Nucleotide Global Alignment

Description

Query:
TRCN0000473064
Subject:
XM_006519015.2
Aligned Length:
1278
Identities:
796
Gaps:
387

Alignment

Query    1  ATGGAGCAGGGGCTGGAGGAGGAAGAAGAGGTGGATCCCCGGATCCAGGGAGAACTGGAGAAGTTAAATCAGTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CACGGATGATATCAACAGACGGGAGACTGAACTTGAGGATGCTCGTCAGAAGTTCCGCTCTGTTCTGGTTGAAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGGCA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CGGAGGGTGGCGAGGCAGGCTCAGCTGGAAGCTCAGAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGGTGCT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAGCGGCTGCTGGAGGATGACAAGCGGCAGTTCGACTCCG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CCTGGCAGGAGATGCTGAATCACGCCACTCAGAGGGTCATGGAGGCGGAGCAGACCAAGACCAGGAGCGAGCTG  444
                       ||||||||.||.||.||||||||||||||||||||.||||||||||||||.|||||.|||||.
Sbjct    1  -----------ATGCTGAACCATGCTACTCAGAGGGTCATGGAGGCCGAGCAGACCAAGACAAGGAGTGAGCTA  63

Query  445  GTGCATAAGGAGACGGCAGCCAGGTACAATGCCGCCATGGGCCGCATGCGACAGCTGGAGAAGAAACTCAAGAG  518
            ||.||.|||||||||||||||||||||||.||.||||||||.||||||||.|||||||||||||||||||||.|
Sbjct   64  GTACACAAGGAGACGGCAGCCAGGTACAACGCTGCCATGGGTCGCATGCGCCAGCTGGAGAAGAAACTCAAGCG  137

Query  519  AGCCATCAACAAGTCCAAGCCTTATTTTGAACTCAAGGCAAAGTACTATGTGCAGCTCGAGCAACTGAAAAAGA  592
            ||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.|||||||||||.||||
Sbjct  138  AGCCATCAACAAGTCCAAGCCTTATTTTGAGCTAAAGGCAAAGTACTACGTGCAGCTTGAGCAACTGAAGAAGA  211

Query  593  CTGTGGATGACCTGCAGGCCAAACTGACCCTGGCAAAAGGCGAGTACAAGATGGCCCTGAAGAACCTGGAGATG  666
            |.|||||||||||.||||||||.|||.||||||||||.||||||||||||...||||||||||.||||||||.|
Sbjct  212  CGGTGGATGACCTTCAGGCCAAGCTGGCCCTGGCAAAGGGCGAGTACAAGGCAGCCCTGAAGAGCCTGGAGAGG  285

Query  667  ATCTCAGATGAGATCCACGAGCGGCGGCGCTCCAGTGCCATGGGGCCTCGGGGATGCGGTGTTGGTGCTGAGGG  740
            ||||||||||||||.||||||||||||||.||||.||||||||||||.|||||.||.||.||.||.||.|||||
Sbjct  286  ATCTCAGATGAGATACACGAGCGGCGGCGTTCCAATGCCATGGGGCCCCGGGGCTGTGGCGTGGGGGCAGAGGG  359

Query  741  CAGCAGCACATCTGTGGAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGCCATTTCTGTGGCCTCGGAGGCCT  814
            |||||.|.|.||.||||||.|.|||||.|..|||||||||||||||||.||||||||||||||.||.||.||||
Sbjct  360  CAGCATCGCCTCAGTGGAGAACCTGCCTGTAAGCAAACCTGAGCCTGACGCCATTTCTGTGGCATCAGAAGCCT  433

Query  815  TTGAAGATGACAGCTGTAGCAACTTTGTGTCTGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTTTAGTTCA  888
            ||||||||||||.|||.||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.
Sbjct  434  TTGAAGATGACAACTGCAGCAACTTGGTGTCTGAAGATGACTCGGAAACCCAGTCTGTGTCCAGCTTTAGTTCG  507

Query  889  GGACCAACAAGCCCGTCTGAGATGCCTGACCAGTTCCCTGCGGTTGTGAGGCCTGGCAGCCTGGATCTGCCCAG  962
            |||||.||.||.||||||||.||||||||.|||||||||||.||.|..|||||||||||.|||||||||||.||
Sbjct  508  GGACCGACGAGTCCGTCTGAAATGCCTGATCAGTTCCCTGCAGTGGCAAGGCCTGGCAGTCTGGATCTGCCTAG  581

Query  963  CCCTGTGTCCCTGTCAGAGTTTGGGATGATGTTCCCAGTGTTGGGCCCTCGAAGTGAATGCAGCGGGGCCTCCT  1036
            ||||||||||||||||||.||||||||||||||||||.|..||||.|||||||||||||||||.||||||||||
Sbjct  582  CCCTGTGTCCCTGTCAGAATTTGGGATGATGTTCCCAATACTGGGTCCTCGAAGTGAATGCAGTGGGGCCTCCT  655

Query 1037  CCCCTGAATGTGAAGTAGAACGAGGAGACAGGGCAGAAGGGGCAGAGAATAAAACAAGTGACAAAGCCAACAAC  1110
            |||||||||||||.||.||||||||||||||.|||||||||||.||||||||||..||||||||||||||||||
Sbjct  656  CCCCTGAATGTGAGGTTGAACGAGGAGACAGAGCAGAAGGGGCCGAGAATAAAATGAGTGACAAAGCCAACAAC  729

Query 1111  AACCGGGGCCTCAGCAGTAGCA---GTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTCCCCTGAGGG  1181
            |||||.|..|||.||||.|.||   ||||||   |||||||.||.|.|||||||||||||||.||||.||||.|
Sbjct  730  AACCGTGTTCTCGGCAGCACCAACGGTGGCA---GTGGCAGGAGCAGGAGCCAAAGCAGCACGTCCCTTGAGAG  800

Query 1182  CCAGGCCTTGGAGAACCGGATGAAGCAGCTCTCCCTACAGTGCTCAAAGGGAAGAGATGGAATTATTGCTGACA  1255
            ||||||||||||.|.|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct  801  CCAGGCCTTGGAAACCCGGATGAAGCAGCTCTCCCTACAGTGCTCAAAAGGAAGAGATGGAATTATTGCTGACA  874

Query 1256  TAAAAATGGTGCAGATTGGC  1275
            ||||||||||||||||||||
Sbjct  875  TAAAAATGGTGCAGATTGGC  894