Nucleotide Global Alignment
Description
- Query:
- TRCN0000472983
- Subject:
- XM_017003753.1
- Aligned Length:
- 5846
- Identities:
- 406
- Gaps:
- 5416
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGACGGCAATATGGAGGCGATCTTACATTTCTTTGATTTCATCTGAACGTCCAGTTCACAATTGGAGAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAAGAGTGTTCAGAAGAAACAAGCAGAGAGTAAAAGCCAGATAAAGCTCCATACTCAGAGTGCTCCCTTTGGAC 148
Query 1 -----------------ATGCTCACCCAGGCTTCAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACCACACC 57
|||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGTGTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACCACACC 222
Query 58 GTGAACTCTGGTGGATCCTGCCTGAGTGCCAGCACAGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGCCAT 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTGAACTCTGGTGGATCCTGCCTGAGTGCCAGCACAGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGCCAT 296
Query 132 GAGTGCCTGCAGCACCATCAGCGCCCAGCCCGCAAGCTCCATGGACACTCAGATGCACTCCCCAAAGAAGCAGG 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGTGCCTGCAGCACCATCAGCGCCCAGCCCGCAAGCTCCATGGACACTCAGATGCACTCCCCAAAGAAGCAGG 370
Query 206 AGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGGTGGCTGAGGAGCTGCATTGGAAAGGCTGGGAGCTAGGA 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGGTGGCTGAGGAGCTGCATTGGAAAGGCTGGGAGCTAGGA 444
Query 280 AAGGAGACCACAAGGAATCTGGTTCTGAAAAATCGATCCTTGAAACTCCAGAAGATGAAGCACAGGTACCAGTA 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||..||
Sbjct 445 AAGGAGACCACAAGGAATCTGGTTCTGAAAAATCGATCCTTGAAACTCCAGAAGATGAAGTACAGGCCCC---- 514
Query 354 TAAGGGATCAAGGACCCAG----------------TGCCACAGC-------CTTGAGCCCCGAAAGCAGGCTCT 404
|.|.||||.|| |.||.|||| |.|||||| |||||
Sbjct 515 --------CCAAGACCAAGTTCTTCTTCACGGTCATCCCTCAGCCCATCTTCCTGAGCC-------CAGGC--- 570
Query 405 CTTCAAAACAAAACAAAACAAACAAAAAAAACCTTTA------ACAT---------GCCATATAAAAGCCAGTG 463
|.||||.|.| .||| ||| |.|..|.||.|..|
Sbjct 571 ---------------------------ATAACCCTCACGCTCCCCATCGTCTTCCGGCC-TCTGGAGGCGAAGG 616
Query 464 AGTGTTTAAAATACATGCA---------GTATGAA--------------------------------------- 489
|| ||||||.| ||.|||.
