Nucleotide Global Alignment
Description
- Query:
- TRCN0000472805
- Subject:
- XM_011516424.2
- Aligned Length:
- 2244
- Identities:
- 632
- Gaps:
- 1602
Alignment
Query 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AAAATCTGTTGAACAGAGAGAAATCAAGGGGCTAAGGAATAAACCAAAGAAAACAGCACATGTGAAACCAGACC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AGAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAACATCAAAGGTCAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCACTTCTAGCCCAC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTGCATTGCCAGATT 444
|||||||||||||||||||||||||||||||||
Sbjct 1 -----------------------------------------ATGCTGCTCCTGGGAACTGTGCATTGCCAGATT 33
Query 445 GTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34 GTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCCA 107
Query 519 TTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAGTTCAGAACCACG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 108 TTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAGTTCAGAACCACG 181
Query 593 GTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTTTTATCAGGATCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 182 GTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTTTTATCAGGATCA 255
Query 667 AAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGATGGGAAGAAGAC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 256 AAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGATGGGAAGAAGAC 329
Query 741 TGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAGAAGAGACAGCCT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 330 TGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAGAAGAGACAGCCT 403
Query 815 GGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTCTCTGATGAAGTC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 404 GGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTCTCTGATGAAGTC 477
Query 889 TCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGAAGGTGTTCTTCG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 TCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGAAGGTGTTCTTCG 551
Query 963 GAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGG-------TATA-----TACT--TTG----- 1017
|||||||||||||||||||||||||||||||||||||||||||| ||.| |||| |||
Sbjct 552 GAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGACGCCCCTAAATCGGGTACTAGTTGCAGCT 625
Query 1018 -----TCCTTAAGTGTATACATACA-----------------------TATC------------TATTTTAT-- 1049
|..|.|||| |.||.||| .||| |.|.||||
Sbjct 626 CTCGCTGTTCAAGT---TCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAAGATGTGTTATGG 696
Query 1050 ------ATGTTAC------------------------------------------------------------- 1056
.||||||
Sbjct 697 GAAGACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAATCATCAGATTAA 770
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 771 TCCATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCCATAGTTCCCACC 844
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 845 CAGGATTAGAAAAAATAAGTGCTATAGTATGGGAAGGTAATGATTGTAAGAAAGCAGACATGTCTGTACTTGAA 918
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 919 ATCAGTGGAATGATAATGAACAGAGTGAACAGCCATATACCAGGAATAGGATACCAGATTTTTGGAAATGCAGT 992
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 993 CTCTCTCATACTGGGTTTAACTCCATTTGTTTTCCGACTTTCTCAAGCTACAGACTTGGAACAACTCACAGCAC 1066
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1067 ATTCTGCTTCAGAACTTTATGTGATTGCATTTGGTTCTAATGAAGATGTCATAGTTCTTTCTATGGTTATAATA 1140
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1141 AGTTTTGTGGTTCGCGTGTCTCTTGTGTGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAGAACTTATAAACA 1214
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1215 GCGATTACTTTTTGCAAAACTCTTTGGACATTTAACATCTGCAAGGAGGGCTCGAAAATCTGAGGTTCCTCATT 1288
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1289 TCCGGTTGAAGAAAGTACAGAATATAAAAATGTGGCTATCTCTCCGTTCCTATCTTAAGCGTCGAGGTCCTCAG 1362
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1363 CGATCAGTTGATGTAATAGTTTCATCTGCTTTCTTATTGACTATCTCAGTTGTATTTATCTGTTGTGCCCAGCT 1436
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1437 ACTTCATGTACACGAGATCTTCCTTGATTGTCACTACAATTGGGAATTGGTAATCTGGTGCATCTCGTTAACAC 1510
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1511 TTTTTCTCCTAAGATTTGTTACCCTTGGATCAGAAACAAGTAAAAAATATAGTAATACCTCAATATTACTTACT 1584
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1585 GAACAGATAAACCTCTACTTGAAAATGGAGAAAAAACCTAACAAAAAGGAGGAACTGACACTAGTGAATAATGT 1658
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1659 TTTAAAACTGGCTACTAAACTGCTAAAGGAGTTGGACAGTCCTTTTAGATTATATGGGCTTACAATGAATCCGC 1732
Query 1057 -------------------------------------------------------------------------- 1056
Sbjct 1733 TGCTTTATAACATCACCCAGGTTGTTATCCTGTCAGCTGTTTCTGGTGTTATCAGTGACTTGCTTGGATTTAAT 1806
Query 1057 ------------------------ 1056
Sbjct 1807 TTAAAGCTATGGAAGATTAAGTCA 1830
