Nucleotide Global Alignment

Description

Query:
TRCN0000473292
Subject:
XR_001753583.1
Aligned Length:
2461
Identities:
955
Gaps:
1478

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCCAGACCATCCCCCAACACCTCCCTGAAATTCCTGCAAGGTCAGGCCGATCTCAGGCTCTGACTCCTTTCACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCTTTCTGGTGATGTGATCTTACCCAGCTTCCTGTTTGTCTTCCTGAGAGACAGTAGATTTAGAAAGTGAGG  148

Query    1  -------------------------------------------------------------------ATGAGTG  7
                                                                               |||||||
Sbjct  149  ATCAGAGGGTGGAAAATAAAAGCTGTGGTCCCCAGGAGTCCTGAACATCTGGGGACAGCGGGAAAACATGAGTG  222

Query    8  ACTCCAAGGAACCAAGACTGCAGCAGCTGGGCCTCCTGGAGGAGG----AACAGCTGAGAGGCCTTGGA----T  73
            ||||||||||||||||..||||||||||||||||||||||.||.|    ||||.| .||.|||.|..||    |
Sbjct  223  ACTCCAAGGAACCAAGGGTGCAGCAGCTGGGCCTCCTGGAAGAAGATCCAACAAC-CAGTGGCATCAGACTTTT  295

Query   74  TCCGACAGAC-------TCGAG--GATACAAGAGCTTAGCAGGGTGTCTTGGCCATGGTCCCCTGGTGCTGCAA  138
            |||.|.||||       ||.||  ||||||                   ||||||                |||
Sbjct  296  TCCAAGAGACTTTCAATTCCAGCAGATACA-------------------TGGCCA----------------CAA  334

Query  139  CTCCTCTCCTTCACGCTCTTGGCTGGGCTCCTTGTCCAAGTGTCCAAGGTCCCCAGCTCCATAAGTCAGGAACA  212
            ...||||.|                             ||||||||||||||||||||||.|||||||||||||
Sbjct  335  GAGCTCTAC-----------------------------AGTGTCCAAGGTCCCCAGCTCCCTAAGTCAGGAACA  379

Query  213  ATCCAGGCAAGACGCGATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCA  286
            ||||..|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  380  ATCCGAGCAAGACGCAATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCA  453

Query  287  AGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTG  360
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||.||||||
Sbjct  454  AGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTG  527

Query  361  CAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGA  434
            ||||||||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||.|||||||||||
Sbjct  528  CAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGA  601

Query  435  GATCTACCAGGAGCTGACCTGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCT  508
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  602  GATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCT  675

Query  509  ACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAG  582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  676  ACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAG  749

Query  583  GAGCTGACGGAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCT  656
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  750  GAGCTGACGGAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCT  823

Query  657  GACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGACCAGTCCAAGCAGCAGCAAATCTATCAAGAACTGACCG  730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  824  GACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGACCAGTCCAAGCAGCAGCAAATCTATCAAGAACTGACCG  897

Query  731  ATTTGAAGACTGCATTT---------------------------------------------------------  747
            |||||||||||||||||                                                         
Sbjct  898  ATTTGAAGACTGCATTTGGTGAGTTCCTGCACATCAAGGGTCCTTGGGCCTGAGATGGTCTCTGTGTGATGTGA  971

Query  748  --------------------------------------------------------------------------  747
                                                                                      
Sbjct  972  CTTTACTTGAGTTACCAACCCTGCCTGAGCCTCAGTTTCCTCCCCTGTGAAATGAGAACACGGGGTAACTGCGA  1045

Query  748  --------------------------------------------------------------------------  747
                                                                                      
Sbjct 1046  TCATTGCACTTGGTGTTCACAGTGGGCCAGGCACACAGTAGACACTCAGTTCAACCAATCCGCTGCCTTCTGTT  1119

Query  748  --------------------------------------------------------------------------  747
                                                                                      
Sbjct 1120  CTGAGCTCTAAAGCTGCTAATTCTCCCAGTCTGGAAGAGATGGAGCCAGGACTCCTGGGTTCTCCTGGGGATCA  1193

Query  748  --------------------------------------------------------------------------  747
                                                                                      