Sbjct 617 AG---------TACATGGACCAGCTGTGGTTTGAGAAAGCGGAGGGGATGTTCTGTGTCGGCCTACGGGCCACC 681
Query 490 -------------------------------------------------------------------------- 489
Sbjct 682 CTGCCCTGCCACAGGCTGATCTGCCGCCCACCATCCCTGCAGCTGCCCATGTGTGCTGTGGGAGATACGACTGA 755
Query 490 -------------------------------------------------------------------------- 489
Sbjct 756 GGCCTTTTTCTGCCTGGATAATGTGGGGGACCTGCCCACCTTCTTCACCTGGGAGTTCTCCAGCCCATTCCAGA 829
Query 490 -------------------------------------------------------------------------- 489
Sbjct 830 TGCTGCCCGCCACGGGGCTCCTGGAGCCAGGCCAGGCCTCTCAGATCAAGGTGACCTTTCAGCCCCTTACAGCC 903
Query 490 -------------------------------------------------------------------------- 489
Sbjct 904 GTCATCTACGAGGTGCAGGCCACGTGCTGGTACGGGGCGGGCAGCCGGCAGAGGAGCAGCATCCAGCTGCAGGC 977
Query 490 -------------------------------------------------------------------------- 489
Sbjct 978 TGTGGCCAAGTGCGCCCAGCTGCTGGTGAGCATAAAGCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTTCC 1051
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1052 AGAAGCTGTTGTACTTTGGCTCTGTTGCTGTGGGCTGCACCTCGGAGAGGCAGATCAGGCTACACAACCCGTCG 1125
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1126 GCGGTAAATGCCCCCTTCAGGATTGAAATTTCCCCGGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCCCAC 1199
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1200 GGCCCATGGCATCGTGCTTCCGGGAGAGAAGAAATGTGTGTCGGTGTTCTTCCACCCCAAGACTCTGGACACCA 1273
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1274 GAACTGTGGACTACTGCTCCATCATGCCTTCTGGCTGTGCCTCCAAGACCCTGCTTAAAGTCGTTGGTTTCTGT 1347
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1348 AGAGGCCCTGCTGTGTCCCTGCAGCACTACTGTGTCAACTTCAGCTGGGTCAACCTTGGGGAGCGCTCCGAGCA 1421
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1422 GCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGAGTGTCT 1495
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1496 TTACCATCAGGCCTGCCTTTGGGACGCTGGTGGGCAAGGCCCGTATGACCCTGCACTGTGCCTTCCAGCCCACT 1569
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1570 CACCCCATCATCTGCTTTCGGCGTGTGGCCTGTCTCATCCACCACCAGGACCCACTGTTCCTGGACCTGATGGG 1643
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1644 GACCTGCCACTCGGACAGCACCAAGCCAGCCATCCTGAAGCCTCAGCACCTCACCTGGTACCGCACACACCTGG 1717
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1718 CCCGGGGCCTGACGCTCTACCCCCCTGACATCCTGGATGCCATGCTGAAGGAGAAGAAGCTGGCACAGGACCAG 1791
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1792 AACGGGGCTCTCATGATTCCCATCCAGGATCTGGAGGACATGCCGGCCCCGCAGTACCCTTATATCCCCCCCAT 1865
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1866 GACCGAGTTCTTCTTCGACGGCACCAGCGACATAACCATCTTCCCCCCGCCCATCAGTGTAGAGCCTGTCGAGG 1939
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1940 TAGACTTCGGTGCCTGCCCAGGGCCTGAGGCCCCCAACCCTGTACCCCTGTGCCTGATGAACCACACCAAGGGC 2013
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2014 AAGATCATGGTGGTCTGGACGCGAAGGTCTGACTGCCCCTTCTGGGTGACTCCAGAGAGCTGCGACGTGCCCCC 2087
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2088 ACTCAAGTCCATGGCCATGCGCCTGCACTTCCAGCCGCCTCACCCCAACTGCCTTTACACGGTGGAGCTCGAAG 2161
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2162 CCTTCGCCATCTATAAGGTCCTGCAGAGCTACAGTAATATTGAGGAGGACTGCACCATGTGCCCATCCTGGTGC 2235
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2236 CTGACGGTGCGGGCACGAGGCCACAGCTATTTCGCTGGCTTTGAGCACCACATCCCCCAGTATTCCCTAGATGT 2309
