Nucleotide Global Alignment
Description
- Query:
- TRCN0000473036
- Subject:
- NR_024093.1
- Aligned Length:
- 3383
- Identities:
- 1535
- Gaps:
- 1709
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTTTCAGAGACTTTCATCCGGCAACGGACAGGGCCTTTTTTTTCTTAAAGGAGAAGCTGCAACTCAAATAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTACCACTTCTCCCCTCGAGAGCTGGCGGCGCTGGGGACAGAAAGGCCAGAGCAGGAAGGTGGGGGTCTGGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAGGCGGGATAACGTCCAGGCTACTTCTTAGGCTAGTAAGAACCCTTGAGGGGACAGCGGCGCCTCCGGGAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGTGCGCGCGCAGCCGGCAGGGGGGTGCGCGCGCGGCTGAGAACGGTGCGTTTTGTCCTCGCCTCCGCCCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCAGCCCTGCCCCTCCCACCGCCCCTAGCTTGAGCCGAACTCCAAAGTGGGGGGGGAGAAAGGTCACTTTGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTGTCGCGAGACGCAGCCGTTTAACGGTGAGAACGGGCGCGCGGGCAAGGAAACCTCGCGCTCTCCCTCGGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGTTTCCTGATTGGTTGGAGGAAGGGGTGGGGGAGGGCACCGAGTGCGCTGCTGCGTGTGAGACCGCGAGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGGGCCAGGGGGGCCGATCCTCCCCTCCGATTGGCCCGCTGCGTGTCCGTCCGGGTGCGCGCGTGCGCGCCGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGGCGGTCGCTGGCTTGAGTGGCAGGGGGCGGGTGGGGGGGGGCGCCCTCGGAACGGGCGGAGGGGCGGGGGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGAGGCGCTCCGGAGTGAGGGAGCCGGACGCTCCGGGAGCCGAGGGGGGCGGGGGGAGCTGCGCCGCGGGCG 740
Query 1 --------------------------------------------------ATGCCGGGGGAGACGGAAGAGCCG 24
|||||||||||||||||.||||||
Sbjct 741 CCGCCGCCTCCACCGCCTGGGACGCAGGGGTGGGGGACGGACGAGCCCCGATGCCGGGGGAGACGGAGGAGCCG 814
Query 25 AGACCCCCGGAGCAGCAGGACCAGGAAGGGGG------AGAGGCGGCCAAGGCGGCTCCGGAGGAGCCCCAACA 92
.||.|||||||||||||||||||||||||||| ||.|||||||.|.||||||.|||||||||.|
Sbjct 815 CGATCCCCGGAGCAGCAGGACCAGGAAGGGGGCCCAGCAGCGGCGGCCGACGCGGCTTCGGAGGAGCTC----- 883
Query 93 ACGGCCCCCTGAGGCGATCG----CGGCGGCGCCTGCAGGGACCACTAGCAGCCGCGTGCTGAGGGGAGGTCGG 162
||||||...|.|||| .|| |||||||||||||||.||||.|.|||||||||||||||||||||||||||
Sbjct 884 -CGGCCCGGCGCGGCG-GCGGCGCCGGCGGCGCCTGCAGAGACCGCGAGCAGCCGCGTGCTGAGGGGAGGTCGG 955
Query 163 GACCGAGGCCGGGCCGCTGCGGCCGCCGCCGCC------GCAGCTGTGTCCCGCCGGAGGAAGGCCGAGTATCC 230
