Nucleotide Global Alignment

Description

Query:
TRCN0000473291
Subject:
XM_011250588.1
Aligned Length:
1186
Identities:
879
Gaps:
242

Alignment

Query    1  ATGGCCACGGTCATCCCCAGCCCCCTGAGCCTAGGCGAGGACTTCTACCGCGAGGCCATCGAGCACTGCCGCAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTACAACGCGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCTTCCTCGACTCGCAGACCGGCGTGGCCCAGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACAACTGCTACATCTGGATGGAGAAGACCCACCGCGGGCCGGGTTTGGCCCCGGGACAGATTTACACGTACCCC  222
                             |||||||||||||||||||||||.||||||||||||||||||||.|||||.||||||
Sbjct    1  -----------------ATGGAGAAGACCCACCGCGGGCCTGGTTTGGCCCCGGGACAGATCTACACTTACCCC  57

Query  223  GCCCGCTGTTGGAGGAAGAAACGGAGACTCAACATCCTGGAGGACCCCAGACTCAGGCCCTGCGAGTACAAGAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||||||||||||||
Sbjct   58  GCCCGCTGTTGGAGGAAGAAACGGAGACTCAACATCCTGGAGGACCCCAGGCTCCGGCCCTGCGAGTACAAGAT  131

Query  297  CGACTGTGAAGCACCCCTGAAGAAGGAGGGTGGCCTCCCGGAAGGGCCGGTCCTCGAGGCTCTACTGTGTGCAG  370
            |||.|||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.|
Sbjct  132  CGATTGTGAGGCACCTCTGAAGAAGGAGGGTGGCCTCCCGGAAGGGCCAGTCCTCGAGGCTCTGCTGTGTGCTG  205

Query  371  AGACGGGGGAGAAGAAGATTGAGCTGAAGGAGGAGGAGACCATTATGGACTGTCAGAAACAGCAGTTGCTGGAG  444
            ||||.||.||||||||..|.|||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct  206  AGACTGGAGAGAAGAAAGTGGAGCTGAAGGAGGAGGAGACCATCATGGACTGTCAGAAACAGCAGTTGCTGGAG  279

Query  445  TTTCCGCATGACCTCGAGGTGGAAGACTTGGAGGATGACATTCCCAGGAGGAAGAACAGGGCCAAAGGAAAGGC  518
            |||||||||||.||||||||.||||||||||||||.||||||||||||||||||||||||||.|.|||||||||
Sbjct  280  TTTCCGCATGATCTCGAGGTAGAAGACTTGGAGGAAGACATTCCCAGGAGGAAGAACAGGGCAAGAGGAAAGGC  353

Query  519  ATATGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCTGGAGGACCGAGACAAGCCGTATGTCTGTG  592
            |||||||||.||.||||||||.|||||||||||||||||.||||||||||||||||||||||||||.|||||||
Sbjct  354  ATATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGCATCCCTGGAGGACCGAGACAAGCCGTACGTCTGTG  427

Query  593  ATATCTGTGGGAAACGGTATAAGAACCGGCCGGGGCTCAGCTACCACTACACCCACACCCACCTGGCCGAGGAG  666
            |||||||||||||..|.||||||||||||||.||.|||||||||||.||||||||||||||||||||.||||||
Sbjct  428  ATATCTGTGGGAAGAGATATAAGAACCGGCCAGGACTCAGCTACCATTACACCCACACCCACCTGGCTGAGGAG  501

Query  667  GAGGGGGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCATAAACAGTTTTACAAAGA  740
            ||||||||||||.||.|.|||||||||||||||||.|||||||||||||||||||||||||       |.||||
Sbjct  502  GAGGGGGAGGAGCACACTGAACGCCACGCCCTGCCTTTCCACCGGAAAAACAACCATAAAC-------CCAAGA  568

Query  741  ATTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACAGC-CAAGAAGGTGCCCACGGTCATCCCCAACGGCTAC  813
            |                                   ||| |.|||.||    |||.|||||||||||.||||||
Sbjct  569  A-----------------------------------AGCACCAGATGG----CACTGTCATCCCCAATGGCTAC  603

Query  814  TGTGACTTCTGCCTGGGGGGCTCCAAGAAGACGGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACTGTGGGCG  887
            ||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  604  TGTGACTTTTGCCTGGGGGGCTCCAAGAAGACTGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACTGTGGGCG  677

Query  888  ATCAGGACACCCCTCGTGTTTACAATTCACGGTGAACATGACGGCAGCCGTGCGGACCTACCGCTGGCAGTGCA  961
            |||||||||.||||||||||||||.|||||||||||||||||.||.||.|||||||||||||||||||||||||
Sbjct  678  ATCAGGACATCCCTCGTGTTTACAGTTCACGGTGAACATGACCGCGGCTGTGCGGACCTACCGCTGGCAGTGCA  751

Query  962  TCGAGTGCAAATCCTGCAGCCTGTGCGGAACCTCCGAGAACGAC------------------------------  1005
            |.||.|||||.||||||||||||||.||.|||||.|||||.|||                              
Sbjct  752  TTGAATGCAAGTCCTGCAGCCTGTGTGGCACCTCGGAGAATGACGGTGCCAGCTGGGCGGGTCTCACCCCCCAG  825

Query 1006  GACCAGCTGCTGTTTTGTGATGACTGCGATCGGGGTTACCACATGTACTGCCTGAGTCCCCCCATGGCGGAGCC  1079
            ||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||.||.||||||||||||||
Sbjct  826  GACCAGCTGCTGTTCTGTGATGACTGCGATCGAGGTTACCACATGTACTGCCTGAGCCCTCCCATGGCGGAGCC  899

Query 1080  CCCGGAAGGGAGCTGGAGCTGTCACCTCTGTCTCCGGCACCTGAAGGAAAAGGCTTCTGCTTACATCACCCTCA  1153
            |||||||||||||||||||||.||||||||||||||||||.|||||||||||||.|||||||||||||||||.|
Sbjct  900  CCCGGAAGGGAGCTGGAGCTGCCACCTCTGTCTCCGGCACTTGAAGGAAAAGGCCTCTGCTTACATCACCCTGA  973

Query 1154  CC  1155
            ||
Sbjct  974  CC  975