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2310 CCCCAAGCTATTTCCAGCAGTGTCCTCCGGTGAGCCCACCTACCGCAGCCTGCTCCTGGTCAACAAAGACTGCA 2383
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2384 AGCTGCTGACCTTCAGCCTGGCCCCCCAGAGAGGCTCAGACGTCATCCTTCGGCCCACTTCGGGCCTTGTGGCA 2457
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2458 CCCGGGGCCCACCAGATCATCCTCATCTGCACCTACCCTGAGGGCAGCTCCTGGAAGCAGCACACTTTCTATCT 2531
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2532 GCAGTGCAATGCTTCCCCCCAGTATCTCAAGGAGGTGAGCATGTACAGCCGGGAGGAGCCACTGCAGCTGAAGC 2605
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2606 TGGACACCCACAAAAGCCTCTACTTCAAGCCCACCTGGGTGGGCTGCTCCTCCACCAGCCCCTTCACCTTCCGC 2679
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2680 AACCCCTCGCGTCTGCCCCTGCAGTTCGAGTGGAGGGTCTCTGAGCAGCATCGAAAGCTGCTGGCTGTCCAGCC 2753
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2754 CTCCAGGGGGCTAATCCAGCCCAACGAGAGACTTACGCTGACGTGGACCTTCAGCCCTTTGGAGGAGACCAAGT 2827
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2828 ACCTGTTCCAAGTGGGGATGTGGGTCTGGGAAGCCGGCCTGTCCCCAAATGCCAACCCCGCTGCCACCACCCAC 2901
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2902 TACATGCTCCGGCTGGTGGGCGTTGGGCTCACCAGCAGCCTCTCTGCAAAGGAAAAGGAGCTGGCCTTTGGGAA 2975
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2976 TGTGCTGGTGAACAGCAAGCAGTCCAGGTTCCTTGTCCTCCTGAATGACGGCAACTGCACCCTCTATTACCGCC 3049
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3050 TCTACCTGGAGCAGGGCAGCCCTGAGGCCGTTGACAACCACCCCCTCGCTCTGCAGCTGGACCGAACAGAGGGG 3123
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3124 AGCATGCCACCCCGGTCCCAGGACACCATCTGCCTGACTGCCTGTCCCAAGCAGCGGTCCCAGTACTCCTGGAC 3197
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3198 CATCACCTACTCTCTCCTTTCCCACAGAGATAACAAGGCTGGGGAGAAGCAGGAGCTGTGCTGCGTCTCCCTGG 3271
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3272 TGGCCGTGTACCCCTTGCTTTCCATCCTGGATGTCAGCTCCATGGGCAGTGCTGAGGGTATCACCCGGAAGCAC 3345
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3346 CTGTGGCGCCTCTTCTCTCTGGACCTGCTTAACAGTTACTTGGAGCGTGACCCCACCCCCTGTGAGCTCACCTA 3419
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3420 CAAGGTGCCCACCCGGCACAGCATGAGCCAGATCCCCCCCGTCCTCACCCCTTTAAGGCTTGACTTCAATTTCG 3493
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3494 GGGCCGCACCATTCAAGGCCCCACCTTCCGTGGTATTCCTGGCCCTGAAGAACAGCGGAGTGGTGTCCCTGGAC 3567
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3568 TGGGCCTTCCTCCTTCCAAGTGACCAGCGGATTGACGTGGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTCCAC 3641
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3642 TGAGCTCCACCAGATGCGCGTGCAGGACAATTGCCTCTTCTCCATCAGCCCCAAGGCTGGGAGCCTGAGTCCTG 3715
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3716 GGCAGGAGCAGATGGTGGAGTTAAAATACAGCCACCTGTTCATCGGTACTGATCACCTCCCAGTGCTCTTCAAG 3789
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3790 GTGTCCCATGGCCGGGAGATCCTGCTAAATTTCATAGGTGTGACAGTGAAGCCGGAGCAGAAGTATGTGCACTT 3863
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3864 CACCTCTACTACCCACCAGTTCATCCCCATTCCCATTGGTGACACGCTACCCCCACGGCAGATTTATGAGCTGT 3937
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3938 ATAATGGTGGCTCAGTGCCCGTGACATATGAGGTCCAGACCGATGTCCTGTCACAGGTTCAGGAAAAAAATTTT 4011
