Nucleotide Global Alignment

Description

• Query: TRCN0000473348
• Subject: XM_017028707.1
• Aligned Length: 852
• Identities: 547
• Gaps: 270

Alignment

Query   1  ATGG------TGCTGATCAAGGAATTCCGTGTGGTTTTGCCATGTTCTGTTCAGGAGTATCAGGTTGGGCAGCT  68
           ||||      ||.||||..||.|.|.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGGGAGATTTGTTGATGGAGAAGTGCCGTGTGGTTTTGCCATGTTCTGTTCAGGAGTATCAGGTTGGGCAGCT  74

Query  69  TTACTCTGTTGCAGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAAAGAATGAACCTT  142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  TTACTCTGTTGCAGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAAAGAATGAACCTT  148

Query 143  ATGAGAAGGATGGAGAAAAGGGACAGTATACGCACAAAATTTATCACCTAAAGAGCAAAGTGCCTGCATTCGTG  216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  ATGAGAAGGATGGAGAAAAGGGACAGTATACGCACAAAATTTATCACCTAAAGAGCAAAGTGCCTGCATTCGTG  222

Query 217  AGGATGATTGCTCCCGAGGGCTCCTTGGTGTTTCATGAGAAAGCCTGGAATGCGTACCCCTACTGTAGAACAAT  290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  AGGATGATTGCTCCCGAGGGCTCCTTGGTGTTTCATGAGAAAGCCTGGAATGCGTACCCCTACTGTAGAACAAT  296

Query 291  TGTAACGAATGAATATATGAAAGATGATTTCTTCATTAAAATCGAAACATGGCACAAACCAGACTTGGGAACAT  364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297  TGTAACGAATGAATATATGAAAGATGATTTCTTCATTAAAATCGAAACATGGCACAAACCAGACTTGGGAACAT  370

Query 365  TAGAAAATGTACATGGTTTAGATCCAAACACATGGAAAACTGTTGAAATTGTCCATATAGATATTGCAGATAGA  438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371  TAGAAAATGTACATGGTTTAGATCCAAACACATGGAAAACTGTTGAAATTGTCCATATAGATATTGCAGATAGA  444

Query 439  AGTCAAGTTGAACCAGCAGACTACAA-----AGCTGATGAAGACCCA-GCATTATTCCAGTCAGT--CAAGACC  504
           ||||||||||||||||||| |.|.||     || ||.|.|     || ||||.|.|.|.|   ||  .||||.|
Sbjct 445  AGTCAAGTTGAACCAGCAG-CGAAAATGGGCAG-TGTTTA-----CAGGCATGAATGCTG---GTGGAAAGAGC  508

Query 505  AAGAG--AGGCCCTTTGGGACCCAACTGGAAGAA----GGAGCTGGCAAACAGCCCTGACTGTCCCCAGATGTG  572
            ||||  |||.|...|.|.||        |||||    ||||          ||||||               |
Sbjct 509  -AGAGTAAGGGCAGATTGCAC--------AAGAACCGTGGAG----------GCCCTG---------------G  548

Query 573  TGCCTATAAGCTGGTGACCA--TCA------AATTCA-AGTGGTG----GGGACTGCAAAGC---AAAGTAGAA  630
           |.||.||.|.||     |||  |||      |.|||| ||.||.|    ||.|||| .|.||   |.||.||  
Sbjct 549  TTCCCATCACCT-----CCACCTCAGCACAGACTTCAGAGAGGAGAGGAGGCACTG-GATGCATGACAGCAG--  614

Query 631  AACTTCATTCAAAAGCAAGAAAAACGGATATTTACAAACTTCCATCGCCAGCTTTTTTGTTGGATTGACAAGTG  704
           .|||                                                                      
Sbjct 615  CACT----------------------------------------------------------------------  618

Query 705  GATCGATCTCACGATGGAAGACATTAGGAGAATGGAAGACGAGACTCAGAAAGAACTAGAAACATTACGTAATC  778
                                                                                     
Sbjct 619  --------------------------------------------------------------------------  618

Query 779  AAGGTCAAGTGAGGGGAACAAGCGCAGCCAGTGATGAG  816
                                                 
Sbjct 619  --------------------------------------  618