|||||.||||||.|||||||||||||||||||| ||.|||||||||||||||||.||||||||||||||
Sbjct 956 GACCGCGGCCGGACCGCTGCGGCCGCCGCCGCCGCCGCTGCCGCTGTGTCCCGCCGGAGAAAGGCCGAGTATCC 1029
Query 231 CCGCCGGCGGAGGAGCAGCCCCAGCGCCAGGCCTCCCGACGTCCCCGGGCAGCAGCCCCAGGCCGCGAAGTCCC 304
|||||||||||||||||||||||||..||||||||||||||.|||.|||||.||||||..||||||||||.|||
Sbjct 1030 CCGCCGGCGGAGGAGCAGCCCCAGCAACAGGCCTCCCGACGGCCCAGGGCATCAGCCCGCGGCCGCGAAGCCCC 1103
Query 305 CGTCTCCAGTTCAGGGCAAGAAGAGTCCGCGACTCCTATGCATAGAAAAAGTAACAACTGATAAAGATCCCAAG 378
|||||||.|.||||||||||||||||||||||||||..||.|||||||||.|||||||||||||||||||||||
Sbjct 1104 CGTCTCCTGCTCAGGGCAAGAAGAGTCCGCGACTCCAGTGTATAGAAAAACTAACAACTGATAAAGATCCCAAG 1177
Query 379 GAAGAAAAAGAGGAAGAAGACGATTCTGCCCTCCCTCAGGAAGTTTCCATTGCTGCATCTAGACCTAGCCGGGG 452
| |||||.|||||||.|||||||.||||||||||||||||||||||.||.||.|||||.||||||||.|
Sbjct 1178 G------AAGAGAAAGAAGATGATTCTGTCCTCCCTCAGGAAGTTTCCATTACTACAACTAGAGCTAGCCGGAG 1245
Query 453 CTGGC---GTAGTAGTAGGACATCTGTTTCTCGCCATCGTGATACAGAGAACACCCGAAGCTCTCGGTCCAAGA 523
||||| |||||||.|||||.|||.|.|||||||.|||.||.|..|||||.||.||.||||||.|||||||||
Sbjct 1246 CTGGCGCAGTAGTAGCAGGACCTCTATCTCTCGCCTTCGAGACAGTGAGAATACTCGGAGCTCTAGGTCCAAGA 1319
Query 524 CCGGTTCATTGCAGCTCATTTGCAAGTCAGAACCAAATACAGACCAACTTGATTATGATGTTGGAGAAGAGCAT 597
|.||.||.|||||.|||.|.||||||.|||||||||.|||.||.||||||||||||||||||..||||||.|||
Sbjct 1320 CTGGCTCCTTGCAACTCGTCTGCAAGACAGAACCAATTACTGATCAACTTGATTATGATGTTCCAGAAGAACAT 1393
Query 598 CAGTCTCCAGGTGGCAT---TAGTGAAGAGGAAGAGGAGGAGGAAGAAGAGATGTTAATCAGTGAAGAGGAGAT 668
||||||||.|||||||| ||||||.|||||||||||||||||||||||.||||||||||||||||||||.||
Sbjct 1394 CAGTCTCCCGGTGGCATTAGTAGTGATGAGGAAGAGGAGGAGGAAGAAGAAATGTTAATCAGTGAAGAGGAAAT 1467
Query 669 ACCATTCAAAGATGATCCAAGAGATGAGACCTACAAACCCCACTTAGAAAGGGAAACCCCAAAGCCACGGAGAA 742
|||||||||||||||.||||||||||||||.|||||.||||||.|.||||||||||||||||||||||||||||
Sbjct 1468 ACCATTCAAAGATGACCCAAGAGATGAGACTTACAAGCCCCACCTTGAAAGGGAAACCCCAAAGCCACGGAGAA 1541
Query 743 AATCAGGGAAGGTAAAAGAAGAGAAGGAGAAGAAGGAAATTAAAGTGGAAGTAGAGGTGGAGGTGAAAGAAGAG 816
|||||||||||||.|||||||||||.||.|||||.||||||||||||||||||||.||.||||||||||||||.