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4012 GATCACCCCATCTTTTGCTGCCTCAACCCCAAAGGGGAGATCCAGCCAGGCAGCACTGCCCGGGTCTTGTGGAT 4085
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4086 CTTCTCACCTATCGAGGCCAAGACCTACACGGTGGACGTGCCCATACACATCCTGGGATGGAACTCGGCCCTCA 4159
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4160 TCCACTTCCAGGGAGTGGGCTACAACCCCCATATGATGGGGGACACAGCCCCATTCCACAACATCTCCTCGTGG 4233
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4234 GACAACAGTTCCATACACTCTAGGCTGGTGGTGCCTGGACAGAATGTCTTCCTGTCCCAGTCTCATATTTCCCT 4307
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4308 GGGAAACATACCTGTGCAGAGCAAGTGCAGCCGCCTGCTCTTCCTCAACAACATCTCCAAGAACGAGGAAATTG 4381
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4382 CCTTCTCCTGGCAGCCAAGTCCTCTAGATTTTGGGGAGGTGTCTGTGAGTCCCATGATAGGGGTGGTGGCTCCT 4455
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4456 GAAGAGACGGTCCCATTTGTGGTGACCTTGAGGGCCTCTGTGCATGCCAGCTTCTACAGTGCAGACCTGGTATG 4529
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4530 CAAGCTGTACTCGCAGCAGCTCATGAGGCAGTATCACAAGGAGCTGCAGGAGTGGAAGGACGAGAAGGTGCGGC 4603
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4604 AGGAAGTGGAGTTCACCATCACCGACATGAAAGTGAAGAAGAGAACATGCTGCACAGCCTGTGAACCTGCGAGG 4677
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4678 AAGTACAAGACACTGCCTCCCATCAAGAACCAGCAGTCTGTCAGCCGGCCTGCCAGCTGGAAACTGCAGACCCC 4751
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4752 AAAGGAGGAGGTGTCCTGGCCCTGCCCCCAGCCACCCTCGCCAGGCATGCTCTGCCTGGGCCTTACTGCCCGAG 4825
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4826 CCCATGCCACCGACTACTTTCTGGCTAACTTCTTCTCAGAGTTTCCCTGCCACTTTTTGCACCGCATGGTGGCT 4899
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4900 TGCCCAGGCCACTCAGAATGTCATGGCTGCCACAGGGAGCTGCCAAAGAGGAAGGCCCCCAGGGAAGAGTCAGA 4973
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4974 GACTTCTGAGGAAAAATCCCCTAACAAGTGGGGCCCTGTTTCCAAGCAGAAGAAGCAGCTCCTGGTTGACATTC 5047
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5048 TCACCACAATAATCAGGGGCCTGCTGGAAGACAAGAACTTCCATGAGGCTGTGGACCAAAGCCTGGTGGAGCAG 5121
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5122 GTGCCGTACTTCCGCCAATTCTGGAATGAGCAGTCAACTAAGTTCATGGACCAGAAAAACAGCCTGTACTTAAT 5195
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5196 GCCAATCCTGCCTGTACCCTCCAGCAGCTGGGAGGATGGGAAGGGCAAGCAGCCGAAGGAAGACAGACCAGAGC 5269
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5270 ACTATCCAGGGTTGGGAAAGAAGGAAGAGGGGGAGGAGGAGAAGGGTGAAGAGGAAGAAGAAGAGTTGGAGGAG 5343
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5344 GAAGAGGAGGAAGAAGAGGAGACAGAAGAGGAGGAGTTGGGCAAGGAGGAGATAGAGGAGAAGGAGGAGGAGAG 5417
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5418 GGATGAGAAGGAAGAGAAAGTGAGCTGGGCGGGCATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCATGC 5491
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5492 AATGGCAGTGGCAACAGCAGCTGAATGTCATGGTGAAGGAGGAGCAAGAACAGGACGAGAAGGAGGCCATCAGA 5565
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5566 AGGCTCCCGGCCTTCGCCAACCTGCAGGAGGCGCTGCTGGAGAACATGATCCAGAACATCCTGGTGGAGGCGAG 5639
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5640 CCGCGGGGAGGTGGTACTCACCTCGCGGCCACGCGTCATCGCCCTGCCGCCGTTCTGCGTGCCCAGGAGTCTGA 5713
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5714 CCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCTTCCG 5787
