Nucleotide Global Alignment

Description

Query:
TRCN0000472816
Subject:
NM_001365211.2
Aligned Length:
1529
Identities:
682
Gaps:
790

Alignment

Query    1  ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA  74

Query   75  GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA  148

Query  149  GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA  222

Query  223  CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAA----CACAGAGGGTGCGACA  292
            ||||||||||||||||||||||||||||||||||||.||.|    |||||.|||    |..|..||.||.||.|
Sbjct  223  CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGACTTT----AAGAAAGAAAGGCCTTAATGGTTGTGAGA  292

Query  293  GCCCAGACCCTGA----TACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGA  362
            ||||.||..||||    |||||    ||.||..|.|||||...|.||.||.|.||..|..|||.|.|||||.||
Sbjct  293  GCCCTGATGCTGACGATTACTT----TGAGCACAGTCCACTCTCGGAGGACAGATTCAGCAAACTAAATGAAGA  362

Query  363  -----ATTTGAT----AATATGATGCGGAATCATAAAATCGCACCTGGTCTGCCACCTCAGAACTTTTCAATGT  427
                 ||||.||    || |.||.|              |.|.|||||||||||||||||||||||||||||||
Sbjct  363  TAGTGATTTTATTTTCAA-ACGAGG--------------CCCTCCTGGTCTGCCACCTCAGAACTTTTCAATGT  421

Query  428  CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT  501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  422  CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT  495

Query  502  TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC  575
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  496  TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC  569

Query  576  TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC  649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  570  TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC  643

Query  650  CAAATGGAGCTGGAAGCAGTCCAGTGGG-GAATGGATTTGTAAACTCAAGA----GCTTCTCCAAATTTGA---  715
            |||||||||||||||||||||||||||| ..|||.|.|..|||    ||||    ||.||      .||||   
Sbjct  644  CAAATGGAGCTGGAAGCAGTCCAGTGGGCCCATGTACTGCTAA----AAGAAGAGGCATC------CTTGAGAC  707

Query  716  --TTGGAGCTACTGGTGCAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTA  787
              ||..||| ||||    ||..|.||.|||.||.|         |||||.||                      
Sbjct  708  TTTTAAAGC-ACTG----AACGAACTCAGGAAAGG---------CAAAGACT----------------------  745

Query  788  ATCTTGGAATGAACAGTAGGAAACCAGA-----TCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGC  856
             ||||        .|.||.|||||||.|     ||                                       
Sbjct  746  -TCTT--------AAATAAGAAACCAAAGAAAGTC---------------------------------------  771

Query  857  CTCCACTAAATACCCAAAGGATCAGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACA  930
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query  931  ACCCCAAGCTTGCCTCCGCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGAC  1004
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1005  CAGCGCTGACCTGTCAGCCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGC  1078
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1079  AGCAGCACCACCTAGGACAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTA  1152
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1153  TCCATTAATACCAACCAAAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATC  1226
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1227  GGGCTTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCC  1300
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1301  CGCAGCCCCAGCCCCGACAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGAT  1374
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1375  GGCAGTGATCGGGAGGATCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGA  1448
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1449  CAGAGAAAGCCCTTCTGTAAAGCGAATGAGGATGGACGCGTGGGTTACC  1497
                                                             
Sbjct  772  -------------------------------------------------  771