Sbjct 1194  GGGAGAGTCTTGGGAAGTAGGGAGAGGAATGGTCTCTCCCCATTCCAAGCGGTCCACCCAACATGGACAGTCAA  1267

Query  748  --------------------------------------------------------------------------  747
                                                                                      
Sbjct 1268  GGAAGGGCCCTGATTTTCAAGGGCTTGAAGGCTGGGCAGATATGGGAATATGGACAACCTAATCTGAGCCCAGC  1341

Query  748  ---------------------GAACGCCTGTGCCGCCACTGTCCCAAGGACTGGACATTCTTCCAAGGAAACTG  800
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1342  CCTGACCAGCCTCCCCCAACAGAACGCCTGTGCCGCCACTGTCCCAAGGACTGGACATTCTTCCAAGGAAACTG  1415

Query  801  TTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCGTCACCGCCTGCCAGGAAGTGAGGGCCCAGCTCG  874
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1416  TTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCGTCACCGCCTGCCAGGAAGTGAGGGCCCAGCTCG  1489

Query  875  TCGTAATCAAAACTGCTGAGGAGCAGAACTTCCTACAGCTGCAGACTTCCAGGAGTAACCGCTTCTCCTGGATG  948
            |||||||||||||||||||||||                                                   
Sbjct 1490  TCGTAATCAAAACTGCTGAGGAG---------------------------------------------------  1512

Query  949  GGACTTTCAGACCTAAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTCACCCAGCTTCCAGCG  1022
                                                                          ||||||||||||
Sbjct 1513  --------------------------------------------------------------CAGCTTCCAGCG  1524

Query 1023  GTACTGGAACAGTGGAGAACCCAACAATAGCGGGAATGAAGACTGTGCGGAATTTAGTGGCAGTGGCTGGAACG  1096
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1525  GTACTGGAACAGTGGAGAACCCAACAATAGCGGGAATGAAGACTGTGCGGAATTTAGTGGCAGTGGCTGGAACG  1598

Query 1097  ACAATCGATGTGACGTTGACAATTACTGGATCTGCAAAAAGCCCGCAGCCTGCTTCAGAGACGAA---------  1161
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct 1599  ACAATCGATGTGACGTTGACAATTACTGGATCTGCAAAAAGCCCGCAGCCTGCTTCAGAGACGAATAGTTGTTT  1672

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1673  CCCTGCTAGCCTCAGCCTCCATTGTGGTATAGCAGAACTTCACCCACTTGTAAGCCAGCGCTTCTTCTCTCCAT  1746

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1747  CCTTGGACCTTCACAAATGCCCTGAGACGGTTCTCTGTTCGATTTTTCATCCCCTATGAACCTGGGTCTTATTC  1820

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1821  TGTCCTTCTGATGCCTCCAAGTTTCCCTGGTGTAGAGCTTGTGTTCTTGGCCCATCCTTGGAGCTTTATAAGTG  1894

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1895  ACCTGAGTGGGATGCATTTAGGGGGCGGGCTTGGTATGTTGTATGAATCCACTCTCTGTTCCTTTTGGAGATTA  1968

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1969  GACTATTTGGATTCATGTGTAGCTGCCCTGTCCCCTGGGGCTTTATCTCATCCATGCAAACTACCATCTGCTCA  2042

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 2043  ACTTCCAGCTACACCCCGTGCACCCTTTTGACTGGGGACTTGCTGGTTGAAGGAGCTCATCTTGCAGGCTGGAA  2116

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 2117  GCACCAGGGAATTAATTCCCCCAGTCAACCAATGGCATCCAGAGAGGGCATGGAGGCTCCATACAACCTCTTCC  2190

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 2191  ACCCCCACATCTTTCTTTGTCCTATACATGTCTTCCATTTGGCTGTTTCTGAGTTGTAGCCTTTATAATAAAGT  2264

Query 1162  -------------------  1161
                               
Sbjct 2265  GGTAAATGTTGTAACTGCA  2283

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