Nucleotide Global Alignment

Description

Query:
TRCN0000473421
Subject:
XM_011243682.2
Aligned Length:
3772
Identities:
297
Gaps:
3455

Alignment

Query    1  ATGGCTTCAGTTTGGAAGAGACTGCAGCGTGTGGGAAAACATGCATCCAAGTTCCAGTTTGTGGCCTCCTACCA  74
            ||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTTCAGTTTGGAAGCGACTGCAGCGTGTGGGAAAACATGCATCCAAGTTCCAGTTTGTGGCCTCCTACCA  74

Query   75  GGAGCTCATGGTTGAGTGTACGAAGAAATGGCAACCAGATAAACTGGTGGTAGTTTGGACCAGAAGAAGCCGAA  148
            ||||||.||||||||.|||||.|||||||||||||||||||||||||||||.||||||||.|||||||||||||
Sbjct   75  GGAGCTGATGGTTGAATGTACAAAGAAATGGCAACCAGATAAACTGGTGGTTGTTTGGACAAGAAGAAGCCGAA  148

Query  149  GGAAGTCTTCTAAGGCACATAGCTGGCAACCTGGAATAAAAAATCCCTATCGTGGTGTTGTTGTGTGGCCTGTT  222
            ||||||||||.|||||.||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct  149  GGAAGTCTTCCAAGGCTCACAGCTGGCAACCTGGAATAAAAAATCCATATCGTGGTGTTGTTGTTTGGCCTGTT  222

Query  223  CCTGAAAACATTGAAATCACTGTAACACTTTTTAAGGATCCTCATGCGGAAGAATTTGAAGACAAAGAGTGGAC  296
            |||||||||||||||||||||||.||.||.|||||||||||||||||.||||||||||||||||||||.|||||
Sbjct  223  CCTGAAAACATTGAAATCACTGTGACGCTGTTTAAGGATCCTCATGCAGAAGAATTTGAAGACAAAGAATGGAC  296

Query  297  ATTTGTTATAGAAAATGTAAGC----------------------------------------------------  318
            ||||||.||.||.|||| ||.|                                                    
Sbjct  297  ATTTGTCATTGAGAATG-AATCCCCTTCTGGTCGGAGGAAAGCTCTTGCCACCAGCAGCATTAACATGAAACAG  369

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct  370  TACGCAAGCCCCATGCCAACACAAACTGACGTCAAGTTAAAATTCAAGCCGCTGTCTAAGAAGGTCGTGTCTGC  443

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct  444  CACTCTCCAGTTCTCACTGTCCTGTATCTTCCTTCGGGAGGGAAAAGCAACGGATGAAGATATGCAGAGTTTGG  517

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct  518  CTAGTTTGATGAGTATGAAGCAGGCAGACATTGGCAATTTAGATGATTTCGAAGAAGATAATGAGGATGATGAC  591

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct  592  GAGAACCGTGTGAACCAAGAGGAGAAGGCGGCAAAAATTACAGAAATTGTAAACCAGTTGAATGCTCTGAGCAG  665

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct  666  CTTAGATGAAGATCAAGATGACTGCATAAAGCAAGCAAATGTGCCCTCAGCTAAATCAGCCAGTTCCTCTGAAG  739

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct  740  AACTTATAAACACACTTAACTTTTTGGATGAAGCACAAAAGGACTTGGCCACTGTGAATACCAATCCATTTGAT  813

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct  814  GAACCTGATGTAACAGAATTAAATCCATTTGGAGATCCTGACTCAGAAGAACCAATCACTGAAACAACTTCACC  887

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct  888  TAAAAAACCAGAAGAATCTTTTTATAATAACAGCTGTAATCCCTTTAAAGGTGTACAGACTCCACAGTATTTGA  961

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct  962  ACCCATTTGATGAACCAGAAACTTTTGTAATGATAAAGGATTCTCCACCCCAGTCTACACGAAGAAAAAACCTA  1035

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1036  AGACCTGTAGACATGAGCAAGTACCTCTATGCTGATAGTTCAAAGAGTGAAGAGGAACTGGATGAATCAAATCC  1109

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1110  TTTTTATGAGCCTAAGCCAACTTCTCCAAATAATTTGGTCAATACAGTTCAAGAAGGGGAAACTGAACGGAGAG  1183

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1184  TGAAAAGAAGGGCCCCAGCCCCGCCGGCCCCACTAGCCCCGCCAGCCCCGCCAGCCCCACCAGCCCTCACACCC  1257

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1258  AAGACTGGAGTAAATGAAAACACAGTTGTCTCTGCAGGGAAAGATCTCTCTACTTCTCCAAAGCCAAGCCCGAT  1331

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1332  ACCAAGTCCTGTTCTGGGGCAAAAGCCAAACGCTAGTCAGTCGCTGCTTGCATGGTGCAGAGAAGTTACAAAAA  1405

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1406  ACTACCGGGGCGTGAAAATCACCAACTTTACCACATCGTGGAGGAATGGCTTATCATTCTGTGCAATTTTACAC  1479

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1480  CACTTTAGACCAGACTTAATCGACTACAAGTCTCTGAATCCTCAAGATATTAAAGAAAACAACAAAAAGGCTTA  1553

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1554  CGATGGATTTGCCAGCATTGGAATTTCCCGTTTACTGGAACCTTCTGATATGGTTTTATTAGCAATCCCTGACA  1627

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1628  AACTGACTGTTATGACTTATCTCTATCAAATAAGGGCACATTTTAGCGGACAAGAACTAAATGTGGTTCAGATA  1701

