Nucleotide Global Alignment
Description
- Query:
- TRCN0000473348
- Subject:
- XR_001755190.1
- Aligned Length:
- 3123
- Identities:
- 816
- Gaps:
- 2307
Alignment
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 1 AGGCGCTGTGAGAGGCGGTAGCGGCGGCGGCGGCGGTGGTATCGGCGGCAGCTGTGAGGGGGTTCCGGGAAGAT 74
Query 3 GGTGCTGATCAAGGAATTCCGTGTGGTTTTGCCATGTTCTGTTCAGGAGTATCAGGTTGGGCAGCTTTACTCTG 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGTGCTGATCAAGGAATTCCGTGTGGTTTTGCCATGTTCTGTTCAGGAGTATCAGGTTGGGCAGCTTTACTCTG 148
Query 77 TTGCAGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAAAGAATGAACCTTATGAGAAG 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTGCAGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAAAGAATGAACCTTATGAGAAG 222
Query 151 GATGGAGAAAAGGGACAGTATACGCACAAAATTTATCACCTAAAGAGCAAAGTGCCTGCATTCGTGAGGATGAT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GATGGAGAAAAGGGACAGTATACGCACAAAATTTATCACCTAAAGAGCAAAGTGCCTGCATTCGTGAGGATGAT 296
Query 225 TGCTCCCGAGGGCTCCTTGGTGTTTCATGAGAAAGCCTGGAATGCGTACCCCTACTGTAGAACAATTGTAACGA 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCTCCCGAGGGCTCCTTGGTGTTTCATGAGAAAGCCTGGAATGCGTACCCCTACTGTAGAACAATTGTAACGA 370
Query 299 ATGAATATATGAAAGATGATTTCTTCATTAAAATCGAAACATGGCACAAACCAGACTTGGGAACATTAGAAAAT 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGAATATATGAAAGATGATTTCTTCATTAAAATCGAAACATGGCACAAACCAGACTTGGGAACATTAGAAAAT 444
Query 373 GTACATGGTTTAGATCCAAACACATGGAAAACTGTTGAAATTGTCCATATAGATATTGCAGATAGAAGTCAAGT 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTACATGGTTTAGATCCAAACACATGGAAAACTGTTGAAATTGTCCATATAGATATTGCAGATAGAAGTCAAGT 518
Query 447 TGAACCAGC----------------------------------------------------------------- 455
|||||||||
Sbjct 519 TGAACCAGCAGCGAAAATGGGCAGTGTTTACAGGCATGAATGCTGGTGGAAAGAGCAGAGTAAGGGCAGATTGC 592
Query 456 -------------------------------------------------------------------------- 455
Sbjct 593 ACAAGAACCGTGGAGGCCCTGGTTCCCATCACCTCCACCTCAGCACAGACTTCAGAGAGGAGAGGAGGCACTGG 666
Query 456 ---------------------------------------------------------------AGACTACAAAG 466
|||||||||||
Sbjct 667 ATGCATGACAGCAGCACTTGAGATAGGTGCTCCAGGTGGAAGGCACTGCACATGCAAAGGCTGAGACTACAAAG 740
Query 467 CTGATGAAGACCCAGCATTATTCCAGTCAGTCAAGACCAAGAGAGGCCCTTTGGGACCCAACTGGAAGAAGGAG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTGATGAAGACCCAGCATTATTCCAGTCAGTCAAGACCAAGAGAGGCCCTTTGGGACCCAACTGGAAGAAGGAG 814
Query 541 CTGGCAAACAGCCCTGACTGTCCCCAGATGTGTGCCTATAAGCTGGTGACCATCAAATTCAAGTGGTGGGGACT 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTGGCAAACAGCCCTGACTGTCCCCAGATGTGTGCCTATAAGCTGGTGACCATCAAATTCAAGTGGTGGGGACT 888
Query 615 GCAAAGCAAAGTAGAAAACTTCATTCAAAAGCAAGAAAAACGGATATTTACAAACTTCCATCGCCAGCTTTTTT 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCAAAGCAAAGTAGAAAACTTCATTCAAAAGCAAGAAAAACGGATATTTACAAACTTCCATCGCCAGCTTTTTT 962
Query 689 GTTGGATTGACAAGTGGATCGATCTCACGATGGAAGACATTAGGAGAATGGAAGACGAGACTCAGAAAGAACTA 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTTGGATTGACAAGTGGATCGATCTCACGATGGAAGACATTAGGAGAATGGAAGACGAGACTCAGAAAGAACTA 1036
Query 763 GAAACA-------------------------------------------------------------------- 768
||||||
Sbjct 1037 GAAACAATGCGTAAGAGGGGTTCCGTTCGAGGCACGTCGGCTGCTGATGTCTAGATGAGTCCCCTGTAGGGTCA 1110
Query 769 ------------------TTACGTAATCAAGGTCAAGTGAGGGGAACAAGCGCAGCCAGTGATGAG-------- 816
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGACAATGTCAAACTGTTTACGTAATCAAGGTCAAGTGAGGGGAACAAGCGCAGCCAGTGATGAGTGAAGAAG 1184
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1185 AATCTGACCAGTATCTTGCAGTGTTGACGTTTCCCAGATGTGTGCTTGTGATGATACACACACATGCACAGGTT 1258
