Nucleotide Global Alignment

Description

Query:
TRCN0000473121
Subject:
NM_001165956.1
Aligned Length:
2867
Identities:
343
Gaps:
2476

Alignment

Query    1  ------------------------------------ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC  38
                                                |||||||.|||.||.|.|.|.||||||   ||.|||||
Sbjct    1  ATGGCGGAAGCGGAGTTTAAGGACCACAGCACAGCTATGGATAGTGAGCCGAGCTCTGGAACA---TCCGTGTC  71

Query   39  AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG  112
            |||||||.|||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||
Sbjct   72  AACAACAGCCAGCAGTACCACCACCACCACCATCACCACATCCTCCTCCCGAATGCAGCAGCCACAGATCTCTG  145

Query  113  TCTACAGTGGTTCAGACCGACATGCTGT------------ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT  174
            |||||||.||.|||||||||||||||||            .|||||.||||||||||||||||||||.||.|||
Sbjct  146  TCTACAGCGGGTCAGACCGACATGCTGTTCAGGTAATTCAGCAGGCCTTGCATCGGCCCCCCAGCTCGGCAGCT  219

Query  175  CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA  248
            ||||||||.|||||.|||||.||.||.||.||.||||||.||||||||||.||.||.|||||.|||||||||||
Sbjct  220  CAGTACCTGCAGCAGATGTACGCGGCTCAGCAGCAGCACCTGATGCTGCACACGGCTGCTCTGCAGCAGCAGCA  293

Query  249  TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC  322
            ..||||||||||.|||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||.|
Sbjct  294  CCTAAGCAGCTCGCAGCTCCAGAGCCTTGCGGCTGTCCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCCC  367

Query  323  CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGT-AAGTTCCCTAAATTTTTTTTTCCTG--  393
            |||||||.|||||.|||||.|||||||||||||||||.||.|||.| ..||.|.|         ||.|||||  
Sbjct  368  CCACAGGCAGTGTTACACAACAGTCAAGTATGTCCCAGACATCTATCCTGTCCGC---------TTCTCCTGCA  432

Query  394  -----------GATTTAAA----------------ATTT-----------------------------------  405
                       ||  |.||                |.||                                   
Sbjct  433  CCTGCTCAGCTGA--TGAACCGCTCCCAGACGTCCAGTTCTACCAGCGGCAGTATTACCCAGCAGACTATGCTA  504

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  505  CTCGGGAGTACCTCTCCCACCCTAACTGCCAGCCAAGCCCAGATGTATCTCCGAGCTCAGATGCTGATTTTCAC  578

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  579  ACCTGCTACCACTGTGGCTGCTGTACAGTCTGACATCCCTGTTGTCTCGTCGTCACCGTCACCTTCCTGTCAGT  652

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  653  CTGCAGCTGCTCAGGTTCAGAATTTAACCTTACGCAGCCAGAAGCTGGGTGTCTTATCTAGCTCACAGAATGGC  726

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  727  TCACCAAAAAGCGCTGGTCAAACCCAGTCCTTGACAATTTGCCATAATAAAACAACAGTGACCAGTTCTAAAAT  800

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  801  CAGCCAACGAGACCCTTCTCCAGAGAGCAAGAAGGGAGGAAGCCCAGGTCTGGAATCTCGGAGCACGGCCGTCA  874

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  875  CTCGGACATCAAGCATCCACCAGTTAATAGCACCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAATCAAA  948

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  949  CATCAGCAGATTCCTCTTCATTCACCACCTCCTAAAGTTTCCCATCATCAGCTGCTATTACAACAGCAACAACA  1022

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1023  GCAAATTCAGCCAATCACCCTTCAGAGTCCAAGTCAAGATCCACCCCCATCCCAGCACTGTATCCCACTCCCAA  1096

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1097  ACCATGGCCTTTCTCCGGCTCCCAGTAATGCCCAGCCGCAGCATTGCTCCCCAGTTCAGAGCCATCCTCCGCCT  1170