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1702  GAGGAAAACAGCAGTAAGAGCACATATAAAGTTGGAAATTATGAGACAGACACAAACAGTTCTGTGGATCAAGA  1775

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1776  AAAGTTCTACGCTGAACTCAGCGATCTGAAGCGAGAGCCTGAACCTCACCAGCCTGCCCGTGGGGCTGTGGATC  1849

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1850  TGCTGTCGCAGGATGACTCTGTGTTTGTAACTGACAGTGGGGTGGGAGAGTCTGAAAGTGAACACCAGACTCCA  1923

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1924  GATGACCACCTTAGTCCAAGCACAGCCTCCCCTTACTACCGCAGGACTAAGAGTGACACGGAGCCCCAAAAGTC  1997

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 1998  GCAGCAGAGCTCCGCGAGGACTTCAGGGTCTGATGACCCTGGGTTAAGTTCTAGTACTGATTCAGCTCAAGCCC  2071

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2072  TGGCTTCCTTAGGCAAGAAGAGACTAAAAGCTGAGAACTTGGAACTAAGTGACTTATGTGTCAGTGACAAGAAG  2145

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2146  AAGGATGTGTCTCCACTCTCAGCTTACGAGCAAAAGCTTCAGACTGTACATGCCAGCAGTGATATGGAACAAGG  2219

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2220  GAAAATGGAGAAGTCCAGATCTTTAGAATGCAGATTGGATGGTGAATTGGCTATCACAAAGCCAAATGTATCCT  2293

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2294  CTCCTTCTAAACTTGGATATAACAGAGACACAGACTTCACGAAAAAACCATGTGCTTCTCTGAGGCAGATAGAG  2367

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2368  TCTGATCCAGATGCAGACAAGAGCACTTTAAATCATGCAGACCACCCCAACAAAGCAGTTCAGCACCGAATGTT  2441

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2442  GTCCAGACAAGAGGAGCTGAAAGAAAGAGCGAGAGTTCTGCTTGAGCAAGCAAGAAGAGATGCTGCTTTCAAGG  2515

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2516  TGGGGAGCAAGCATGGTGGCAGCGCAGCCCCTGCGCTCTGCAGCAGACAGCTAAATGATGTGAGGAACACGGGT  2589

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2590  TGCAAGAAGCACACAGTGTTCACAGTGAACACAGCGGTGATGGGGCGAAGGGGGCAGCAAGATGAAGAGAGACG  2663

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2664  TCGGCAGCTGAGAGAGAGGGCTCGTCAGCTAATAGCAGAAGCTCGATGCGGAGTGAAGATGTCAGAACTTCCCA  2737

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2738  GCTATGGTGAAATGGCTGCAGAAAAGTTGAAAGAAAGGTCAAAGGCATCTGGAGATGAAAATGATAATATTGAG  2811

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2812  ATAGATACTAACGAAGAGATTCCTGAAGGCTTTGTTGTAGGAGGTGGAGATGAACTTACTAATATAGAAAGTGA  2885

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2886  CCTTGATAATCCCGAGCAGAATAGTAAGGTGGTGGACTTGAGGCTGAAGAAGCTATTAGAAGCCCAGCCACAGG  2959

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 2960  TGGCAAACTTACTCCCCAGTGCTGCGCAGAAAGCTGTAACCGAGGCCTCCGAGCAAGGAGAAAAGAGTGGCGTG  3033

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 3034  GAAGATCTCCGGACTGAACGATTACAAAAAGCAACAGAACGTTTCAGAAATCCTGTTGTGTTTAACAAGGATTC  3107

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 3108  CACAGTCAGAAAGACTCAGCTCCAGTCTTTCAGTCAGTATGTTGAGAACAGACCAGAGATGAAAAGACAGAGAT  3181

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 3182  CAATACAGGAAGATACAAAGAGAGGAACTGAGGAGAAGGCAGAGATAACTGAAACTCAGAGGAAGCCATCAGAA  3255

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 3256  GATGAAGTACTTAATAAAGGGTTCAAAGACACCAGTCAGTATGTTGTAGGGGAATTGGCAGCACTGGAGAATGA  3329

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 3330  GCAGAAGCAAATTGACACCCGTGCCGCGCTGGTGGAGAAGCGCCTCCGCTATCTCATGGACACAGGAAGGAACA  3403

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 3404  CGGAAGAAGAGGAGGCGATGATGCAGGAATGGTTCATGCTGGTTAATAAGAAAAATGCCTTAATAAGGAGGATG  3477

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 3478  AACCAGCTTTCCCTCCTGGAAAAAGAGCATGACTTAGAACGAAGGTATGAGCTGCTGAACCGGGAGCTACGGGC  3551

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 3552  CATGCTAGCCATTGAAGACTGGCAGAAGACCGAGGCCCAGAAGCGACGGGAACAGCTCCTGCTGGATGAACTAG  3625

Query  319  --------------------------------------------------------------------------  318
                                                                                      
Sbjct 3626  TAGCCCTGGTGGACAAGCGAGACGCCCTTGTCAGGGACCTGGACGCCCAGGAGAAGCAGGCCGAAGAAGAAGAC  3699

Query  319  ------------------------------------------------------------------------  318
                                                                                    
Sbjct 3700  GAGCATTTGGAGCGAACTCTGGAGCAAAACAAAGGCAAGATGGCCAAGAAGGAGGAGAAGTGTGCTCTTCAG  3771

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