Nucleotide Global Alignment

Description

• Query: TRCN0000473045
• Subject: XR_001748018.2
• Aligned Length: 1497
• Identities: 927
• Gaps: 517

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGTGTGAGCAAGAATTTCCTGCGGTTCCTCTAGGAAAATTCCTTTGTGCAGATCAGGCCCGTGGATTGGTGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGAATCCTAACCACGTCTTCCCTGGCCTGTCTTCACTCTTCTCCCCAGAATCACCACTTCTGCACTGGTGTCTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGGTGTATTGAGTGATTTTGTGGAGGGCAGAAGTAGGAAGTCTTTGGGACAAAACTGTATTTACCTTGGGATC  222

Query    1  --------------------------------------------------------ATGGCTTCTGGAATCCTG  18
                                                                    ||||||||||||||||||
Sbjct  223  TGTGAACAAGAGGAACCTCAGCAGCCAGGACAGGCAGGAGCAGTGGAATAGCTACTATGGCTTCTGGAATCCTG  296

Query   19  GTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGG  92
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGG  370

Query   93  CCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCATGCTAGACAAAGGAGAGAGTAGCTGCC  166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCATGCTAGACAAAGGAGAGAGTAGCTGCC  444

Query  167  CTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTC  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTC  518

Query  241  AGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTT  314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTT  592

Query  315  CTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCC  388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCC  666

Query  389  TCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAG  462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAG  740

Query  463  GAAGCTGAAGAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAAC  536
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAAGCTGAAGAGTTAGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAAC  814

Query  537  CAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGG  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGG  888

Query  611  AGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCCTG  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCCTG  962

Query  685  AGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAG-------GGTGTGG  751
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |.|| .|
Sbjct  963  AGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGAAGACTAGATG-AG  1035

Query  752  ATG------GC----GTCA--------TAAAA-----------AGGACGGAGAAC--GTG--------------  780
            |||      ||    ||||        |||||           |||.|..|||||  |||              
Sbjct 1036  ATGAAGAGAGCAGTTGTCACATCTGGGTAAAAGTCTCATCATCAGGGCAAAGAACAGGTGGGAATGTATCCAGA  1109

Query  781  ------ACCTTGAAGAAGCCA----GAAACTTTTCCAAAA---------AATCAAAGGAGAGTGTTTCGAGCTC  835
                  ||.|..||..|||.|    |||.|||||||.|.|         .||||||        |.||   |||
Sbjct 1110  GAATCAACATACAATGAGCAAAAGTGAAGCTTTTCCTAGACTTGACCCTCATCAAA--------TCTC---CTC  1172

Query  836  ----------CTGATCTGA--AAGGAA-----TGCTAGAA-----GT---GTTTAGAGAG-CTGACAGATGTCC  883
                      ||..|||||  ||||||     ||.| |||     ||   |.|||..||| ||  ||||..||.
Sbjct 1173  TGTCCCCACTCTCTTCTGAAGAAGGAAAGGTCTGAT-GAATACATGTAAAGCTTATTGAGCCT--CAGAACTCT  1243

Query  884  GACGCTACTGGGGT----------------------AAGGAGAAGTCACATTATCATAAG--CCACCCT---GC  930
            .|  ||||.|||.|                      |||.|.|||    |.|.||| |||  ||.||||   |.
Sbjct 1244  AA--CTACAGGGTTTCAATAGCACAGAAACTCTGAGAAGAAAAAG----AATGTCA-AAGTTCCTCCCTAAGGA  1310

Query  931  GGCTTAT------CATTATT---------ATT------ATCTT----TATCTTTTAGAAT-------------T  966
            |.||.||      ||  |.|         |||      .||||    |..|||..|||||             .
Sbjct 1311  GACTGATTAGATGCA--AGTGTGTCCGGAATTGGTGGGTTCTTGGTCTGACTTCAAGAATGAAGCCGCGGACCC  1382

Query  967  TTATGTTCTCTATTAGGCTCATGT--TTTAAGA--------------TTTATGATTCTCCTTCCAAGACACACA  1024
            |.|.|.|...|||||    || ||  ||.||||              |||.|     ||||||.          
Sbjct 1383  TCACGGTGAGTATTA----CA-GTTCTTGAAGACTGCGTGTCCAGAGTTTGT-----TCCTTCT----------  1436

Query 1025  TAACTTACCCCTCCTTA  1041
                             
Sbjct 1437  -----------------  1436