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1171  TTAACTGTGTCTCCCAACCAGGCACAGTCCGCACAGCAGTCTGTAGTGGTGTCTCCTCCCCCCCCTCATTCCCC  1244

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1245  AAGTCAGTCTCCTACTATAATTATCCATCCACAAGCACTTATCCAGCCACACCCTCTTGTGTCTTCAGCTCTTC  1318

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1319  AAACAGGGCCAAATTTGCAGCAGATGGTGTCCCCAACATCACACCAGCAGTATTCAGCCCTACAGTCCTCTCCA  1392

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1393  ATTCCCATCGCGACCCCTCCACAGATGTCGGCATCTCCTCCAGCTCAGCTCCCACCACTGCCCTTGCAGTCTAT  1466

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1467  GCAGTCTTTACAAGTGCAGCCTGAAATTCTATCCCAGGGCCAGGTTTTGGTGCAGAATGCTTTGGTGTCAGAAG  1540

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1541  AGGAGCTACCTGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTCCACAGACTGTTGCGGTA  1614

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1615  AATCTACAAGTACAGCCGCCAGCACCTGTTGATCCACCAGTGGTTTATCAAGTAGAAGATGTGTGTGAGGAAGA  1688

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1689  AATGCCAGAGGAGTCCGATGAGTGTGCAAGGATGGACAGAACCCCCCCACCCCCCACCTTGTCTCCAGCAGCTG  1762

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1763  TCACTGTGGGGAGGGGAGAGGACTTGACATCCGAACATCCTTTGTTAGAGCAAGTGGAGTTGCCTGCTGTGGCC  1836

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1837  TCAGTCAGTGCTTCCGTGATCAAGTCTCCATCAGACCCCACCCATGCCTCTGCTCCTGCACCTCCCCTCTTAAT  1910

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1911  CCCTGCTGCCTCCACCAGGAGCAGCAGCACTTCTCTGGCCAGCAGCACTCCCAGCCTGGAAAACAAGCCTCCAC  1984

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1985  AGGCTATTGTGAAACCACAGATTTTGACCCACGTTATAGAAGGCTTTGTGATTCAGGAGGGGCTGGAGCCGTTT  2058

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2059  CCTGTGAGTCGATCATCACTGCTGATAGAACAACCTGTGAAGAAGAGGCCTCTCTTGGATAATCAGGTGGTAAA  2132

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2133  CTCTGTGTGTGTCCAGCCAGAGTTACAGAATAACACAAAGCATGCAGATAACTCATCCGACACAGAGATAGAAG  2206

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2207  ACATGATGGCTGAAGAGACATTGGAAGAAATGGATAGCGAGTTACTCAAGTGTGAATTCTGTGGAAAAATGGGA  2280

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2281  TATCCTAATGAATTTTTACGGTCCAAACGATTCTGTACTATGTCATGTGCCAAAAGGTACAACGTTAGCTGTTC  2354

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2355  TAAAAAATTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAGAGTCTTGGGCATCGGGGCCGTCGTCCAA  2428

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2429  GTGGCCCTGAAGGGGCAGCAAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATCCATCTGCAGAAGAAGAC  2502

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2503  GTGGCCTCTCATGAAGATCCTGTGCCTTCTGCTATGACGACCCGTCTGCGAAGGCAGAGCGAGCGGGAAAGAGA  2576

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2577  GCGAGAGCTTCGGGATGTGAGGATTAGGAAGATGCCTGAGAATAGTGACTTGCTCCCAGTCGCACAGACTGAGC  2650

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2651  CCTCCATATGGACAGTCGACGACGTCTGGGCCTTCATCCATTCTTTGCCCGGCTGCCAGGACGTTGCAGATGAG  2724

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2725  TTCAGGGCACAAGAGATTGATGGGCAGGCCCTGCTCTTGCTAAAAGAAGACCATCTCATGAGTGCAATGAACAT  2798

Query  406  -------------------------------------------------------  405
                                                                   
Sbjct 2799  GAAGCTGGGCCCAGCCCTGAAGATTTGTGCACGCATCAACTCTCTGAAGGACTCT  2853

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