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1259 CTCAACCACGTGTGTATATATGTATGTGTGCATATGTCTGTAGCTGTATATAAAGCGCATGTAGAGCTACAGAT 1332
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1333 CCAGATACACACACTTGTGTATATATGTACATACAGACATACTGAAGGGATTAGTACAATTTCTCCAAAGTACT 1406
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1407 GTACCTATCTTCAGCAAGAATGCAAAAGAAAATATTTTCAATATATATACCTGGAACAGATTTTAATAATTATC 1480
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1481 AGAGTAATACCATTAATGGACAAATTGACTGCAATGTAATACTAGCTGGTATGTTTCATAAATGTCAAGCTGTG 1554
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1555 GACCAACATATATAGCCTTTTATTATTTTTCTCTTCTTTTAAGTCAGTCTGTTATAAATTTTTTTTTAGTCCCA 1628
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1629 TAAGCAGTAGACTCCCACAGAAAATTTCTTCAAAATTTTTTGGTGTTCCAATGAATCTGGGATGTAAACTCTGA 1702
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1703 ATGTATTTATAACTATTTATTTCTGGATGGTCATTATCTTGTAGCCAAATTTGACAATATAAAGTAAGGAGCAA 1776
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1777 AGTTACAGGCCAGTTTTTACTTGTTTGCCCTGAGGGAAAAATCCTTTTAAAAAAAATTTCTGGTTTTTATTGGA 1850
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1851 TTTTTGTATTTTAAATTTCAAATATTTTTCTACATCAAACCTAGCAAAAATGGAGATGACGGTTTCTGATTTAT 1924
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1925 AATAAATACTAGACAGTTTTCAGGCTCCTGTTAGACAAACACATTGATGAAGAAATTAGTCTTAATAGGATTGT 1998
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1999 AGGCTGTGTAGAAAAGTTGGAAATATAGCACTTCATGGAGTCTTGTTTTGAAGATGACAGTTTTCTGTAACTAC 2072
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2073 AGCTTGGAAACTATGCAAATGGTCTAGATTCCTCAGAGCTCACATGATAGGATATAGTTAGTGATGACATTTTG 2146
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2147 CTCTTCTTGTGGGAACACACACTTCAAGGAGGAGATAGTGACTTTGAGATAGGAACAGTTTAAGATGCAGTGTG 2220
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2221 AGTCTGGCCTGCGTGCGGTGAGGAGGCCCCGCCAAGAGACTGGTGGACATCTGACTGTGGGATGTGCTCTCAAG 2294
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2295 TAGGACGTCATCAGGACAGATTCTGAATAGGCATCATGAGAGTGCTGGTCAGAAACGGCTGCCACTTTTTTTAA 2368
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2369 TTTAATTTTATTTTTTATTTAAAGGAAGGAACAATAGCTAGGTAAGATTTTTATCAGCTTTCTCTGTCTGAATC 2442
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2443 CAGTTTTTCCTCTGTCAGTCCTGGAAGCTTGAATAGAATTATATTGTTGAAGCCTTCAGGTCACAAACTGTCTT 2516
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2517 TTGTAACCTCCTGTCCCTCCTAAAACACGCCAACCCCTGCAGTCAAATCACATTAGTAATCTGATTTGCTGACA 2590
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2591 GTCCTGCCCTGCCTGCTCCTCGTTTTCCCACATGTCCTGCATCCCTCCCCCACTGGAGTGATTTCAGTGAATCA 2664
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2665 GACAAGGAAGGATGTGTAGGATCACTACTGCATTGCAATACCCTGTTATCCTCAGCAACAAAACCCACATTTCA 2738
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2739 TACATCCTTTGTGTACTCAGGATAAAGACTGATGTTTACTCTCTGGGCACTGTTGTAAGATAGGTTTTGTCAGA 2812
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2813 GCATAATCATTGTCTGCAAAGTGTTTGGTGCGAGGAAGATTATTGCTAATTTTGTGAAATAAAGAGTCTAGCCC 2886
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2887 TCTCCTTTTAATGAACTTAACTCTCGCTGGCATCTGTAGTATCATTGGGAGCTTAGGCGCACATGGAAATGAGA 2960
Query 817 -------------------------------------------------------------------------- 816
Sbjct 2961 GCCCGGCGCATGGATTTTAATGTTTTTCTAACAACTGTGGAGATTTGAGGGAATGTGTGGTGAATGTAAAATAC 3034
Query 817 -------------------------------------------------------------------------- 816
Sbjct 3035 CTAGTTTACTTGCCAGTCTCTTGTGTAAATTACAGTAAAACAAAGTAAATGAAATTTAAACAAAAAATAAATTT 3108
Query 817 --------------- 816
Sbjct 3109 GATCACAAAATGCCA 3123