Sbjct 1542 AATCAGGGAAGGTGAAAGAAGAGAAAGAAAAGAAAGAAATTAAAGTGGAAGTAGAAGTAGAGGTGAAAGAAGAA 1615
Query 817 GAGAATGAAATTAGAGAGGATGAGGAACCTCCAAGGAAGAGAGGAAGAAGACGAAAAGATGACAAAAGTCCACG 890
||||||||||||||.||.||||||||.|||||.|||||||||||.|||||.||||||||||||||||||||.||
Sbjct 1616 GAGAATGAAATTAGGGAAGATGAGGAGCCTCCCAGGAAGAGAGGGAGAAGGCGAAAAGATGACAAAAGTCCGCG 1689
Query 891 TTTACCCAAAAGGAGAAAAAAGCCTCCAATCCAGTATGTCCGTTGTGAGATGGAAGGATGTGGAACTGTCCTTG 964
.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 1690 GTTACCCAAAAGGAGAAAAAAGCCTCCAATCCAATATGTCCGTTGTGAGATGGAAGGATGTGGAACTGTTCTTG 1763
Query 965 CCCATCCTCGCTATTTGCAGCACCACATTAAATACCAGCATTTGCTGAAGAAGAAATATGTATGTCCCCATCCC 1038
|.||.||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||.|||
Sbjct 1764 CTCACCCTCGCTATTTGCAGCACCACATTAAATACCAGCATTTGCTGAAAAAAAAATATGTATGTCCCCACCCC 1837
Query 1039 TCCTGTGGACGACTCTTCAGGCTTCAGAAGCAACTTCTGCGACATGCCAAACATCATACAGATCAAAGGGATTA 1112
||||||||.||||||||||||||.|||||.|||||||||||.|||||.||.|||||||||||.||.||||||||
Sbjct 1838 TCCTGTGGGCGACTCTTCAGGCTCCAGAAACAACTTCTGCGGCATGCAAAGCATCATACAGACCAGAGGGATTA 1911
Query 1113 TATCTGTGAATATTGTGCTCGGGCCTTCAAGAGTTCCCACAATCTGGCAGTGCACCGGATGATTCACACTGGCG 1186
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||||
Sbjct 1912 TATCTGTGAATATTGTGCTCGGGCCTTCAAGAGTTCCCACAATCTGGCAGTACACCGGATGATTCATACGGGCG 1985
Query 1187 AGAAGCCATTACAATGTGAGATCTGTGGATTTACTTGTCGACAAAAGGCATCTCTTAATTGGCACATGAAGAAA 1260
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1986 AGAAGCCATTACAATGTGAGATCTGTGGATTTACTTGTCGACAAAAAGCATCTCTTAATTGGCACATGAAGAAA 2059
Query 1261 CATGATGCAGACTCCTTCTACCAGTTTTCTTGCAATATCTGTGGCAAAAAATTTGAGAAGAAGGACAGCGTAGT 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 2060 CATGATGCAGACTCCTTCTACCAGTTTTCTTGCAATATCTGTGGCAAAAAATTTGAGAAGAAGGACAGTGTAGT 2133
Query 1335 GGCACACAAGGCAAAAAGCCACCCTGAGGTGCTGATTGCAGAAGCTCTGGCTGCCAATGCAGGCGCCCTCATCA 1408
|||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||
Sbjct 2134 GGCACACAAAGCAAAAAGCCACCCTGAGGTGCTGATTGCAGAAGCTCTGGCAGCCAATGCGGGCGCCCTCATCA 2207
Query 1409 CCAGCACAGATATCTTGGGCACTAACCCAGAGTCCCTGACGCAGCCTTCAGATGGTCAGGGTCTTCCTCTTCTT 1482
||||||||||||||||||||||||||||||||.|||||||.||||||.|||||||||||||.||||||||||||
Sbjct 2208 CCAGCACAGATATCTTGGGCACTAACCCAGAGCCCCTGACACAGCCTGCAGATGGTCAGGGGCTTCCTCTTCTT 2281
Query 1483 CCTGAGCCCTTGGGAAACTCAACCTCTGGAGAGTGCCTACTGTTAGAAGCTGAAGGGATGTCAAAGTCATACTG 1556
|||||||||||||||||||||||..|||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 2282 CCTGAGCCCTTGGGAAACTCAACAGCTGGAGAGTGCCTACTGCTAGAAGCTGAAGGGATGTCAAAGTCATACTG 2355
Query 1557 CAGTGGGACGGAACGGGTGAGCCT------GATGGCT------GATGGGAA----------------------- 1595
