Nucleotide Global Alignment

Description

• Query: TRCN0000473045
• Subject: XR_001748015.2
• Aligned Length: 1539
• Identities: 946
• Gaps: 549

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGTGTGAGCAAGAATTTCCTGCGGTTCCTCTAGGAAAATTCCTTTGTGCAGATCAGGCCCGTGGATTGGTGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGAATCCTAACCACGTCTTCCCTGGCCTGTCTTCACTCTTCTCCCCAGAATCACCACTTCTGCACTGGTGTCTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGGTGTATTGAGTGATTTTGTGGAGGGCAGAAGTAGGAAGTCTTTGGGACAAAACTGTATTTACCTTGGGATC  222

Query    1  --------------------------------------------------------ATGGCTTCTGGAATCCTG  18
                                                                    ||||||||||||||||||
Sbjct  223  TGTGAACAAGAGGAACCTCAGCAGCCAGGACAGGCAGGAGCAGTGGAATAGCTACTATGGCTTCTGGAATCCTG  296

Query   19  GTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGG  92
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGG  370

Query   93  CCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCATGCTAGACAAAGGAGAGAGTAGCTGCC  166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCATGCTAGACAAAGGAGAGAGTAGCTGCC  444

Query  167  CTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTC  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTC  518

Query  241  AGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTT  314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTT  592

Query  315  CTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCC  388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCC  666

Query  389  TCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAG  462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAG  740

Query  463  GAAGCTGAAGAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAAC  536
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAAGCTGAAGAGTTAGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAAC  814

Query  537  CAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGG  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGG  888

Query  611  AGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCCTG  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCCTG  962

Query  685  AGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCGT  758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCGT  1036

Query  759  CATAAAAAG----GACGGAGA------ACGTGAC--------CT--------TGAAGA-AGCCAG---------  796
            |||||||||    |||  |||      |||..||        ||        |||||| || |||         
Sbjct 1037  CATAAAAAGAGCTGAC--AGATGTCCGACGCTACTGGGAAGACTAGATGAGATGAAGAGAG-CAGTTGTCACAT  1107

Query  797  -------AAACT--------------------------------TTTCCAAAAAATCA------AAGGAG----  821
                   |||.|                                |.||||.|.|||||      ||.|||    
Sbjct 1108  CTGGGTAAAAGTCTCATCATCAGGGCAAAGAACAGGTGGGAATGTATCCAGAGAATCAACATACAATGAGCAAA  1181

Query  822  AGTG-----TTTC---GAGCT----CCTGA--------------------------TCTGA--AAGGAA-----  850
            ||||     ||||   || ||    |||.|                          |||||  ||||||     
Sbjct 1182  AGTGAAGCTTTTCCTAGA-CTTGACCCTCATCAAATCTCCTCTGTCCCCACTCTCTTCTGAAGAAGGAAAGGTC  1254

Query  851  TGCTAGAA-----GT---GTTTAGAGAG-CTGACAGATGTCCGACGCTACTGGGGT------------------  897
            ||.| |||     ||   |.|||..||| ||  ||||..||..|  ||||.|||.|                  
Sbjct 1255  TGAT-GAATACATGTAAAGCTTATTGAGCCT--CAGAACTCTAA--CTACAGGGTTTCAATAGCACAGAAACTC  1323

Query  898  ----AAGGAGAAGTCACATTATCATAAG--CCACCCT---GCGGCTTAT------CATTATT---------ATT  947
                |||.|.|||    |.|.||| |||  ||.||||   |.|.||.||      ||  |.|         |||
Sbjct 1324  TGAGAAGAAAAAG----AATGTCA-AAGTTCCTCCCTAAGGAGACTGATTAGATGCA--AGTGTGTCCGGAATT  1390

Query  948  ------ATCTT----TATCTTTTAGAAT-------------TTTATGTTCTCTATTAGGCTCATGT--TTTAAG  996
                  .||||    |..|||..|||||             .|.|.|.|...|||||    || ||  ||.|||
Sbjct 1391  GGTGGGTTCTTGGTCTGACTTCAAGAATGAAGCCGCGGACCCTCACGGTGAGTATTA----CA-GTTCTTGAAG  1459

Query  997  A--------------TTTATGATTCTCCTTCCAAGACACACATAACTTACCCCTCCTTA  1041
            |              |||.|     ||||||..|                         
Sbjct 1460  ACTGCGTGTCCAGAGTTTGT-----TCCTTCTGA-------------------------  1488