGTGGATCAGGTCTTACAAGCAAAGAACCTCACACTCCCAACTGGTAAGCCAGAAGC 2220
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2221 CTCTTGCTAGGGTGTGAGCAAAACTTGGACAGGAACTCTCAGTAGATGTTTGTGTTTGTCAAGATTCTCCAGAC 2294
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2295 AAACTTCCTTAAAAGGATTGGCTTGTGTTGTTATTATTAAGTCTAACAAGTCCAAAAGCTGGAGTGTGAGGCAG 2368
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2369 GAGGCTGGAAACCCAGGAAAGCTGATGGTGCAAGGTCCAGTCCAAAGGTATCTGTTGGAGGATTCTCTTGTTCT 2442
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2443 GGGAAGAGGACGGTCTTTTTTTCTCTTCAGACCTTCACCTGACTGGATCAAGCCCACTAACATCGAGGAGGACA 2516
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2517 GTCTGCATTACTCAGAGTTCACTGATTGATTTAAATGTCAATCTCATATAAAACACCCTCACAGAAACACCTAG 2590
Query 1141 ------------------------------------------------- 1140
Sbjct 2591 AATAATGTTTGACCTTATAATTGGAAAATCAGAGCAAAAGTTAAATCTC 2639