|||||||||.||||||.||| | ||||||| || |.||
Sbjct 2356 CAGTGGGACAGAACGGTTGA---TTTAGGGGATGGCTTTCGCAGA--GCAATCACCTCTGACCCTTCACCGCCG 2424
Query 1596 -GATCTTTGTGGGAAGCGGC-----------AGCAGTGGAGGCA-------------CTGAAGGGCTG--GTTA 1642
||.||.||| |||.|| |||| |||.| |||| ||| .|||
Sbjct 2425 GGACCTCTGT----AGCCGCTCTATCTGGCTAGCA----AGGAAGATTCGTTCAGACCTGA----CTGCTCTTA 2486
Query 1643 TGAACTC---------------------------AGATAT--------ACTC-------GGTGCTACCA----C 1670
||.|.|| |.|||| |||| |||| ||||| |
Sbjct 2487 TGGAATCTTATGTAAAACATCAAGGCCTGAATAAAAATATCAGCCTTGACTCAGTGGATGGTG-TACCAGTGGC 2559
Query 1671 AGAG----GTTC------------TGATTGA---AGA-----------------TTCAGACTCTGCCGGACCT- 1707
| || |.|| |||.||| ||| |.|||.|| |.|||.||||
Sbjct 2560 A-AGCACTGATCGCTGGAGTGAGATGACTGAGGCAGAGCGACTCCAAGAGAACCTCCAGGCT-TACCGTACCTT 2631
Query 1708 -------------------------------------------------------------------------- 1707
Sbjct 2632 CCAAGGGATGTTAACCAAGCTTTTAGAAGACCAGAGAGTGCATTTCACCCCGACTGAAGGTGACTTCCATCAGG 2705
Query 1708 -------------------------------------------------------------------------- 1707
Sbjct 2706 CAATACATACTCTTACGCTCCAAGTTTCTGCCTTCGCCTACCAGCTAGAGGAGTTAATGGCGCTTCTGGAACAG 2779
Query 1708 -------------------------------------------------------------------------- 1707
Sbjct 2780 AAGGTCCCTGAAAAAGAGGCTGATGGGATGCCTGTCACAATTGGAGATGGTGGCCTCTTTGAGAAGAAGCTGTG 2853
Query 1708 -------------------------------------------------------------------------- 1707
Sbjct 2854 GGGCTTGAAGGTCCTTCAAGAGCTTTCACAGTGGACTGTGAGGTCTATCCATGACCTCCGTGTCATTTCTTCTC 2927
Query 1708 -------------------------------------------------------------------------- 1707
Sbjct 2928 ATCACATGGGAATCTCAGCACATGAGAGCCATTATGGGGCCAAGCAAATGTAGCTCTTAACTCTTGCCTCTGTC 3001
Query 1708 -------------------------------------------------------------------------- 1707
Sbjct 3002 TCCCTCTTTGATCTAATGGGATATCAGTAGTTCCCCAGGGGCCTAGTTTTCTCAGCATCAATTTTGGAAAACCT 3075
Query 1708 -------------------------------------------------------------------------- 1707
Sbjct 3076 TAGACCACAGGCATATTTCGTCAAGTAGGGTTGACCCACGTATGAACAGAAGATAAACATGGTTATTCTGGCTG 3149
Query 1708 -------------------------------------------------------------------------- 1707
Sbjct 3150 TGCATATGTGTGTACATGATTTTGTTTGTATTGGTGGTATAATAAAGTATAATTAGGGCATTATCCTTCCACCT 3223
Query 1708 -------------------------------------------------------------------------- 1707
Sbjct 3224 TAGTGCTTTACCCTTCCTGATACTAAATAACCTTTCCAGGTGTTTAACAGTCTTACAGGCAGAAGAGACATTGT 3297
Query 1708 ----------------------------------------------------- 1707
Sbjct 3298 GACTAGTTTTGGTTGACTTCTGAAAAGACTGAATAAACAAATTGGAAGTCCTA 3350
